RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 BCL2L12Q9HB09 334 aa12.9□□□□□ -0.34
NIPBL-205ENST00000505998 CDHR5Q9HBB8 845 aa12.9□□□□□ -0.34
NIPBL-205ENST00000505998 GPR37O15354 613 aa12.88□□□□□ -0.35
NIPBL-205ENST00000505998 ZMYND10O75800 440 aa12.87□□□□□ -0.35
NIPBL-205ENST00000505998 PTPREP23469 700 aa12.87□□□□□ -0.35
NIPBL-205ENST00000505998 PTGDRQ13258 359 aa12.87□□□□□ -0.35
NIPBL-205ENST00000505998 HIC1Q14526 733 aa12.86□□□□□ -0.35
NIPBL-205ENST00000505998 CERKQ8TCT0 537 aa12.85□□□□□ -0.35
NIPBL-205ENST00000505998 KCNH8Q96L42 1107 aa12.85□□□□□ -0.35
NIPBL-205ENST00000505998 GNPATO15228 680 aa12.84□□□□□ -0.35
NIPBL-205ENST00000505998 BARGINQ6ZT62 677 aa12.84□□□□□ -0.35
NIPBL-205ENST00000505998 HS3ST6Q96QI5 342 aa12.84□□□□□ -0.35
NIPBL-205ENST00000505998 NPDC1Q9NQX5 325 aaPredicted RBP12.84□□□□□ -0.35
NIPBL-205ENST00000505998 KCNK17Q96T54 332 aa12.83□□□□□ -0.36
NIPBL-205ENST00000505998 KRI1Q8N9T8 703 aaKnown RBP12.82□□□□□ -0.36
NIPBL-205ENST00000505998 ZNF687Q8N1G0 1237 aa12.81□□□□□ -0.36
NIPBL-205ENST00000505998 PPP1R3GB7ZBB8 358 aa12.8□□□□□ -0.36
NIPBL-205ENST00000505998 COL9A1P20849 921 aa12.79□□□□□ -0.36
NIPBL-205ENST00000505998 POTEB3A0JP26 581 aa12.78□□□□□ -0.36
NIPBL-205ENST00000505998 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
NIPBL-205ENST00000505998 POTEBQ6S5H4 581 aa12.78□□□□□ -0.36
NIPBL-205ENST00000505998 SLC24A3Q9HC58 644 aa12.78□□□□□ -0.36
NIPBL-205ENST00000505998 PBX2P40425 430 aa12.77□□□□□ -0.37
NIPBL-205ENST00000505998 FECHP22830 423 aa12.76□□□□□ -0.37
NIPBL-205ENST00000505998 PSEN2P49810 448 aa12.76□□□□□ -0.37
NIPBL-205ENST00000505998 PRSS12P56730 875 aa12.76□□□□□ -0.37
NIPBL-205ENST00000505998 MAP2K5Q13163 448 aa12.75□□□□□ -0.37
NIPBL-205ENST00000505998 POTEEQ6S8J3 1075 aa12.75□□□□□ -0.37
NIPBL-205ENST00000505998 PADI6Q6TGC4 694 aa12.75□□□□□ -0.37
NIPBL-205ENST00000505998 MINK1Q8N4C8 1332 aaPredicted RBP12.75□□□□□ -0.37
NIPBL-205ENST00000505998 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
NIPBL-205ENST00000505998 CDCA7LQ96GN5 454 aa12.74□□□□□ -0.37
NIPBL-205ENST00000505998 RBM27Q9P2N5 1060 aaKnown RBP12.74□□□□□ -0.37
NIPBL-205ENST00000505998 AK7Q96M32 723 aa12.71□□□□□ -0.37
NIPBL-205ENST00000505998 IRF6O14896 467 aa12.7□□□□□ -0.38
NIPBL-205ENST00000505998 DMRTA1Q5VZB9 504 aa12.7□□□□□ -0.38
NIPBL-205ENST00000505998 TTC13Q8NBP0 860 aa12.69□□□□□ -0.38
NIPBL-205ENST00000505998 CCDC102AQ96A19 550 aa12.69□□□□□ -0.38
NIPBL-205ENST00000505998 ZBED2Q9BTP6 218 aa12.69□□□□□ -0.38
NIPBL-205ENST00000505998 TRIM6-TRIM34B2RNG4 842 aa12.68□□□□□ -0.38
NIPBL-205ENST00000505998 PROX2Q3B8N5 592 aa12.68□□□□□ -0.38
NIPBL-205ENST00000505998 PACS2Q86VP3 889 aa12.67□□□□□ -0.38
NIPBL-205ENST00000505998 TSKSQ9UJT2 592 aa12.67□□□□□ -0.38
NIPBL-205ENST00000505998 ONECUT3O60422 494 aaPredicted RBP12.66□□□□□ -0.38
NIPBL-205ENST00000505998 SLC4A5Q9BY07 1137 aa12.66□□□□□ -0.38
NIPBL-205ENST00000505998 FAM198AQ9UFP1 575 aa12.66□□□□□ -0.38
NIPBL-205ENST00000505998 POTEGQ6S5H5 508 aa12.65□□□□□ -0.38
NIPBL-205ENST00000505998 ADGRG1Q9Y653 693 aa12.64□□□□□ -0.39
NIPBL-205ENST00000505998 POTEMA6NI47 508 aa12.63□□□□□ -0.39
NIPBL-205ENST00000505998 NBPF26B4DH59 902 aa12.63□□□□□ -0.39
NIPBL-205ENST00000505998 OATP04181 439 aa12.63□□□□□ -0.39
NIPBL-205ENST00000505998 LSM11P83369 360 aaKnown RBP eCLIP12.63□□□□□ -0.39
NIPBL-205ENST00000505998 FAM161AQ3B820 660 aa12.63□□□□□ -0.39
NIPBL-205ENST00000505998 TRIM66O15016 1216 aa12.62□□□□□ -0.39
NIPBL-205ENST00000505998 KIAA1468Q9P260 1216 aa12.62□□□□□ -0.39
NIPBL-205ENST00000505998 VPS9D1Q9Y2B5 631 aa12.62□□□□□ -0.39
NIPBL-205ENST00000505998 RBM46Q8TBY0 533 aaKnown RBP12.61□□□□□ -0.39
NIPBL-205ENST00000505998 RABGEF1Q9UJ41 708 aa12.61□□□□□ -0.39
NIPBL-205ENST00000505998 PNMA3Q9UL41 463 aa12.61□□□□□ -0.39
NIPBL-205ENST00000505998 TK2O00142 265 aa12.6□□□□□ -0.39
NIPBL-205ENST00000505998 NUDT18Q6ZVK8 323 aa12.6□□□□□ -0.39
NIPBL-205ENST00000505998 TATDN2Q93075 761 aa12.6□□□□□ -0.39
NIPBL-205ENST00000505998 METTL3Q86U44 580 aaKnown RBP12.59□□□□□ -0.39
NIPBL-205ENST00000505998 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
NIPBL-205ENST00000505998 PXYLP1Q8TE99 480 aa12.57□□□□□ -0.4
NIPBL-205ENST00000505998 SMAPO00193 183 aa12.56□□□□□ -0.4
NIPBL-205ENST00000505998 PDE4DQ08499 809 aa12.56□□□□□ -0.4
NIPBL-205ENST00000505998 ADGRD1Q6QNK2 874 aa12.56□□□□□ -0.4
NIPBL-205ENST00000505998 CDAN1Q8IWY9 1227 aa12.56□□□□□ -0.4
NIPBL-205ENST00000505998 C3orf80F5H4A9 247 aa12.55□□□□□ -0.4
NIPBL-205ENST00000505998 EYA1Q99502 592 aa12.55□□□□□ -0.4
NIPBL-205ENST00000505998 NBPF3Q9H094 633 aa12.55□□□□□ -0.4
NIPBL-205ENST00000505998 AMHR2Q16671 573 aa12.54□□□□□ -0.4
NIPBL-205ENST00000505998 PHOX2BQ99453 314 aa12.54□□□□□ -0.4
NIPBL-205ENST00000505998 KRTAP3-3Q9BYR6 98 aa12.54□□□□□ -0.4
NIPBL-205ENST00000505998 KRTAP3-2Q9BYR7 98 aa12.54□□□□□ -0.4
NIPBL-205ENST00000505998 NEUROD2Q15784 382 aa12.53□□□□□ -0.4
NIPBL-205ENST00000505998 TTLL12Q14166 644 aaPredicted RBP12.52□□□□□ -0.41
NIPBL-205ENST00000505998 SEPT9Q9UHD8 586 aaPredicted RBP12.52□□□□□ -0.41
NIPBL-205ENST00000505998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.51□□□□□ -0.41
NIPBL-205ENST00000505998 RCCD1A6NED2 376 aa12.51□□□□□ -0.41
NIPBL-205ENST00000505998 BRPF1P55201 1214 aaPredicted RBP12.51□□□□□ -0.41
NIPBL-205ENST00000505998 STAC3Q96MF2 364 aa12.51□□□□□ -0.41
NIPBL-205ENST00000505998 BHMG1C9JSJ3 638 aaPredicted RBP12.5□□□□□ -0.41
NIPBL-205ENST00000505998 MDM2Q00987 491 aaPredicted RBP12.5□□□□□ -0.41
NIPBL-205ENST00000505998 DNAJB2P25686 324 aa12.49□□□□□ -0.41
NIPBL-205ENST00000505998 MRPL50Q8N5N7 158 aaKnown RBP12.49□□□□□ -0.41
NIPBL-205ENST00000505998 NLRP7Q8WX94 980 aa12.49□□□□□ -0.41
NIPBL-205ENST00000505998 HRO43593 1189 aa12.48□□□□□ -0.41
NIPBL-205ENST00000505998 CLCN1P35523 988 aa12.48□□□□□ -0.41
NIPBL-205ENST00000505998 FAM98CQ17RN3 349 aaKnown RBP12.48□□□□□ -0.41
NIPBL-205ENST00000505998 LAPTM4BQ86VI4 370 aa12.48□□□□□ -0.41
NIPBL-205ENST00000505998 PARP9Q8IXQ6 854 aa12.48□□□□□ -0.41
NIPBL-205ENST00000505998 GPCPD1Q9NPB8 672 aa12.47□□□□□ -0.41
NIPBL-205ENST00000505998 GPBP1L1Q9HC44 474 aaPredicted RBP12.46□□□□□ -0.41
NIPBL-205ENST00000505998 HDGFP51858 240 aaKnown RBP12.44□□□□□ -0.42
NIPBL-205ENST00000505998 KDM4CQ9H3R0 1056 aa12.44□□□□□ -0.42
NIPBL-205ENST00000505998 TMEM134Q9H6X4 195 aa12.44□□□□□ -0.42
NIPBL-205ENST00000505998 GOLGA8CPA6NN73 597 aa12.43□□□□□ -0.42
NIPBL-205ENST00000505998 GIGYF2Q6Y7W6 1299 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms