RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 MYBBP1AQ9BQG0 1328 aaKnown RBP12.55□□□□□ -0.4
PHF3-208ENST00000506783 U2SURPO15042 1029 aaKnown RBP12.55□□□□□ -0.4
PHF3-208ENST00000506783 BCAR3O75815 825 aa12.55□□□□□ -0.4
PHF3-208ENST00000506783 TCERG1O14776 1098 aaKnown RBP12.54□□□□□ -0.4
PHF3-208ENST00000506783 TPRNQ4KMQ1 711 aa12.54□□□□□ -0.4
PHF3-208ENST00000506783 SPAG9O60271 1321 aaKnown RBP12.54□□□□□ -0.4
PHF3-208ENST00000506783 PTPN23Q9H3S7 1636 aa12.54□□□□□ -0.4
PHF3-208ENST00000506783 IQGAP2Q13576 1575 aa12.54□□□□□ -0.4
PHF3-208ENST00000506783 TMEM132EQ6IEE7 984 aa12.54□□□□□ -0.4
PHF3-208ENST00000506783 GZF1Q9H116 711 aaPredicted RBP12.54□□□□□ -0.4
PHF3-208ENST00000506783 COG6Q9Y2V7 657 aa12.54□□□□□ -0.4
PHF3-208ENST00000506783 KDM6BO15054 1643 aa12.54□□□□□ -0.4
PHF3-208ENST00000506783 MAGI1Q96QZ7 1491 aaPredicted RBP12.54□□□□□ -0.4
PHF3-208ENST00000506783 ANKRD50Q9ULJ7 1429 aa12.53□□□□□ -0.4
PHF3-208ENST00000506783 EPRSP07814 1512 aaKnown RBP12.53□□□□□ -0.4
PHF3-208ENST00000506783 RAPGEF3O95398 923 aa12.53□□□□□ -0.4
PHF3-208ENST00000506783 ABCC5O15440 1437 aa12.53□□□□□ -0.4
PHF3-208ENST00000506783 ANO8Q9HCE9 1232 aaPredicted RBP12.52□□□□□ -0.4
PHF3-208ENST00000506783 THOC2Q8NI27 1593 aaKnown RBP12.52□□□□□ -0.4
PHF3-208ENST00000506783 PANK1Q8TE04 598 aa12.51□□□□□ -0.41
PHF3-208ENST00000506783 DAPK1P53355 1430 aa12.51□□□□□ -0.41
PHF3-208ENST00000506783 KIF15Q9NS87 1388 aa12.51□□□□□ -0.41
PHF3-208ENST00000506783 EIF4G3O43432 1585 aaKnown RBP12.5□□□□□ -0.41
PHF3-208ENST00000506783 WDR62O43379 1518 aa12.5□□□□□ -0.41
PHF3-208ENST00000506783 MAGI3Q5TCQ9 1506 aa12.5□□□□□ -0.41
PHF3-208ENST00000506783 ELL2O00472 640 aaPredicted RBP12.5□□□□□ -0.41
PHF3-208ENST00000506783 RALBP1Q15311 655 aa12.5□□□□□ -0.41
PHF3-208ENST00000506783 CFAP70Q5T0N1 1121 aa12.5□□□□□ -0.41
PHF3-208ENST00000506783 BRPF3Q9ULD4 1205 aa12.49□□□□□ -0.41
PHF3-208ENST00000506783 NCOA1Q15788 1441 aa12.49□□□□□ -0.41
PHF3-208ENST00000506783 NUTM2FA1L443 756 aa12.48□□□□□ -0.41
PHF3-208ENST00000506783 FOXD4L1Q9NU39 408 aa12.48□□□□□ -0.41
PHF3-208ENST00000506783 CUL7Q14999 1698 aa12.47□□□□□ -0.41
PHF3-208ENST00000506783 APBB1O00213 710 aa12.47□□□□□ -0.41
PHF3-208ENST00000506783 CCDC144AA2RUR9 1427 aa12.46□□□□□ -0.41
PHF3-208ENST00000506783 GOLGA2Q08379 1002 aa12.46□□□□□ -0.41
PHF3-208ENST00000506783 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.46□□□□□ -0.42
PHF3-208ENST00000506783 TARBP1Q13395 1621 aaKnown RBP12.45□□□□□ -0.42
PHF3-208ENST00000506783 U2AF1L5P0DN76 240 aaPredicted RBP12.45□□□□□ -0.42
PHF3-208ENST00000506783 U2AF1Q01081 240 aaKnown RBP eCLIP12.45□□□□□ -0.42
PHF3-208ENST00000506783 MORC1Q86VD1 984 aa12.45□□□□□ -0.42
PHF3-208ENST00000506783 ARHGEF11O15085 1522 aa12.45□□□□□ -0.42
PHF3-208ENST00000506783 FBLN1P23142 703 aa12.45□□□□□ -0.42
PHF3-208ENST00000506783 TNNQ9UQP3 1299 aa12.44□□□□□ -0.42
PHF3-208ENST00000506783 ERICH6BQ5W0A0 696 aa12.43□□□□□ -0.42
PHF3-208ENST00000506783 SLC12A5Q9H2X9 1139 aa12.43□□□□□ -0.42
PHF3-208ENST00000506783 SPINK5Q9NQ38 1064 aaPredicted RBP12.43□□□□□ -0.42
PHF3-208ENST00000506783 EFCAB5A4FU69 1503 aa12.43□□□□□ -0.42
PHF3-208ENST00000506783 WASHC2CQ9Y4E1 1318 aa12.43□□□□□ -0.42
PHF3-208ENST00000506783 ZBTB7CA1YPR0 619 aa12.42□□□□□ -0.42
PHF3-208ENST00000506783 FRAT2O75474 233 aaPredicted RBP12.42□□□□□ -0.42
PHF3-208ENST00000506783 SUPT6HQ7KZ85 1726 aaKnown RBP12.42□□□□□ -0.42
PHF3-208ENST00000506783 PPP2R1AP30153 589 aa12.41□□□□□ -0.42
PHF3-208ENST00000506783 SRPK2P78362 688 aaKnown RBP12.41□□□□□ -0.42
PHF3-208ENST00000506783 TROQ12816 1431 aaPredicted RBP12.41□□□□□ -0.42
PHF3-208ENST00000506783 KIAA1107Q9UPP5 1409 aa12.41□□□□□ -0.42
PHF3-208ENST00000506783 FTSJ3Q8IY81 847 aaKnown RBP12.41□□□□□ -0.42
PHF3-208ENST00000506783 DMRT2Q9Y5R5 561 aa12.41□□□□□ -0.42
PHF3-208ENST00000506783 DISP3Q9P2K9 1392 aa12.41□□□□□ -0.42
PHF3-208ENST00000506783 BACH2Q9BYV9 841 aa12.4□□□□□ -0.42
PHF3-208ENST00000506783 HSP90AA1P07900 732 aaKnown RBP12.4□□□□□ -0.42
PHF3-208ENST00000506783 RPRD2Q5VT52 1461 aaKnown RBP12.4□□□□□ -0.42
PHF3-208ENST00000506783 ADAMTS12P58397 1594 aa12.4□□□□□ -0.42
PHF3-208ENST00000506783 DHX29Q7Z478 1369 aaKnown RBP12.4□□□□□ -0.42
PHF3-208ENST00000506783 EHBP1L1Q8N3D4 1523 aa12.39□□□□□ -0.43
PHF3-208ENST00000506783 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.39□□□□□ -0.431e-6■■□□□ 11.8
PHF3-208ENST00000506783 ABCA5Q8WWZ7 1642 aa12.39□□□□□ -0.43
PHF3-208ENST00000506783 DENND4BO75064 1496 aaPredicted RBP12.39□□□□□ -0.43
PHF3-208ENST00000506783 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.38□□□□□ -0.43
PHF3-208ENST00000506783 MFAP1P55081 439 aaKnown RBP12.38□□□□□ -0.43
PHF3-208ENST00000506783 TSR2Q969E8 191 aaKnown RBP12.38□□□□□ -0.43
PHF3-208ENST00000506783 NFKBIBQ15653 356 aa12.38□□□□□ -0.43
PHF3-208ENST00000506783 C9orf84Q5VXU9 1444 aa12.38□□□□□ -0.43
PHF3-208ENST00000506783 MAP3K1Q13233 1512 aa12.38□□□□□ -0.43
PHF3-208ENST00000506783 SMG6Q86US8 1419 aaKnown RBP12.38□□□□□ -0.43
PHF3-208ENST00000506783 SCAPERQ9BY12 1400 aa12.38□□□□□ -0.43
PHF3-208ENST00000506783 ATP10BO94823 1461 aa12.37□□□□□ -0.43
PHF3-208ENST00000506783 RSPH4AQ5TD94 716 aa12.37□□□□□ -0.43
PHF3-208ENST00000506783 ARHGAP5Q13017 1502 aa12.36□□□□□ -0.43
PHF3-208ENST00000506783 GGNBP2Q9H3C7 697 aa12.36□□□□□ -0.43
PHF3-208ENST00000506783 CABP2Q9NPB3 220 aa12.36□□□□□ -0.43
PHF3-208ENST00000506783 NUP153P49790 1475 aaKnown RBP12.35□□□□□ -0.43
PHF3-208ENST00000506783 DISP1Q96F81 1524 aa12.35□□□□□ -0.43
PHF3-208ENST00000506783 CAMSAP2Q08AD1 1489 aa12.35□□□□□ -0.43
PHF3-208ENST00000506783 ITPRIPQ8IWB1 547 aa12.35□□□□□ -0.43
PHF3-208ENST00000506783 ZNF428Q96B54 188 aa12.35□□□□□ -0.43
PHF3-208ENST00000506783 UPF2Q9HAU5 1272 aaKnown RBP12.35□□□□□ -0.43
PHF3-208ENST00000506783 UGGT2Q9NYU1 1516 aa12.35□□□□□ -0.43
PHF3-208ENST00000506783 IGHDP01880 384 aa12.34□□□□□ -0.43
PHF3-208ENST00000506783 MTHFSP49914 203 aa12.33□□□□□ -0.44
PHF3-208ENST00000506783 POGKQ9P215 609 aa12.33□□□□□ -0.44
PHF3-208ENST00000506783 PBRM1Q86U86 1689 aa12.33□□□□□ -0.44
PHF3-208ENST00000506783 MINK1Q8N4C8 1332 aaPredicted RBP12.33□□□□□ -0.44
PHF3-208ENST00000506783 MIA2Q96PC5 1412 aa12.33□□□□□ -0.44
PHF3-208ENST00000506783 SEC24BO95487 1268 aa12.33□□□□□ -0.44
PHF3-208ENST00000506783 DDRGK1Q96HY6 314 aa12.33□□□□□ -0.44
PHF3-208ENST00000506783 NUP160Q12769 1436 aa12.32□□□□□ -0.44
PHF3-208ENST00000506783 PER1O15534 1290 aaPredicted RBP12.32□□□□□ -0.44
PHF3-208ENST00000506783 CEP170Q5SW79 1584 aa12.32□□□□□ -0.44
PHF3-208ENST00000506783 CENPJQ9HC77 1338 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms