RNA–Protein interactions for RNA: ENST00000505712.5

LINC01339-201, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 2 BASIC

Gene LINC01339, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-201ENST00000505712 BHMG1C9JSJ3 638 aaPredicted RBP11.15□□□□□ -0.62
LINC01339-201ENST00000505712 E2F4Q16254 413 aa11.14□□□□□ -0.63
LINC01339-201ENST00000505712 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
LINC01339-201ENST00000505712 SPDYE16A6NNV3 312 aaPredicted RBP11.13□□□□□ -0.63
LINC01339-201ENST00000505712 PDIA6Q15084 440 aa11.13□□□□□ -0.63
LINC01339-201ENST00000505712 MRPL50Q8N5N7 158 aaKnown RBP11.13□□□□□ -0.63
LINC01339-201ENST00000505712 GOLGA8CPA6NN73 597 aa11.12□□□□□ -0.63
LINC01339-201ENST00000505712 COL9A1P20849 921 aa11.11□□□□□ -0.63
LINC01339-201ENST00000505712 DDX12PQ92771 950 aa11.11□□□□□ -0.63
LINC01339-201ENST00000505712 C6orf132Q5T0Z8 1188 aa11.09□□□□□ -0.63
LINC01339-201ENST00000505712 PLA2G2EQ9NZK7 142 aa11.09□□□□□ -0.63
LINC01339-201ENST00000505712 RABGEF1Q9UJ41 708 aa11.09□□□□□ -0.63
LINC01339-201ENST00000505712 ARIH1Q9Y4X5 557 aaPredicted RBP11.09□□□□□ -0.63
LINC01339-201ENST00000505712 PROX2Q3B8N5 592 aa11.08□□□□□ -0.64
LINC01339-201ENST00000505712 NBR1Q14596 966 aa11.07□□□□□ -0.64
LINC01339-201ENST00000505712 WNT2BQ93097 391 aa11.07□□□□□ -0.64
LINC01339-201ENST00000505712 RBM33Q96EV2 1170 aaKnown RBP11.07□□□□□ -0.64
LINC01339-201ENST00000505712 THSD4Q6ZMP0 1018 aa11.06□□□□□ -0.64
LINC01339-201ENST00000505712 PTPN5P54829 565 aa11.05□□□□□ -0.64
LINC01339-201ENST00000505712 EN1Q05925 392 aaPredicted RBP11.05□□□□□ -0.64
LINC01339-201ENST00000505712 ONECUT3O60422 494 aaPredicted RBP11.04□□□□□ -0.64
LINC01339-201ENST00000505712 MAP3K7O43318 606 aa11.03□□□□□ -0.64
LINC01339-201ENST00000505712 LAPTM4BQ86VI4 370 aa11.02□□□□□ -0.65
LINC01339-201ENST00000505712 KIAA1468Q9P260 1216 aa11.01□□□□□ -0.65
LINC01339-201ENST00000505712 TRIM6-TRIM34B2RNG4 842 aa11□□□□□ -0.65
LINC01339-201ENST00000505712 ANKK1Q8NFD2 765 aa11□□□□□ -0.65
LINC01339-201ENST00000505712 GRXCR2A6NFK2 248 aa10.98□□□□□ -0.65
LINC01339-201ENST00000505712 TSR1Q2NL82 804 aaKnown RBP10.98□□□□□ -0.65
LINC01339-201ENST00000505712 TSHZ2Q9NRE2 1034 aa10.98□□□□□ -0.65
LINC01339-201ENST00000505712 CERKQ8TCT0 537 aa10.95□□□□□ -0.66
LINC01339-201ENST00000505712 ZFRQ96KR1 1074 aaKnown RBP10.95□□□□□ -0.66
LINC01339-201ENST00000505712 PACS2Q86VP3 889 aa10.94□□□□□ -0.66
LINC01339-201ENST00000505712 SEPT9Q9UHD8 586 aaPredicted RBP10.94□□□□□ -0.66
LINC01339-201ENST00000505712 FAM98CQ17RN3 349 aaKnown RBP10.93□□□□□ -0.66
LINC01339-201ENST00000505712 SOWAHBA6NEL2 793 aa10.92□□□□□ -0.66
LINC01339-201ENST00000505712 OSBPP22059 807 aa10.91□□□□□ -0.66
LINC01339-201ENST00000505712 BCAMP50895 628 aa10.91□□□□□ -0.66
LINC01339-201ENST00000505712 TSKSQ9UJT2 592 aa10.91□□□□□ -0.66
LINC01339-201ENST00000505712 PRIM1P49642 420 aaKnown RBP10.9□□□□□ -0.66
LINC01339-201ENST00000505712 PRSS12P56730 875 aa10.9□□□□□ -0.66
LINC01339-201ENST00000505712 ARHGEF1Q92888 912 aaKnown RBP10.9□□□□□ -0.66
LINC01339-201ENST00000505712 CDCA7LQ96GN5 454 aa10.9□□□□□ -0.66
LINC01339-201ENST00000505712 IFFO2Q5TF58 517 aa10.89□□□□□ -0.67
LINC01339-201ENST00000505712 NYAP1Q6ZVC0 841 aa10.89□□□□□ -0.67
LINC01339-201ENST00000505712 KCNV2Q8TDN2 545 aa10.87□□□□□ -0.67
LINC01339-201ENST00000505712 LRCH3Q96II8 777 aa10.87□□□□□ -0.67
LINC01339-201ENST00000505712 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.86□□□□□ -0.67
LINC01339-201ENST00000505712 RBM27Q9P2N5 1060 aaKnown RBP10.86□□□□□ -0.67
LINC01339-201ENST00000505712 NBPF26B4DH59 902 aa10.85□□□□□ -0.67
LINC01339-201ENST00000505712 CDHR5Q9HBB8 845 aa10.85□□□□□ -0.67
LINC01339-201ENST00000505712 P3H3Q8IVL6 736 aa10.84□□□□□ -0.67
LINC01339-201ENST00000505712 WBP1LQ9NX94 342 aa10.83□□□□□ -0.68
LINC01339-201ENST00000505712 TSR3Q9UJK0 312 aaKnown RBP10.83□□□□□ -0.68
LINC01339-201ENST00000505712 FAM198AQ9UFP1 575 aa10.82□□□□□ -0.68
LINC01339-201ENST00000505712 HPS5Q9UPZ3 1129 aa10.82□□□□□ -0.68
LINC01339-201ENST00000505712 ITGBL1O95965 494 aaPredicted RBP10.81□□□□□ -0.68
LINC01339-201ENST00000505712 TATDN2Q93075 761 aa10.81□□□□□ -0.68
LINC01339-201ENST00000505712 PNMA3Q9UL41 463 aa10.81□□□□□ -0.68
LINC01339-201ENST00000505712 SMAPO00193 183 aa10.8□□□□□ -0.68
LINC01339-201ENST00000505712 A0A0G2JS52 829 aa10.79□□□□□ -0.68
LINC01339-201ENST00000505712 PLCB2Q00722 1185 aa10.79□□□□□ -0.68
LINC01339-201ENST00000505712 MLLT3P42568 568 aaPredicted RBP10.78□□□□□ -0.68
LINC01339-201ENST00000505712 RGS20O76081 388 aa10.77□□□□□ -0.69
LINC01339-201ENST00000505712 SAMD7Q7Z3H4 446 aa10.77□□□□□ -0.69
LINC01339-201ENST00000505712 NPDC1Q9NQX5 325 aaPredicted RBP10.77□□□□□ -0.69
LINC01339-201ENST00000505712 PPP4CP60510 307 aa10.76□□□□□ -0.69
LINC01339-201ENST00000505712 PADI6Q6TGC4 694 aa10.76□□□□□ -0.69
LINC01339-201ENST00000505712 NUDT18Q6ZVK8 323 aa10.76□□□□□ -0.69
LINC01339-201ENST00000505712 C3orf80F5H4A9 247 aa10.75□□□□□ -0.69
LINC01339-201ENST00000505712 HDGFP51858 240 aaKnown RBP10.75□□□□□ -0.69
LINC01339-201ENST00000505712 TTC13Q8NBP0 860 aa10.75□□□□□ -0.69
LINC01339-201ENST00000505712 KCNC4Q03721 635 aa10.73□□□□□ -0.69
LINC01339-201ENST00000505712 RNF40O75150 1001 aa10.7□□□□□ -0.7
LINC01339-201ENST00000505712 NECTIN2Q92692 538 aa10.7□□□□□ -0.7
LINC01339-201ENST00000505712 PTGDRQ13258 359 aa10.69□□□□□ -0.7
LINC01339-201ENST00000505712 NUTM2FA1L443 756 aa10.67□□□□□ -0.7
LINC01339-201ENST00000505712 SLC4A3P48751 1232 aa10.67□□□□□ -0.7
LINC01339-201ENST00000505712 SEMA3EO15041 775 aa10.66□□□□□ -0.7
LINC01339-201ENST00000505712 SLF2Q8IX21 1173 aa10.66□□□□□ -0.7
LINC01339-201ENST00000505712 SWT1Q5T5J6 900 aaKnown RBP10.65□□□□□ -0.7
LINC01339-201ENST00000505712 EYA1Q99502 592 aa10.65□□□□□ -0.7
LINC01339-201ENST00000505712 FCHSD2O94868 740 aa10.62□□□□□ -0.71
LINC01339-201ENST00000505712 HAP1P54257 671 aaPredicted RBP10.62□□□□□ -0.71
LINC01339-201ENST00000505712 TJAP1Q5JTD0 557 aa10.62□□□□□ -0.71
LINC01339-201ENST00000505712 RBM46Q8TBY0 533 aaKnown RBP10.62□□□□□ -0.71
LINC01339-201ENST00000505712 SMYD5Q6GMV2 418 aa10.61□□□□□ -0.71
LINC01339-201ENST00000505712 MTRQ99707 1265 aa10.61□□□□□ -0.71
LINC01339-201ENST00000505712 IL21Q9HBE4 155 aa10.61□□□□□ -0.71
LINC01339-201ENST00000505712 DNAJB2P25686 324 aa10.6□□□□□ -0.71
LINC01339-201ENST00000505712 APLP1P51693 650 aa10.6□□□□□ -0.71
LINC01339-201ENST00000505712 ADGRG1Q9Y653 693 aa10.6□□□□□ -0.71
LINC01339-201ENST00000505712 TESPA1A2RU30 521 aaPredicted RBP10.59□□□□□ -0.71
LINC01339-201ENST00000505712 PRR14Q9BWN1 585 aa10.58□□□□□ -0.72
LINC01339-201ENST00000505712 IRX2Q9BZI1 471 aaPredicted RBP10.57□□□□□ -0.72
LINC01339-201ENST00000505712 TMEM134Q9H6X4 195 aa10.56□□□□□ -0.72
LINC01339-201ENST00000505712 CCDC180Q9P1Z9 1646 aa10.55□□□□□ -0.72
LINC01339-201ENST00000505712 HIC1Q14526 733 aa10.55□□□□□ -0.72
LINC01339-201ENST00000505712 RCCD1A6NED2 376 aa10.53□□□□□ -0.72
LINC01339-201ENST00000505712 RBM26Q5T8P6 1007 aaKnown RBP10.53□□□□□ -0.72
LINC01339-201ENST00000505712 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms