RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 CERKQ8TCT0 537 aa14.78□□□□□ -0.04
SNF8-214ENST00000515174 EIF2AK4Q9P2K8 1649 aaKnown RBP14.77□□□□□ -0.04
SNF8-214ENST00000515174 ANKRD50Q9ULJ7 1429 aa14.77□□□□□ -0.04
SNF8-214ENST00000515174 UNC13BO14795 1591 aa14.77□□□□□ -0.05
SNF8-214ENST00000515174 SIGLEC1Q9BZZ2 1709 aa14.76□□□□□ -0.05
SNF8-214ENST00000515174 PPP1R15AO75807 674 aaPredicted RBP14.76□□□□□ -0.05
SNF8-214ENST00000515174 TRIM52Q96A61 297 aa14.76□□□□□ -0.05
SNF8-214ENST00000515174 SIN3AQ96ST3 1273 aa14.76□□□□□ -0.05
SNF8-214ENST00000515174 DEPDC5O75140 1603 aa14.75□□□□□ -0.05
SNF8-214ENST00000515174 DUOX2Q9NRD8 1548 aa14.75□□□□□ -0.05
SNF8-214ENST00000515174 KIF15Q9NS87 1388 aa14.74□□□□□ -0.05
SNF8-214ENST00000515174 MLH3Q9UHC1 1453 aa14.73□□□□□ -0.05
SNF8-214ENST00000515174 RTEL1-TNFRSF6BF6WH68 1400 aa14.73□□□□□ -0.05
SNF8-214ENST00000515174 ANKRD30BQ9BXX2 1392 aa14.73□□□□□ -0.05
SNF8-214ENST00000515174 DISP3Q9P2K9 1392 aa14.72□□□□□ -0.05
SNF8-214ENST00000515174 KDM5DQ9BY66 1539 aa14.71□□□□□ -0.05
SNF8-214ENST00000515174 MROH1Q8NDA8 1641 aa14.71□□□□□ -0.05
SNF8-214ENST00000515174 RNF17Q9BXT8 1623 aaKnown RBP14.71□□□□□ -0.05
SNF8-214ENST00000515174 AFAP1Q8N556 730 aa14.71□□□□□ -0.05
SNF8-214ENST00000515174 CEP152O94986 1710 aa14.71□□□□□ -0.05
SNF8-214ENST00000515174 PZPP20742 1482 aa14.7□□□□□ -0.06
SNF8-214ENST00000515174 SPAG9O60271 1321 aaKnown RBP14.7□□□□□ -0.06
SNF8-214ENST00000515174 YEATS2Q9ULM3 1422 aa14.7□□□□□ -0.06
SNF8-214ENST00000515174 NEUROD1Q13562 356 aa14.7□□□□□ -0.06
SNF8-214ENST00000515174 ERBINQ96RT1 1412 aa14.69□□□□□ -0.06
SNF8-214ENST00000515174 SLC4A1APQ9BWU0 796 aaKnown RBP14.69□□□□□ -0.06
SNF8-214ENST00000515174 IQGAP3Q86VI3 1631 aa14.69□□□□□ -0.06
SNF8-214ENST00000515174 TONSLQ96HA7 1378 aa14.69□□□□□ -0.06
SNF8-214ENST00000515174 MAGI2Q86UL8 1455 aa14.69□□□□□ -0.06
SNF8-214ENST00000515174 REREQ9P2R6 1566 aa14.68□□□□□ -0.06
SNF8-214ENST00000515174 DIEXFQ68CQ4 756 aaKnown RBP14.68□□□□□ -0.06
SNF8-214ENST00000515174 PRDM15P57071 1507 aaPredicted RBP14.66□□□□□ -0.06
SNF8-214ENST00000515174 A2MP01023 1474 aa14.66□□□□□ -0.06
SNF8-214ENST00000515174 RPRD2Q5VT52 1461 aaKnown RBP14.65□□□□□ -0.06
SNF8-214ENST00000515174 NUP155O75694 1391 aa14.64□□□□□ -0.07
SNF8-214ENST00000515174 MYT1LQ9UL68 1186 aa14.64□□□□□ -0.07
SNF8-214ENST00000515174 DMRT2Q9Y5R5 561 aa14.64□□□□□ -0.07
SNF8-214ENST00000515174 SOCS7O14512 581 aa14.63□□□□□ -0.07
SNF8-214ENST00000515174 CEBPAP49715 358 aaPredicted RBP14.63□□□□□ -0.07
SNF8-214ENST00000515174 ILDR2Q71H61 639 aa14.63□□□□□ -0.07
SNF8-214ENST00000515174 ZC3H13Q5T200 1668 aaKnown RBP14.62□□□□□ -0.07
SNF8-214ENST00000515174 FER1L4A9Z1Z3 1794 aa14.62□□□□□ -0.07
SNF8-214ENST00000515174 TET3O43151 1660 aa14.61□□□□□ -0.07
SNF8-214ENST00000515174 VWDEQ8N2E2 1590 aa14.61□□□□□ -0.07
SNF8-214ENST00000515174 PKD2Q13563 968 aa14.61□□□□□ -0.07
SNF8-214ENST00000515174 FAM135AQ9P2D6 1515 aa14.61□□□□□ -0.07
SNF8-214ENST00000515174 CAMSAP1Q5T5Y3 1602 aa14.6□□□□□ -0.07
SNF8-214ENST00000515174 E9PCH4 1651 aa14.6□□□□□ -0.07
SNF8-214ENST00000515174 ATP10AO60312 1499 aa14.59□□□□□ -0.07
SNF8-214ENST00000515174 DHX29Q7Z478 1369 aaKnown RBP14.58□□□□□ -0.08
SNF8-214ENST00000515174 SPHKAPQ2M3C7 1700 aa14.58□□□□□ -0.08
SNF8-214ENST00000515174 AGLP35573 1532 aa14.57□□□□□ -0.08
SNF8-214ENST00000515174 UHRF1BP1Q6BDS2 1440 aa14.57□□□□□ -0.08
SNF8-214ENST00000515174 CLTCQ00610 1675 aaKnown RBP14.56□□□□□ -0.08
SNF8-214ENST00000515174 FOXD1Q16676 465 aa14.56□□□□□ -0.08
SNF8-214ENST00000515174 L3MBTL2Q969R5 705 aa14.56□□□□□ -0.08
SNF8-214ENST00000515174 ESF1Q9H501 851 aaKnown RBP14.56□□□□□ -0.08
SNF8-214ENST00000515174 EFCAB6Q5THR3 1501 aa14.56□□□□□ -0.08
SNF8-214ENST00000515174 PREX1Q8TCU6 1659 aa14.55□□□□□ -0.08
SNF8-214ENST00000515174 ABCC3O15438 1527 aa14.54□□□□□ -0.08
SNF8-214ENST00000515174 LMTK2Q8IWU2 1503 aa14.51□□□□□ -0.09
SNF8-214ENST00000515174 CFAP65Q6ZU64 1925 aaKnown RBP14.51□□□□□ -0.09
SNF8-214ENST00000515174 SPATA31D1Q6ZQQ2 1576 aa14.5□□□□□ -0.09
SNF8-214ENST00000515174 MROH2AA6NES4 1674 aa14.49□□□□□ -0.09
SNF8-214ENST00000515174 STRCQ7RTU9 1775 aa14.48□□□□□ -0.09
SNF8-214ENST00000515174 KIF3BO15066 747 aa14.48□□□□□ -0.09
SNF8-214ENST00000515174 PTPRTO14522 1441 aa14.48□□□□□ -0.09
SNF8-214ENST00000515174 PLA2R1Q13018 1463 aa14.46□□□□□ -0.09
SNF8-214ENST00000515174 CLTCL1P53675 1640 aa14.46□□□□□ -0.09
SNF8-214ENST00000515174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.091e-6■■■□□ 18.4
SNF8-214ENST00000515174 TRPM2O94759 1503 aa14.46□□□□□ -0.1
SNF8-214ENST00000515174 STAC3Q96MF2 364 aa14.45□□□□□ -0.1
SNF8-214ENST00000515174 SETD1BQ9UPS6 1966 aaKnown RBP14.45□□□□□ -0.1
SNF8-214ENST00000515174 KANK1Q14678 1352 aa14.45□□□□□ -0.1
SNF8-214ENST00000515174 NBPF8Q3BBV2 869 aa14.44□□□□□ -0.1
SNF8-214ENST00000515174 C3P01024 1663 aa14.43□□□□□ -0.1
SNF8-214ENST00000515174 CCDC144AA2RUR9 1427 aa14.43□□□□□ -0.1
SNF8-214ENST00000515174 EIF4G2P78344 907 aaKnown RBP eCLIP14.43□□□□□ -0.1
SNF8-214ENST00000515174 SYNMO15061 1565 aa14.43□□□□□ -0.1
SNF8-214ENST00000515174 KIF1BO60333 1816 aa14.42□□□□□ -0.1
SNF8-214ENST00000515174 MYO5BQ9ULV0 1848 aa14.42□□□□□ -0.1
SNF8-214ENST00000515174 UGGT1Q9NYU2 1555 aa14.42□□□□□ -0.1
SNF8-214ENST00000515174 UBAP1LF5GYI3 381 aa14.41□□□□□ -0.1
SNF8-214ENST00000515174 PIK3C2BO00750 1634 aa14.41□□□□□ -0.1
SNF8-214ENST00000515174 SPATA31E1Q6ZUB1 1445 aa14.41□□□□□ -0.1
SNF8-214ENST00000515174 GGT6Q6P531 493 aa14.4□□□□□ -0.1
SNF8-214ENST00000515174 MIER1Q8N108 512 aa14.4□□□□□ -0.1
SNF8-214ENST00000515174 NPATQ14207 1427 aa14.4□□□□□ -0.1
SNF8-214ENST00000515174 NEURL4Q96JN8 1562 aa14.39□□□□□ -0.11
SNF8-214ENST00000515174 IFT172Q9UG01 1749 aa14.38□□□□□ -0.11
SNF8-214ENST00000515174 HSPA5P11021 654 aaKnown RBP14.38□□□□□ -0.11
SNF8-214ENST00000515174 CNTLNQ9NXG0 1405 aa14.38□□□□□ -0.11
SNF8-214ENST00000515174 IQSEC2Q5JU85 1478 aa14.38□□□□□ -0.11
SNF8-214ENST00000515174 LTBP4Q8N2S1 1624 aa14.37□□□□□ -0.11
SNF8-214ENST00000515174 NCKAP5LQ9HCH0 1330 aa14.37□□□□□ -0.11
SNF8-214ENST00000515174 ERVK-7P63135 1459 aa14.36□□□□□ -0.11
SNF8-214ENST00000515174 RALGAPBQ86X10 1494 aa14.36□□□□□ -0.11
SNF8-214ENST00000515174 ZNF335Q9H4Z2 1342 aaPredicted RBP14.35□□□□□ -0.11
SNF8-214ENST00000515174 ARHGAP31Q2M1Z3 1444 aa14.34□□□□□ -0.11
SNF8-214ENST00000515174 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms