RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, humanhuman

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-208ENST00000509620 EMP3P54852 163 aa9.64□□□□□ -0.87
OTUD4-208ENST00000509620 PPP4R3BQ5MIZ7 849 aa9.63□□□□□ -0.87
OTUD4-208ENST00000509620 FBXW7Q969H0 707 aa9.63□□□□□ -0.87
OTUD4-208ENST00000509620 ERBB3P21860 1342 aa9.62□□□□□ -0.87
OTUD4-208ENST00000509620 POTEB3A0JP26 581 aa9.62□□□□□ -0.87
OTUD4-208ENST00000509620 VARS2Q5ST30 1063 aaKnown RBP9.62□□□□□ -0.87
OTUD4-208ENST00000509620 POTEBQ6S5H4 581 aa9.62□□□□□ -0.87
OTUD4-208ENST00000509620 FAM205CA6NFA0 338 aa9.61□□□□□ -0.87
OTUD4-208ENST00000509620 C6orf132Q5T0Z8 1188 aa9.61□□□□□ -0.87
OTUD4-208ENST00000509620 NPDC1Q9NQX5 325 aaPredicted RBP9.61□□□□□ -0.87
OTUD4-208ENST00000509620 ZMYND10O75800 440 aa9.6□□□□□ -0.87
OTUD4-208ENST00000509620 PSDA5PKW4 1024 aaPredicted RBP9.59□□□□□ -0.87
OTUD4-208ENST00000509620 FECHP22830 423 aa9.59□□□□□ -0.87
OTUD4-208ENST00000509620 PTGDRQ13258 359 aa9.59□□□□□ -0.87
OTUD4-208ENST00000509620 FCHSD2O94868 740 aa9.58□□□□□ -0.88
OTUD4-208ENST00000509620 COL9A1P20849 921 aa9.58□□□□□ -0.88
OTUD4-208ENST00000509620 POTEEQ6S8J3 1075 aa9.58□□□□□ -0.88
OTUD4-208ENST00000509620 BCL2L12Q9HB09 334 aa9.58□□□□□ -0.88
OTUD4-208ENST00000509620 BARGINQ6ZT62 677 aa9.57□□□□□ -0.88
OTUD4-208ENST00000509620 HS3ST6Q96QI5 342 aa9.56□□□□□ -0.88
OTUD4-208ENST00000509620 SLC24A3Q9HC58 644 aa9.56□□□□□ -0.88
OTUD4-208ENST00000509620 GNPATO15228 680 aa9.54□□□□□ -0.88
OTUD4-208ENST00000509620 PSEN2P49810 448 aa9.54□□□□□ -0.88
OTUD4-208ENST00000509620 KCNK17Q96T54 332 aa9.54□□□□□ -0.88
OTUD4-208ENST00000509620 AXIN2Q9Y2T1 843 aa9.54□□□□□ -0.88
OTUD4-208ENST00000509620 PTPREP23469 700 aa9.53□□□□□ -0.88
OTUD4-208ENST00000509620 HIC1Q14526 733 aa9.53□□□□□ -0.88
OTUD4-208ENST00000509620 PPP1R3GB7ZBB8 358 aa9.51□□□□□ -0.89
OTUD4-208ENST00000509620 PADI6Q6TGC4 694 aa9.51□□□□□ -0.89
OTUD4-208ENST00000509620 ZNF687Q8N1G0 1237 aa9.51□□□□□ -0.89
OTUD4-208ENST00000509620 KRI1Q8N9T8 703 aaKnown RBP9.51□□□□□ -0.89
OTUD4-208ENST00000509620 FAM198AQ9UFP1 575 aa9.51□□□□□ -0.89
OTUD4-208ENST00000509620 DMRTA1Q5VZB9 504 aa9.5□□□□□ -0.89
OTUD4-208ENST00000509620 FAM161AQ3B820 660 aa9.49□□□□□ -0.89
OTUD4-208ENST00000509620 ARHGAP33O14559 1287 aa9.48□□□□□ -0.89
OTUD4-208ENST00000509620 PRSS12P56730 875 aa9.48□□□□□ -0.89
OTUD4-208ENST00000509620 PROX2Q3B8N5 592 aa9.48□□□□□ -0.89
OTUD4-208ENST00000509620 CDCA7LQ96GN5 454 aa9.48□□□□□ -0.89
OTUD4-208ENST00000509620 C3orf80F5H4A9 247 aa9.47□□□□□ -0.89
OTUD4-208ENST00000509620 MAP2K5Q13163 448 aa9.47□□□□□ -0.89
OTUD4-208ENST00000509620 TTC13Q8NBP0 860 aa9.47□□□□□ -0.89
OTUD4-208ENST00000509620 CERKQ8TCT0 537 aa9.47□□□□□ -0.89
OTUD4-208ENST00000509620 CCDC102AQ96A19 550 aa9.47□□□□□ -0.89
OTUD4-208ENST00000509620 TSKSQ9UJT2 592 aa9.47□□□□□ -0.89
OTUD4-208ENST00000509620 IRF6O14896 467 aa9.46□□□□□ -0.9
OTUD4-208ENST00000509620 ZBED2Q9BTP6 218 aa9.46□□□□□ -0.9
OTUD4-208ENST00000509620 MINK1Q8N4C8 1332 aaPredicted RBP9.46□□□□□ -0.9
OTUD4-208ENST00000509620 PBX2P40425 430 aa9.44□□□□□ -0.9
OTUD4-208ENST00000509620 AK7Q96M32 723 aa9.44□□□□□ -0.9
OTUD4-208ENST00000509620 TRIM6-TRIM34B2RNG4 842 aa9.43□□□□□ -0.9
OTUD4-208ENST00000509620 RBM27Q9P2N5 1060 aaKnown RBP9.43□□□□□ -0.9
OTUD4-208ENST00000509620 ADGRG1Q9Y653 693 aa9.43□□□□□ -0.9
OTUD4-208ENST00000509620 TRIM66O15016 1216 aa9.42□□□□□ -0.9
OTUD4-208ENST00000509620 KCNH8Q96L42 1107 aa9.42□□□□□ -0.9
OTUD4-208ENST00000509620 SMAPO00193 183 aa9.4□□□□□ -0.9
OTUD4-208ENST00000509620 NLRP7Q8WX94 980 aa9.4□□□□□ -0.9
OTUD4-208ENST00000509620 PHOX2BQ99453 314 aa9.4□□□□□ -0.9
OTUD4-208ENST00000509620 LSM11P83369 360 aaKnown RBP eCLIP9.39□□□□□ -0.91
OTUD4-208ENST00000509620 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
OTUD4-208ENST00000509620 KRTAP3-2Q9BYR7 98 aa9.39□□□□□ -0.91
OTUD4-208ENST00000509620 KIAA1468Q9P260 1216 aa9.39□□□□□ -0.91
OTUD4-208ENST00000509620 VPS9D1Q9Y2B5 631 aa9.39□□□□□ -0.91
OTUD4-208ENST00000509620 NUDT18Q6ZVK8 323 aa9.38□□□□□ -0.91
OTUD4-208ENST00000509620 SLC4A5Q9BY07 1137 aa9.38□□□□□ -0.91
OTUD4-208ENST00000509620 PNMA3Q9UL41 463 aa9.38□□□□□ -0.91
OTUD4-208ENST00000509620 BRPF1P55201 1214 aaPredicted RBP9.37□□□□□ -0.91
OTUD4-208ENST00000509620 METTL3Q86U44 580 aaKnown RBP9.37□□□□□ -0.91
OTUD4-208ENST00000509620 PXYLP1Q8TE99 480 aa9.37□□□□□ -0.91
OTUD4-208ENST00000509620 TATDN2Q93075 761 aa9.37□□□□□ -0.91
OTUD4-208ENST00000509620 PDE4DQ08499 809 aa9.36□□□□□ -0.91
OTUD4-208ENST00000509620 PACS2Q86VP3 889 aa9.36□□□□□ -0.91
OTUD4-208ENST00000509620 EYA1Q99502 592 aa9.36□□□□□ -0.91
OTUD4-208ENST00000509620 GPBP1L1Q9HC44 474 aaPredicted RBP9.36□□□□□ -0.91
OTUD4-208ENST00000509620 NBPF26B4DH59 902 aa9.35□□□□□ -0.91
OTUD4-208ENST00000509620 ONECUT3O60422 494 aaPredicted RBP9.35□□□□□ -0.91
OTUD4-208ENST00000509620 ANKRD13DQ6ZTN6 518 aa9.35□□□□□ -0.91
OTUD4-208ENST00000509620 SEPT9Q9UHD8 586 aaPredicted RBP9.35□□□□□ -0.91
OTUD4-208ENST00000509620 OATP04181 439 aa9.34□□□□□ -0.91
OTUD4-208ENST00000509620 NEUROD2Q15784 382 aa9.34□□□□□ -0.91
OTUD4-208ENST00000509620 ADGRD1Q6QNK2 874 aa9.34□□□□□ -0.91
OTUD4-208ENST00000509620 REPIN1Q9BWE0 567 aaKnown RBP9.34□□□□□ -0.91
OTUD4-208ENST00000509620 RABGEF1Q9UJ41 708 aa9.34□□□□□ -0.91
OTUD4-208ENST00000509620 TK2O00142 265 aa9.33□□□□□ -0.92
OTUD4-208ENST00000509620 AMHR2Q16671 573 aa9.33□□□□□ -0.92
OTUD4-208ENST00000509620 RBM46Q8TBY0 533 aaKnown RBP9.33□□□□□ -0.92
OTUD4-208ENST00000509620 RCCD1A6NED2 376 aa9.32□□□□□ -0.92
OTUD4-208ENST00000509620 MDM2Q00987 491 aaPredicted RBP9.32□□□□□ -0.92
OTUD4-208ENST00000509620 PARP9Q8IXQ6 854 aa9.32□□□□□ -0.92
OTUD4-208ENST00000509620 BHMG1C9JSJ3 638 aaPredicted RBP9.31□□□□□ -0.92
OTUD4-208ENST00000509620 HRO43593 1189 aa9.31□□□□□ -0.92
OTUD4-208ENST00000509620 TTLL12Q14166 644 aaPredicted RBP9.29□□□□□ -0.92
OTUD4-208ENST00000509620 TMUB1Q9BVT8 246 aa9.29□□□□□ -0.92
OTUD4-208ENST00000509620 KDM4CQ9H3R0 1056 aa9.28□□□□□ -0.92
OTUD4-208ENST00000509620 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.27□□□□□ -0.93
OTUD4-208ENST00000509620 DNAJB2P25686 324 aa9.27□□□□□ -0.93
OTUD4-208ENST00000509620 GIGYF2Q6Y7W6 1299 aaKnown RBP9.27□□□□□ -0.93
OTUD4-208ENST00000509620 TMEM134Q9H6X4 195 aa9.26□□□□□ -0.93
OTUD4-208ENST00000509620 MS4A1P11836 297 aa9.25□□□□□ -0.93
OTUD4-208ENST00000509620 FAM98CQ17RN3 349 aaKnown RBP9.25□□□□□ -0.93
OTUD4-208ENST00000509620 SWT1Q5T5J6 900 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms