RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 PTMSP20962 102 aa7.64□□□□□ -1.19
LINC01340-201ENST00000504012 RIPK4P57078 832 aa7.64□□□□□ -1.19
LINC01340-201ENST00000504012 KIAA1211Q6ZU35 1233 aa7.64□□□□□ -1.19
LINC01340-201ENST00000504012 CENPQQ7L2Z9 268 aaPredicted RBP7.64□□□□□ -1.19
LINC01340-201ENST00000504012 EXOC6Q8TAG9 804 aa7.64□□□□□ -1.19
LINC01340-201ENST00000504012 ANP32BQ92688 251 aaKnown RBP7.64□□□□□ -1.19
LINC01340-201ENST00000504012 TRIM44Q96DX7 344 aaPredicted RBP7.64□□□□□ -1.19
LINC01340-201ENST00000504012 UACAQ9BZF9 1416 aa7.63□□□□□ -1.19
LINC01340-201ENST00000504012 IGSF3O75054 1194 aa7.63□□□□□ -1.19
LINC01340-201ENST00000504012 HSPA5P11021 654 aaKnown RBP7.63□□□□□ -1.19
LINC01340-201ENST00000504012 TEX2Q8IWB9 1127 aa7.63□□□□□ -1.19
LINC01340-201ENST00000504012 PPP1R9BQ96SB3 815 aa7.63□□□□□ -1.19
LINC01340-201ENST00000504012 TMEM51Q9NW97 253 aa7.63□□□□□ -1.19
LINC01340-201ENST00000504012 ZMYM4Q5VZL5 1548 aa7.62□□□□□ -1.19
LINC01340-201ENST00000504012 MYOM3Q5VTT5 1437 aa7.62□□□□□ -1.19
LINC01340-201ENST00000504012 LRPPRCP42704 1394 aaKnown RBP7.62□□□□□ -1.19
LINC01340-201ENST00000504012 ZMYM3Q14202 1370 aa7.62□□□□□ -1.19
LINC01340-201ENST00000504012 KDM2BQ8NHM5 1336 aa7.62□□□□□ -1.19
LINC01340-201ENST00000504012 SLC20A2Q08357 652 aa7.62□□□□□ -1.19
LINC01340-201ENST00000504012 PPP4R3BQ5MIZ7 849 aa7.62□□□□□ -1.19
LINC01340-201ENST00000504012 ZSCAN30Q86W11 494 aa7.62□□□□□ -1.19
LINC01340-201ENST00000504012 HIRIP3Q9BW71 556 aaPredicted RBP7.62□□□□□ -1.19
LINC01340-201ENST00000504012 CCDC94Q9BW85 323 aaPredicted RBP7.62□□□□□ -1.19
LINC01340-201ENST00000504012 ANTXR1Q9H6X2 564 aa7.62□□□□□ -1.19
LINC01340-201ENST00000504012 RCAN3Q9UKA8 241 aa7.62□□□□□ -1.19
LINC01340-201ENST00000504012 PRXQ9BXM0 1461 aa7.62□□□□□ -1.19
LINC01340-201ENST00000504012 CSPP1Q1MSJ5 1256 aa7.61□□□□□ -1.19
LINC01340-201ENST00000504012 C8orf34Q49A92 452 aa7.61□□□□□ -1.19
LINC01340-201ENST00000504012 GRPEL1Q9HAV7 217 aa7.61□□□□□ -1.19
LINC01340-201ENST00000504012 ZSCAN20P17040 1043 aaPredicted RBP7.6□□□□□ -1.19
LINC01340-201ENST00000504012 MCM4P33991 863 aa7.6□□□□□ -1.19
LINC01340-201ENST00000504012 MCM5P33992 734 aa7.6□□□□□ -1.19
LINC01340-201ENST00000504012 CCDC173Q0VFZ6 552 aa7.6□□□□□ -1.19
LINC01340-201ENST00000504012 SKOR2Q2VWA4 1001 aaPredicted RBP7.6□□□□□ -1.19
LINC01340-201ENST00000504012 PNISRQ8TF01 805 aaKnown RBP7.6□□□□□ -1.19
LINC01340-201ENST00000504012 TIAM1Q13009 1591 aa7.59□□□□□ -1.19
LINC01340-201ENST00000504012 ZNF500O60304 480 aaPredicted RBP7.59□□□□□ -1.19
LINC01340-201ENST00000504012 SLC4A3P48751 1232 aa7.59□□□□□ -1.19
LINC01340-201ENST00000504012 ARID3AQ99856 593 aa7.59□□□□□ -1.19
LINC01340-201ENST00000504012 CCDC18Q5T9S5 1454 aa7.59□□□□□ -1.19
LINC01340-201ENST00000504012 ERBB4Q15303 1308 aa7.58□□□□□ -1.2
LINC01340-201ENST00000504012 DDX11L8A8MPP1 907 aa7.58□□□□□ -1.2
LINC01340-201ENST00000504012 DHX37Q8IY37 1157 aaKnown RBP7.58□□□□□ -1.2
LINC01340-201ENST00000504012 CHMP4BQ9H444 224 aaKnown RBP7.58□□□□□ -1.2
LINC01340-201ENST00000504012 FOXD4L1Q9NU39 408 aa7.58□□□□□ -1.2
LINC01340-201ENST00000504012 BRD4O60885 1362 aaPredicted RBP7.58□□□□□ -1.2
LINC01340-201ENST00000504012 TRAK2O60296 914 aa7.57□□□□□ -1.2
LINC01340-201ENST00000504012 ROCK2O75116 1388 aaKnown RBP7.57□□□□□ -1.2
LINC01340-201ENST00000504012 VIRMAQ69YN4 1812 aaKnown RBP7.57□□□□□ -1.2
LINC01340-201ENST00000504012 LRRC9Q6ZRR7 1453 aa7.56□□□□□ -1.2
LINC01340-201ENST00000504012 SPATA31E1Q6ZUB1 1445 aa7.56□□□□□ -1.2
LINC01340-201ENST00000504012 SP7Q8TDD2 431 aaPredicted RBP7.56□□□□□ -1.2
LINC01340-201ENST00000504012 PANK2Q9BZ23 570 aa7.56□□□□□ -1.2
LINC01340-201ENST00000504012 CHMP5Q9NZZ3 219 aa7.56□□□□□ -1.2
LINC01340-201ENST00000504012 DHX29Q7Z478 1369 aaKnown RBP7.56□□□□□ -1.2
LINC01340-201ENST00000504012 IBTKQ9P2D0 1353 aaPredicted RBP7.56□□□□□ -1.2
LINC01340-201ENST00000504012 USP19O94966 1318 aa7.55□□□□□ -1.2
LINC01340-201ENST00000504012 HFM1A2PYH4 1435 aa7.55□□□□□ -1.2
LINC01340-201ENST00000504012 MIA2Q96PC5 1412 aa7.55□□□□□ -1.2
LINC01340-201ENST00000504012 PLEKHH2Q8IVE3 1493 aa7.55□□□□□ -1.2
LINC01340-201ENST00000504012 MSNP26038 577 aaKnown RBP7.54□□□□□ -1.2
LINC01340-201ENST00000504012 MMP14P50281 582 aa7.54□□□□□ -1.2
LINC01340-201ENST00000504012 FAM193AP78312 1265 aa7.54□□□□□ -1.2
LINC01340-201ENST00000504012 SASS6Q6UVJ0 657 aa7.54□□□□□ -1.2
LINC01340-201ENST00000504012 PAXIP1Q6ZW49 1069 aaPredicted RBP7.54□□□□□ -1.2
LINC01340-201ENST00000504012 FAM13BQ9NYF5 915 aa7.54□□□□□ -1.2
LINC01340-201ENST00000504012 ZHX1Q9UKY1 873 aaPredicted RBP7.54□□□□□ -1.2
LINC01340-201ENST00000504012 NOL7Q9UMY1 257 aaKnown RBP7.54□□□□□ -1.2
LINC01340-201ENST00000504012 RBM25P49756 843 aaKnown RBP7.53□□□□□ -1.2
LINC01340-201ENST00000504012 ZNF830Q96NB3 372 aaPredicted RBP7.53□□□□□ -1.2
LINC01340-201ENST00000504012 DNAJC2Q99543 621 aaKnown RBP7.53□□□□□ -1.2
LINC01340-201ENST00000504012 TSPYL1Q9H0U9 437 aa7.53□□□□□ -1.2
LINC01340-201ENST00000504012 MAPK8IP3Q9UPT6 1336 aa7.52□□□□□ -1.2
LINC01340-201ENST00000504012 ARHGAP35Q9NRY4 1499 aa7.52□□□□□ -1.21
LINC01340-201ENST00000504012 RALBP1Q15311 655 aa7.52□□□□□ -1.21
LINC01340-201ENST00000504012 CIZ1Q9ULV3 898 aaPredicted RBP7.52□□□□□ -1.21
LINC01340-201ENST00000504012 KIF7Q2M1P5 1343 aa7.52□□□□□ -1.21
LINC01340-201ENST00000504012 EIF3AQ14152 1382 aaKnown RBP7.51□□□□□ -1.21
LINC01340-201ENST00000504012 UQCRHLA0A096LP55 91 aa7.51□□□□□ -1.21
LINC01340-201ENST00000504012 UQCRHP07919 91 aa7.51□□□□□ -1.21
LINC01340-201ENST00000504012 GTF2F1P35269 517 aaKnown RBP eCLIP7.51□□□□□ -1.21
LINC01340-201ENST00000504012 DNAJC5Q9H3Z4 198 aa7.51□□□□□ -1.21
LINC01340-201ENST00000504012 YY1AP1Q9H869 796 aa7.51□□□□□ -1.21
LINC01340-201ENST00000504012 FMN1Q68DA7 1419 aa7.51□□□□□ -1.21
LINC01340-201ENST00000504012 CFAP43Q8NDM7 1665 aa7.51□□□□□ -1.21
LINC01340-201ENST00000504012 NINLQ9Y2I6 1382 aa7.5□□□□□ -1.21
LINC01340-201ENST00000504012 CLGNO14967 610 aa7.5□□□□□ -1.21
LINC01340-201ENST00000504012 HMGN5P82970 282 aaKnown RBP7.5□□□□□ -1.21
LINC01340-201ENST00000504012 AXDND1Q5T1B0 1012 aaPredicted RBP7.5□□□□□ -1.21
LINC01340-201ENST00000504012 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.5□□□□□ -1.21
LINC01340-201ENST00000504012 TMC1Q8TDI8 760 aa7.5□□□□□ -1.21
LINC01340-201ENST00000504012 ZFP91Q96JP5 570 aaPredicted RBP7.5□□□□□ -1.21
LINC01340-201ENST00000504012 PRIMPOLQ96LW4 560 aa7.5□□□□□ -1.21
LINC01340-201ENST00000504012 CRBNQ96SW2 442 aa7.5□□□□□ -1.21
LINC01340-201ENST00000504012 POLR3GLQ9BT43 218 aa7.5□□□□□ -1.21
LINC01340-201ENST00000504012 UPF2Q9HAU5 1272 aaKnown RBP7.5□□□□□ -1.21
LINC01340-201ENST00000504012 ARHGAP31Q2M1Z3 1444 aa7.5□□□□□ -1.21
LINC01340-201ENST00000504012 SMARCA4P51532 1647 aa7.49□□□□□ -1.21
LINC01340-201ENST00000504012 TOP2BQ02880 1626 aa7.49□□□□□ -1.21
LINC01340-201ENST00000504012 PTPN23Q9H3S7 1636 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms