RNA–Protein interactions for RNA: ENST00000499125.3

HMGN1P12-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 12, humanhuman

BASIC

Gene HMGN1P12, Length 195 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P12-201ENST00000499125 WNT2BQ93097 391 aa9.58□□□□□ -0.88
HMGN1P12-201ENST00000499125 THSD4Q6ZMP0 1018 aa9.56□□□□□ -0.88
HMGN1P12-201ENST00000499125 COL9A1P20849 921 aa9.55□□□□□ -0.88
HMGN1P12-201ENST00000499125 EPAS1Q99814 870 aa9.55□□□□□ -0.88
HMGN1P12-201ENST00000499125 RABGEF1Q9UJ41 708 aa9.55□□□□□ -0.88
HMGN1P12-201ENST00000499125 PROX2Q3B8N5 592 aa9.54□□□□□ -0.88
HMGN1P12-201ENST00000499125 C6orf132Q5T0Z8 1188 aa9.52□□□□□ -0.89
HMGN1P12-201ENST00000499125 DDX12PQ92771 950 aa9.52□□□□□ -0.89
HMGN1P12-201ENST00000499125 RBM33Q96EV2 1170 aaKnown RBP9.51□□□□□ -0.89
HMGN1P12-201ENST00000499125 RTN4Q9NQC3 1192 aaKnown RBP9.51□□□□□ -0.89
HMGN1P12-201ENST00000499125 PAXIP1Q6ZW49 1069 aaPredicted RBP9.5□□□□□ -0.89
HMGN1P12-201ENST00000499125 CFAP44Q96MT7 982 aa9.5□□□□□ -0.89
HMGN1P12-201ENST00000499125 KIAA1468Q9P260 1216 aa9.5□□□□□ -0.89
HMGN1P12-201ENST00000499125 ANKK1Q8NFD2 765 aa9.49□□□□□ -0.89
HMGN1P12-201ENST00000499125 WDR70Q9NW82 654 aa9.48□□□□□ -0.89
HMGN1P12-201ENST00000499125 ONECUT3O60422 494 aaPredicted RBP9.47□□□□□ -0.89
HMGN1P12-201ENST00000499125 LAPTM4BQ86VI4 370 aa9.47□□□□□ -0.89
HMGN1P12-201ENST00000499125 E2F4Q16254 413 aa9.46□□□□□ -0.9
HMGN1P12-201ENST00000499125 SPDYE16A6NNV3 312 aaPredicted RBP9.45□□□□□ -0.9
HMGN1P12-201ENST00000499125 NBR1Q14596 966 aa9.45□□□□□ -0.9
HMGN1P12-201ENST00000499125 PDIA6Q15084 440 aa9.45□□□□□ -0.9
HMGN1P12-201ENST00000499125 TRIM6-TRIM34B2RNG4 842 aa9.44□□□□□ -0.9
HMGN1P12-201ENST00000499125 MAP3K7O43318 606 aa9.44□□□□□ -0.9
HMGN1P12-201ENST00000499125 ZFRQ96KR1 1074 aaKnown RBP9.44□□□□□ -0.9
HMGN1P12-201ENST00000499125 BCAMP50895 628 aa9.43□□□□□ -0.9
HMGN1P12-201ENST00000499125 IFFO2Q5TF58 517 aa9.43□□□□□ -0.9
HMGN1P12-201ENST00000499125 SEPT9Q9UHD8 586 aaPredicted RBP9.43□□□□□ -0.9
HMGN1P12-201ENST00000499125 SOWAHBA6NEL2 793 aa9.42□□□□□ -0.9
HMGN1P12-201ENST00000499125 EN1Q05925 392 aaPredicted RBP9.42□□□□□ -0.9
HMGN1P12-201ENST00000499125 TSR1Q2NL82 804 aaKnown RBP9.41□□□□□ -0.9
HMGN1P12-201ENST00000499125 PACS2Q86VP3 889 aa9.4□□□□□ -0.9
HMGN1P12-201ENST00000499125 GRXCR2A6NFK2 248 aa9.39□□□□□ -0.91
HMGN1P12-201ENST00000499125 FAM98CQ17RN3 349 aaKnown RBP9.39□□□□□ -0.91
HMGN1P12-201ENST00000499125 ARIH1Q9Y4X5 557 aaPredicted RBP9.38□□□□□ -0.91
HMGN1P12-201ENST00000499125 NYAP1Q6ZVC0 841 aa9.37□□□□□ -0.91
HMGN1P12-201ENST00000499125 WBP1LQ9NX94 342 aa9.37□□□□□ -0.91
HMGN1P12-201ENST00000499125 A0A0G2JS52 829 aa9.36□□□□□ -0.91
HMGN1P12-201ENST00000499125 LRCH3Q96II8 777 aa9.36□□□□□ -0.91
HMGN1P12-201ENST00000499125 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.36□□□□□ -0.91
HMGN1P12-201ENST00000499125 TSKSQ9UJT2 592 aa9.36□□□□□ -0.91
HMGN1P12-201ENST00000499125 RGS20O76081 388 aa9.35□□□□□ -0.91
HMGN1P12-201ENST00000499125 CERKQ8TCT0 537 aa9.34□□□□□ -0.91
HMGN1P12-201ENST00000499125 CDCA7LQ96GN5 454 aa9.34□□□□□ -0.91
HMGN1P12-201ENST00000499125 TSR3Q9UJK0 312 aaKnown RBP9.34□□□□□ -0.91
HMGN1P12-201ENST00000499125 ITGBL1O95965 494 aaPredicted RBP9.33□□□□□ -0.92
HMGN1P12-201ENST00000499125 PRSS12P56730 875 aa9.33□□□□□ -0.92
HMGN1P12-201ENST00000499125 HPS5Q9UPZ3 1129 aa9.33□□□□□ -0.92
HMGN1P12-201ENST00000499125 PRIM1P49642 420 aaKnown RBP9.32□□□□□ -0.92
HMGN1P12-201ENST00000499125 SMAPO00193 183 aa9.31□□□□□ -0.92
HMGN1P12-201ENST00000499125 OSBPP22059 807 aa9.3□□□□□ -0.92
HMGN1P12-201ENST00000499125 KCNC4Q03721 635 aa9.3□□□□□ -0.92
HMGN1P12-201ENST00000499125 PPP4CP60510 307 aa9.29□□□□□ -0.92
HMGN1P12-201ENST00000499125 TATDN2Q93075 761 aa9.28□□□□□ -0.92
HMGN1P12-201ENST00000499125 FAM198AQ9UFP1 575 aa9.28□□□□□ -0.92
HMGN1P12-201ENST00000499125 PNMA3Q9UL41 463 aa9.28□□□□□ -0.92
HMGN1P12-201ENST00000499125 NBPF26B4DH59 902 aa9.27□□□□□ -0.93
HMGN1P12-201ENST00000499125 SAMD7Q7Z3H4 446 aa9.27□□□□□ -0.93
HMGN1P12-201ENST00000499125 CDHR5Q9HBB8 845 aa9.27□□□□□ -0.93
HMGN1P12-201ENST00000499125 HDGFP51858 240 aaKnown RBP9.26□□□□□ -0.93
HMGN1P12-201ENST00000499125 IRX2Q9BZI1 471 aaPredicted RBP9.26□□□□□ -0.93
HMGN1P12-201ENST00000499125 TSHZ2Q9NRE2 1034 aa9.25□□□□□ -0.93
HMGN1P12-201ENST00000499125 C3orf80F5H4A9 247 aa9.24□□□□□ -0.93
HMGN1P12-201ENST00000499125 NUDT18Q6ZVK8 323 aa9.24□□□□□ -0.93
HMGN1P12-201ENST00000499125 RBM27Q9P2N5 1060 aaKnown RBP9.23□□□□□ -0.93
HMGN1P12-201ENST00000499125 ARHGEF1Q92888 912 aaKnown RBP9.22□□□□□ -0.93
HMGN1P12-201ENST00000499125 RNF40O75150 1001 aa9.21□□□□□ -0.94
HMGN1P12-201ENST00000499125 NPDC1Q9NQX5 325 aaPredicted RBP9.2□□□□□ -0.94
HMGN1P12-201ENST00000499125 PADI6Q6TGC4 694 aa9.19□□□□□ -0.94
HMGN1P12-201ENST00000499125 MLLT3P42568 568 aaPredicted RBP9.17□□□□□ -0.94
HMGN1P12-201ENST00000499125 TJAP1Q5JTD0 557 aa9.17□□□□□ -0.94
HMGN1P12-201ENST00000499125 TTC13Q8NBP0 860 aa9.17□□□□□ -0.94
HMGN1P12-201ENST00000499125 KCNV2Q8TDN2 545 aa9.17□□□□□ -0.94
HMGN1P12-201ENST00000499125 MTRQ99707 1265 aa9.15□□□□□ -0.94
HMGN1P12-201ENST00000499125 IL21Q9HBE4 155 aa9.15□□□□□ -0.94
HMGN1P12-201ENST00000499125 SLC4A3P48751 1232 aa9.14□□□□□ -0.95
HMGN1P12-201ENST00000499125 SWT1Q5T5J6 900 aaKnown RBP9.14□□□□□ -0.95
HMGN1P12-201ENST00000499125 NECTIN2Q92692 538 aa9.14□□□□□ -0.95
HMGN1P12-201ENST00000499125 SLF2Q8IX21 1173 aa9.13□□□□□ -0.95
HMGN1P12-201ENST00000499125 APLP1P51693 650 aa9.12□□□□□ -0.95
HMGN1P12-201ENST00000499125 EYA1Q99502 592 aa9.12□□□□□ -0.95
HMGN1P12-201ENST00000499125 ZNF516Q92618 1163 aa9.1□□□□□ -0.95
HMGN1P12-201ENST00000499125 NUTM2FA1L443 756 aa9.09□□□□□ -0.95
HMGN1P12-201ENST00000499125 PTGDRQ13258 359 aa9.09□□□□□ -0.95
HMGN1P12-201ENST00000499125 P3H3Q8IVL6 736 aa9.09□□□□□ -0.95
HMGN1P12-201ENST00000499125 PPP1R18Q6NYC8 613 aa9.08□□□□□ -0.96
HMGN1P12-201ENST00000499125 Q6ZNB5 142 aa9.08□□□□□ -0.96
HMGN1P12-201ENST00000499125 COPS2P61201 443 aa9.07□□□□□ -0.96
HMGN1P12-201ENST00000499125 RBM46Q8TBY0 533 aaKnown RBP9.06□□□□□ -0.96
HMGN1P12-201ENST00000499125 PRKD2Q9BZL6 878 aa9.06□□□□□ -0.96
HMGN1P12-201ENST00000499125 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.06□□□□□ -0.96
HMGN1P12-201ENST00000499125 DNAJB2P25686 324 aa9.05□□□□□ -0.96
HMGN1P12-201ENST00000499125 NKX2-3Q8TAU0 364 aa9.05□□□□□ -0.96
HMGN1P12-201ENST00000499125 PRR14Q9BWN1 585 aa9.05□□□□□ -0.96
HMGN1P12-201ENST00000499125 SEMA3EO15041 775 aa9.04□□□□□ -0.96
HMGN1P12-201ENST00000499125 LAPTM4AQ15012 233 aa9.04□□□□□ -0.96
HMGN1P12-201ENST00000499125 GFRA3O60609 400 aa9.03□□□□□ -0.96
HMGN1P12-201ENST00000499125 GGCXP38435 758 aa9.03□□□□□ -0.96
HMGN1P12-201ENST00000499125 ADGRG1Q9Y653 693 aa9.03□□□□□ -0.96
HMGN1P12-201ENST00000499125 FCHSD2O94868 740 aa9.02□□□□□ -0.97
HMGN1P12-201ENST00000499125 PCDHB3Q9Y5E6 796 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms