RNA–Protein interactions for RNA: ENST00000504335.1

SMTN-221, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-221ENST00000504335 ZNF500O60304 480 aaPredicted RBP17.23■□□□□ 0.35
SMTN-221ENST00000504335 PNISRQ8TF01 805 aaKnown RBP17.21■□□□□ 0.35
SMTN-221ENST00000504335 RNF216Q9NWF9 866 aaPredicted RBP17.21■□□□□ 0.35
SMTN-221ENST00000504335 SASS6Q6UVJ0 657 aa17.2■□□□□ 0.34
SMTN-221ENST00000504335 USP19O94966 1318 aa17.2■□□□□ 0.34
SMTN-221ENST00000504335 DNAJC2Q99543 621 aaKnown RBP17.2■□□□□ 0.34
SMTN-221ENST00000504335 CRBNQ96SW2 442 aa17.19■□□□□ 0.34
SMTN-221ENST00000504335 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
SMTN-221ENST00000504335 CHMP5Q9NZZ3 219 aa17.17■□□□□ 0.34
SMTN-221ENST00000504335 CGNQ9P2M7 1197 aaKnown RBP17.17■□□□□ 0.34
SMTN-221ENST00000504335 VIRMAQ69YN4 1812 aaKnown RBP17.16■□□□□ 0.34
SMTN-221ENST00000504335 LRPPRCP42704 1394 aaKnown RBP17.15■□□□□ 0.34
SMTN-221ENST00000504335 SAMD1Q6SPF0 538 aaPredicted RBP17.15■□□□□ 0.34
SMTN-221ENST00000504335 NOL7Q9UMY1 257 aaKnown RBP17.15■□□□□ 0.34
SMTN-221ENST00000504335 UACAQ9BZF9 1416 aa17.14■□□□□ 0.33
SMTN-221ENST00000504335 PTMSP20962 102 aa17.13■□□□□ 0.33
SMTN-221ENST00000504335 MCM5P33992 734 aa17.13■□□□□ 0.33
SMTN-221ENST00000504335 CBX1P83916 185 aa17.13■□□□□ 0.33
SMTN-221ENST00000504335 SKOR2Q2VWA4 1001 aaPredicted RBP17.13■□□□□ 0.33
SMTN-221ENST00000504335 TMC1Q8TDI8 760 aa17.13■□□□□ 0.33
SMTN-221ENST00000504335 POLR1AO95602 1720 aaPredicted RBP17.12■□□□□ 0.33
SMTN-221ENST00000504335 MMP14P50281 582 aa17.12■□□□□ 0.33
SMTN-221ENST00000504335 IRX5P78411 483 aaPredicted RBP17.12■□□□□ 0.33
SMTN-221ENST00000504335 NASPP49321 788 aaPredicted RBP17.11■□□□□ 0.33
SMTN-221ENST00000504335 HOMEZQ8IX15 550 aa17.11■□□□□ 0.33
SMTN-221ENST00000504335 GAS2L3Q86XJ1 694 aa17.11■□□□□ 0.33
SMTN-221ENST00000504335 CLGNO14967 610 aa17.1■□□□□ 0.33
SMTN-221ENST00000504335 FAM50AQ14320 339 aaKnown RBP17.1■□□□□ 0.33
SMTN-221ENST00000504335 KIF7Q2M1P5 1343 aa17.1■□□□□ 0.33
SMTN-221ENST00000504335 DHX29Q7Z478 1369 aaKnown RBP17.1■□□□□ 0.33
SMTN-221ENST00000504335 ZBTB22O15209 634 aa17.09■□□□□ 0.33
SMTN-221ENST00000504335 TBC1D2Q9BYX2 928 aa17.09■□□□□ 0.33
SMTN-221ENST00000504335 UPF2Q9HAU5 1272 aaKnown RBP17.09■□□□□ 0.33
SMTN-221ENST00000504335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.08■□□□□ 0.32
SMTN-221ENST00000504335 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
SMTN-221ENST00000504335 PLIN1O60240 522 aa17.07■□□□□ 0.32
SMTN-221ENST00000504335 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
SMTN-221ENST00000504335 MYRIPQ8NFW9 859 aa17.06■□□□□ 0.32
SMTN-221ENST00000504335 NLRP1Q9C000 1473 aa17.05■□□□□ 0.32
SMTN-221ENST00000504335 SCAPERQ9BY12 1400 aa17.05■□□□□ 0.32
SMTN-221ENST00000504335 TIAM1Q13009 1591 aa17.05■□□□□ 0.32
SMTN-221ENST00000504335 CCDC66A2RUB6 948 aa17.04■□□□□ 0.32
SMTN-221ENST00000504335 E9PSI1 815 aa17.04■□□□□ 0.32
SMTN-221ENST00000504335 CCDC18Q5T9S5 1454 aa17.04■□□□□ 0.32
SMTN-221ENST00000504335 ZNF771Q7L3S4 317 aaPredicted RBP17.04■□□□□ 0.32
SMTN-221ENST00000504335 ZKSCAN5Q9Y2L8 839 aa17.04■□□□□ 0.32
SMTN-221ENST00000504335 KCNJ4P48050 445 aa17.03■□□□□ 0.32
SMTN-221ENST00000504335 AXDND1Q5T1B0 1012 aaPredicted RBP17.03■□□□□ 0.32
SMTN-221ENST00000504335 TSPYL1Q9H0U9 437 aa17.03■□□□□ 0.32
SMTN-221ENST00000504335 YY1AP1Q9H869 796 aa17.03■□□□□ 0.32
SMTN-221ENST00000504335 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
SMTN-221ENST00000504335 BRD4O60885 1362 aaPredicted RBP17.03■□□□□ 0.32
SMTN-221ENST00000504335 AMER1Q5JTC6 1135 aaPredicted RBP17.02■□□□□ 0.32
SMTN-221ENST00000504335 HMGN5P82970 282 aaKnown RBP17.02■□□□□ 0.32
SMTN-221ENST00000504335 ATP2B3Q16720 1220 aa17.02■□□□□ 0.32
SMTN-221ENST00000504335 PRIMPOLQ96LW4 560 aa17.02■□□□□ 0.32
SMTN-221ENST00000504335 HDAC5Q9UQL6 1122 aa17.02■□□□□ 0.32
SMTN-221ENST00000504335 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.31
SMTN-221ENST00000504335 TBC1D32Q96NH3 1257 aa17.01■□□□□ 0.31
SMTN-221ENST00000504335 CCDC144AA2RUR9 1427 aa17.01■□□□□ 0.31
SMTN-221ENST00000504335 MAPK8IP3Q9UPT6 1336 aa17.01■□□□□ 0.31
SMTN-221ENST00000504335 RBM25P49756 843 aaKnown RBP17.01■□□□□ 0.31
SMTN-221ENST00000504335 ROCK2O75116 1388 aaKnown RBP17.01■□□□□ 0.31
SMTN-221ENST00000504335 NINLQ9Y2I6 1382 aa17.01■□□□□ 0.31
SMTN-221ENST00000504335 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
SMTN-221ENST00000504335 GTF2F1P35269 517 aaKnown RBP eCLIP17■□□□□ 0.31
SMTN-221ENST00000504335 GBP4Q96PP9 640 aa17■□□□□ 0.31
SMTN-221ENST00000504335 LRRC9Q6ZRR7 1453 aa17■□□□□ 0.31
SMTN-221ENST00000504335 EIF2AK3Q9NZJ5 1116 aaKnown RBP17■□□□□ 0.31
SMTN-221ENST00000504335 GABPB1Q06547 395 aaPredicted RBP16.99■□□□□ 0.31
SMTN-221ENST00000504335 ZNF710Q8N1W2 664 aa16.99■□□□□ 0.31
SMTN-221ENST00000504335 TIGD1Q96MW7 591 aa16.99■□□□□ 0.31
SMTN-221ENST00000504335 GEMIN8Q9NWZ8 242 aaKnown RBP16.99■□□□□ 0.31
SMTN-221ENST00000504335 SEC24BO95487 1268 aa16.98■□□□□ 0.31
SMTN-221ENST00000504335 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
SMTN-221ENST00000504335 ZNF622Q969S3 477 aaKnown RBP eCLIP16.98■□□□□ 0.31
SMTN-221ENST00000504335 PDLIM2Q96JY6 352 aa16.98■□□□□ 0.31
SMTN-221ENST00000504335 SPATA31E1Q6ZUB1 1445 aa16.97■□□□□ 0.31
SMTN-221ENST00000504335 KIF3AQ9Y496 699 aa16.97■□□□□ 0.31
SMTN-221ENST00000504335 PSEN1P49768 467 aa16.97■□□□□ 0.31
SMTN-221ENST00000504335 PANK3Q9H999 370 aa16.97■□□□□ 0.31
SMTN-221ENST00000504335 PRXQ9BXM0 1461 aa16.96■□□□□ 0.31
SMTN-221ENST00000504335 APPP05067 770 aa16.96■□□□□ 0.31
SMTN-221ENST00000504335 CNKSR2Q8WXI2 1034 aa16.96■□□□□ 0.31
SMTN-221ENST00000504335 FEZ1Q99689 392 aa16.96■□□□□ 0.31
SMTN-221ENST00000504335 HAP1P54257 671 aaPredicted RBP16.96■□□□□ 0.3
SMTN-221ENST00000504335 CNPY4Q8N129 248 aa16.96■□□□□ 0.3
SMTN-221ENST00000504335 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.95■□□□□ 0.3
SMTN-221ENST00000504335 HFM1A2PYH4 1435 aa16.94■□□□□ 0.3
SMTN-221ENST00000504335 C20orf194Q5TEA3 1177 aa16.94■□□□□ 0.3
SMTN-221ENST00000504335 CCDC39Q9UFE4 941 aa16.94■□□□□ 0.3
SMTN-221ENST00000504335 ZMYM3Q14202 1370 aa16.94■□□□□ 0.3
SMTN-221ENST00000504335 TULP2O00295 520 aa16.94■□□□□ 0.3
SMTN-221ENST00000504335 MAPK8IP2Q13387 824 aaPredicted RBP16.93■□□□□ 0.3
SMTN-221ENST00000504335 HSP90AB1P08238 724 aaKnown RBP16.93■□□□□ 0.3
SMTN-221ENST00000504335 CERS3Q8IU89 383 aa16.93■□□□□ 0.3
SMTN-221ENST00000504335 PDCL2Q8N4E4 241 aa16.93■□□□□ 0.3
SMTN-221ENST00000504335 CIZ1Q9ULV3 898 aaPredicted RBP16.93■□□□□ 0.3
SMTN-221ENST00000504335 ARHGAP35Q9NRY4 1499 aa16.92■□□□□ 0.3
SMTN-221ENST00000504335 MIA2Q96PC5 1412 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms