RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 COL9A1P20849 921 aa12.22□□□□□ -0.45
NFKB1-203ENST00000502367 PBX2P40425 430 aa12.22□□□□□ -0.45
NFKB1-203ENST00000502367 TSR1Q2NL82 804 aaKnown RBP12.21□□□□□ -0.45
NFKB1-203ENST00000502367 OSBPP22059 807 aa12.19□□□□□ -0.46
NFKB1-203ENST00000502367 PTPREP23469 700 aa12.19□□□□□ -0.46
NFKB1-203ENST00000502367 MMRN1Q13201 1228 aa12.19□□□□□ -0.46
NFKB1-203ENST00000502367 C6orf132Q5T0Z8 1188 aa12.18□□□□□ -0.46
NFKB1-203ENST00000502367 EPAS1Q99814 870 aa12.18□□□□□ -0.46
NFKB1-203ENST00000502367 ADGRD1Q6QNK2 874 aa12.17□□□□□ -0.46
NFKB1-203ENST00000502367 P3H3Q8IVL6 736 aa12.17□□□□□ -0.46
NFKB1-203ENST00000502367 MAP3K7O43318 606 aa12.16□□□□□ -0.46
NFKB1-203ENST00000502367 PROX2Q3B8N5 592 aa12.16□□□□□ -0.46
NFKB1-203ENST00000502367 EN1Q05925 392 aaPredicted RBP12.15□□□□□ -0.46
NFKB1-203ENST00000502367 FBXW7Q969H0 707 aa12.15□□□□□ -0.46
NFKB1-203ENST00000502367 ZBED2Q9BTP6 218 aa12.14□□□□□ -0.47
NFKB1-203ENST00000502367 CDHR5Q9HBB8 845 aa12.14□□□□□ -0.47
NFKB1-203ENST00000502367 VPS9D1Q9Y2B5 631 aa12.13□□□□□ -0.47
NFKB1-203ENST00000502367 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
NFKB1-203ENST00000502367 HRO43593 1189 aa12.1□□□□□ -0.47
NFKB1-203ENST00000502367 PPP1R3GB7ZBB8 358 aa12.08□□□□□ -0.48
NFKB1-203ENST00000502367 MYT1LQ9UL68 1186 aa12.08□□□□□ -0.48
NFKB1-203ENST00000502367 TK2O00142 265 aa12.07□□□□□ -0.48
NFKB1-203ENST00000502367 TESPA1A2RU30 521 aaPredicted RBP12.05□□□□□ -0.48
NFKB1-203ENST00000502367 RBM26Q5T8P6 1007 aaKnown RBP12.04□□□□□ -0.48
NFKB1-203ENST00000502367 NPDC1Q9NQX5 325 aaPredicted RBP12.04□□□□□ -0.48
NFKB1-203ENST00000502367 FAM198AQ9UFP1 575 aa12.04□□□□□ -0.48
NFKB1-203ENST00000502367 BHMG1C9JSJ3 638 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-203ENST00000502367 C3orf80F5H4A9 247 aa12.03□□□□□ -0.48
NFKB1-203ENST00000502367 KIAA1468Q9P260 1216 aa12.03□□□□□ -0.48
NFKB1-203ENST00000502367 RNF166Q96A37 237 aaPredicted RBP12.02□□□□□ -0.49
NFKB1-203ENST00000502367 SLC4A5Q9BY07 1137 aa12.02□□□□□ -0.49
NFKB1-203ENST00000502367 TSKSQ9UJT2 592 aa12.02□□□□□ -0.49
NFKB1-203ENST00000502367 NUTM2FA1L443 756 aa11.99□□□□□ -0.49
NFKB1-203ENST00000502367 CDCA7LQ96GN5 454 aa11.99□□□□□ -0.49
NFKB1-203ENST00000502367 SEPT9Q9UHD8 586 aaPredicted RBP11.99□□□□□ -0.49
NFKB1-203ENST00000502367 TRIM6-TRIM34B2RNG4 842 aa11.98□□□□□ -0.49
NFKB1-203ENST00000502367 SMAPO00193 183 aa11.98□□□□□ -0.49
NFKB1-203ENST00000502367 PRSS12P56730 875 aa11.97□□□□□ -0.49
NFKB1-203ENST00000502367 KCTD12Q96CX2 325 aaKnown RBP11.97□□□□□ -0.49
NFKB1-203ENST00000502367 STAC3Q96MF2 364 aa11.97□□□□□ -0.49
NFKB1-203ENST00000502367 RABGEF1Q9UJ41 708 aa11.96□□□□□ -0.49
NFKB1-203ENST00000502367 MRPL50Q8N5N7 158 aaKnown RBP11.95□□□□□ -0.5
NFKB1-203ENST00000502367 PADI6Q6TGC4 694 aa11.94□□□□□ -0.5
NFKB1-203ENST00000502367 PTGDRQ13258 359 aa11.92□□□□□ -0.5
NFKB1-203ENST00000502367 FAM161AQ3B820 660 aa11.92□□□□□ -0.5
NFKB1-203ENST00000502367 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
NFKB1-203ENST00000502367 FECHP22830 423 aa11.89□□□□□ -0.51
NFKB1-203ENST00000502367 NBPF3Q9H094 633 aa11.89□□□□□ -0.51
NFKB1-203ENST00000502367 GOLGA8CPA6NN73 597 aa11.88□□□□□ -0.51
NFKB1-203ENST00000502367 PTPN5P54829 565 aa11.88□□□□□ -0.51
NFKB1-203ENST00000502367 NUDT18Q6ZVK8 323 aa11.88□□□□□ -0.51
NFKB1-203ENST00000502367 PACS2Q86VP3 889 aa11.88□□□□□ -0.51
NFKB1-203ENST00000502367 CERKQ8TCT0 537 aa11.88□□□□□ -0.51
NFKB1-203ENST00000502367 PNMA3Q9UL41 463 aa11.88□□□□□ -0.51
NFKB1-203ENST00000502367 ONECUT3O60422 494 aaPredicted RBP11.87□□□□□ -0.51
NFKB1-203ENST00000502367 SMYD5Q6GMV2 418 aa11.87□□□□□ -0.51
NFKB1-203ENST00000502367 TATDN2Q93075 761 aa11.87□□□□□ -0.51
NFKB1-203ENST00000502367 WNT2BQ93097 391 aa11.87□□□□□ -0.51
NFKB1-203ENST00000502367 TTC13Q8NBP0 860 aa11.86□□□□□ -0.51
NFKB1-203ENST00000502367 ZFRQ96KR1 1074 aaKnown RBP11.86□□□□□ -0.51
NFKB1-203ENST00000502367 GPR37O15354 613 aa11.85□□□□□ -0.51
NFKB1-203ENST00000502367 BCAMP50895 628 aa11.85□□□□□ -0.51
NFKB1-203ENST00000502367 FCHSD2O94868 740 aa11.83□□□□□ -0.52
NFKB1-203ENST00000502367 FAM98CQ17RN3 349 aaKnown RBP11.82□□□□□ -0.52
NFKB1-203ENST00000502367 THSD4Q6ZMP0 1018 aa11.82□□□□□ -0.52
NFKB1-203ENST00000502367 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.8□□□□□ -0.52
NFKB1-203ENST00000502367 LAPTM4BQ86VI4 370 aa11.8□□□□□ -0.52
NFKB1-203ENST00000502367 SAMD7Q7Z3H4 446 aa11.79□□□□□ -0.52
NFKB1-203ENST00000502367 GPIHBP1Q8IV16 184 aa11.79□□□□□ -0.52
NFKB1-203ENST00000502367 RBM27Q9P2N5 1060 aaKnown RBP11.79□□□□□ -0.52
NFKB1-203ENST00000502367 NBPF26B4DH59 902 aa11.78□□□□□ -0.52
NFKB1-203ENST00000502367 ANKK1Q8NFD2 765 aa11.78□□□□□ -0.52
NFKB1-203ENST00000502367 EYA1Q99502 592 aa11.78□□□□□ -0.52
NFKB1-203ENST00000502367 ADGRG1Q9Y653 693 aa11.77□□□□□ -0.53
NFKB1-203ENST00000502367 HCSTQ9UBK5 93 aa11.76□□□□□ -0.53
NFKB1-203ENST00000502367 SOWAHBA6NEL2 793 aa11.75□□□□□ -0.53
NFKB1-203ENST00000502367 GNPATO15228 680 aa11.75□□□□□ -0.53
NFKB1-203ENST00000502367 HIC1Q14526 733 aa11.75□□□□□ -0.53
NFKB1-203ENST00000502367 LMOD2Q6P5Q4 547 aa11.75□□□□□ -0.53
NFKB1-203ENST00000502367 NLRP7Q8WX94 980 aa11.75□□□□□ -0.53
NFKB1-203ENST00000502367 WBP1LQ9NX94 342 aa11.74□□□□□ -0.53
NFKB1-203ENST00000502367 SWT1Q5T5J6 900 aaKnown RBP11.73□□□□□ -0.53
NFKB1-203ENST00000502367 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.73□□□□□ -0.53
NFKB1-203ENST00000502367 LRCH3Q96II8 777 aa11.71□□□□□ -0.53
NFKB1-203ENST00000502367 HPS5Q9UPZ3 1129 aa11.71□□□□□ -0.53
NFKB1-203ENST00000502367 TULP1O00294 542 aaPredicted RBP11.7□□□□□ -0.54
NFKB1-203ENST00000502367 RNF40O75150 1001 aa11.7□□□□□ -0.54
NFKB1-203ENST00000502367 RCCD1A6NED2 376 aa11.69□□□□□ -0.54
NFKB1-203ENST00000502367 PHOX2BQ99453 314 aa11.69□□□□□ -0.54
NFKB1-203ENST00000502367 RBM46Q8TBY0 533 aaKnown RBP11.67□□□□□ -0.54
NFKB1-203ENST00000502367 PXYLP1Q8TE99 480 aa11.67□□□□□ -0.54
NFKB1-203ENST00000502367 METTL3Q86U44 580 aaKnown RBP11.65□□□□□ -0.54
NFKB1-203ENST00000502367 TSR3Q9UJK0 312 aaKnown RBP11.65□□□□□ -0.54
NFKB1-203ENST00000502367 PPP4CP60510 307 aa11.64□□□□□ -0.55
NFKB1-203ENST00000502367 ZC3H15Q8WU90 426 aaKnown RBP11.64□□□□□ -0.55
NFKB1-203ENST00000502367 DNAJB2P25686 324 aa11.62□□□□□ -0.55
NFKB1-203ENST00000502367 HDGFP51858 240 aaKnown RBP11.62□□□□□ -0.55
NFKB1-203ENST00000502367 TMEM134Q9H6X4 195 aa11.62□□□□□ -0.55
NFKB1-203ENST00000502367 OATP04181 439 aa11.61□□□□□ -0.55
NFKB1-203ENST00000502367 PLA2G2EQ9NZK7 142 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms