RNA–Protein interactions for RNA: ENST00000496183.5

RBM39-241, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-241ENST00000496183 MAP3K7O43318 606 aa11.85□□□□□ -0.51
RBM39-241ENST00000496183 EN1Q05925 392 aaPredicted RBP11.85□□□□□ -0.51
RBM39-241ENST00000496183 TK2O00142 265 aa11.84□□□□□ -0.51
RBM39-241ENST00000496183 PSEN2P49810 448 aa11.84□□□□□ -0.51
RBM39-241ENST00000496183 RBM33Q96EV2 1170 aaKnown RBP11.84□□□□□ -0.51
RBM39-241ENST00000496183 STAC3Q96MF2 364 aa11.84□□□□□ -0.51
RBM39-241ENST00000496183 PPP1R3GB7ZBB8 358 aa11.83□□□□□ -0.52
RBM39-241ENST00000496183 TULP1O00294 542 aaPredicted RBP11.83□□□□□ -0.52
RBM39-241ENST00000496183 POTEEQ6S8J3 1075 aa11.82□□□□□ -0.52
RBM39-241ENST00000496183 C6orf132Q5T0Z8 1188 aa11.81□□□□□ -0.52
RBM39-241ENST00000496183 ADGRD1Q6QNK2 874 aa11.8□□□□□ -0.52
RBM39-241ENST00000496183 CERKQ8TCT0 537 aa11.8□□□□□ -0.52
RBM39-241ENST00000496183 SLC24A1O60721 1099 aa11.79□□□□□ -0.52
RBM39-241ENST00000496183 SLC4A5Q9BY07 1137 aa11.79□□□□□ -0.52
RBM39-241ENST00000496183 DMRTA1Q5VZB9 504 aa11.78□□□□□ -0.52
RBM39-241ENST00000496183 SEMA3EO15041 775 aa11.77□□□□□ -0.53
RBM39-241ENST00000496183 OSBPP22059 807 aa11.76□□□□□ -0.53
RBM39-241ENST00000496183 MLLT3P42568 568 aaPredicted RBP11.75□□□□□ -0.53
RBM39-241ENST00000496183 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
RBM39-241ENST00000496183 ZBED2Q9BTP6 218 aa11.74□□□□□ -0.53
RBM39-241ENST00000496183 VPS9D1Q9Y2B5 631 aa11.74□□□□□ -0.53
RBM39-241ENST00000496183 MYT1LQ9UL68 1186 aa11.73□□□□□ -0.53
RBM39-241ENST00000496183 TESPA1A2RU30 521 aaPredicted RBP11.72□□□□□ -0.53
RBM39-241ENST00000496183 TSR1Q2NL82 804 aaKnown RBP11.72□□□□□ -0.53
RBM39-241ENST00000496183 ONECUT3O60422 494 aaPredicted RBP11.71□□□□□ -0.53
RBM39-241ENST00000496183 COL9A1P20849 921 aa11.7□□□□□ -0.54
RBM39-241ENST00000496183 RABGEF1Q9UJ41 708 aa11.7□□□□□ -0.54
RBM39-241ENST00000496183 GOLGA8CPA6NN73 597 aa11.68□□□□□ -0.54
RBM39-241ENST00000496183 PACS2Q86VP3 889 aa11.68□□□□□ -0.54
RBM39-241ENST00000496183 MRPL50Q8N5N7 158 aaKnown RBP11.68□□□□□ -0.54
RBM39-241ENST00000496183 NUTM2FA1L443 756 aa11.67□□□□□ -0.54
RBM39-241ENST00000496183 TRIM6-TRIM34B2RNG4 842 aa11.67□□□□□ -0.54
RBM39-241ENST00000496183 HRO43593 1189 aa11.67□□□□□ -0.54
RBM39-241ENST00000496183 RNF166Q96A37 237 aaPredicted RBP11.67□□□□□ -0.54
RBM39-241ENST00000496183 RBM27Q9P2N5 1060 aaKnown RBP11.67□□□□□ -0.54
RBM39-241ENST00000496183 PRSS12P56730 875 aa11.65□□□□□ -0.54
RBM39-241ENST00000496183 PROX2Q3B8N5 592 aa11.65□□□□□ -0.54
RBM39-241ENST00000496183 PRIM1P49642 420 aaKnown RBP11.64□□□□□ -0.55
RBM39-241ENST00000496183 CDCA7LQ96GN5 454 aa11.64□□□□□ -0.55
RBM39-241ENST00000496183 CDHR5Q9HBB8 845 aa11.64□□□□□ -0.55
RBM39-241ENST00000496183 NBPF26B4DH59 902 aa11.62□□□□□ -0.55
RBM39-241ENST00000496183 FCHSD2O94868 740 aa11.62□□□□□ -0.55
RBM39-241ENST00000496183 LAPTM4BQ86VI4 370 aa11.62□□□□□ -0.55
RBM39-241ENST00000496183 KIAA1468Q9P260 1216 aa11.62□□□□□ -0.55
RBM39-241ENST00000496183 BHMG1C9JSJ3 638 aaPredicted RBP11.61□□□□□ -0.55
RBM39-241ENST00000496183 PTGDRQ13258 359 aa11.59□□□□□ -0.55
RBM39-241ENST00000496183 RBM26Q5T8P6 1007 aaKnown RBP11.58□□□□□ -0.56
RBM39-241ENST00000496183 GPIHBP1Q8IV16 184 aa11.58□□□□□ -0.56
RBM39-241ENST00000496183 TSKSQ9UJT2 592 aa11.57□□□□□ -0.56
RBM39-241ENST00000496183 HIC1Q14526 733 aa11.56□□□□□ -0.56
RBM39-241ENST00000496183 FAM98CQ17RN3 349 aaKnown RBP11.56□□□□□ -0.56
RBM39-241ENST00000496183 PADI6Q6TGC4 694 aa11.56□□□□□ -0.56
RBM39-241ENST00000496183 ANKK1Q8NFD2 765 aa11.56□□□□□ -0.56
RBM39-241ENST00000496183 NPDC1Q9NQX5 325 aaPredicted RBP11.56□□□□□ -0.56
RBM39-241ENST00000496183 WNT2BQ93097 391 aa11.55□□□□□ -0.56
RBM39-241ENST00000496183 KCTD12Q96CX2 325 aaKnown RBP11.55□□□□□ -0.56
RBM39-241ENST00000496183 HDGFP51858 240 aaKnown RBP11.54□□□□□ -0.56
RBM39-241ENST00000496183 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
RBM39-241ENST00000496183 TATDN2Q93075 761 aa11.53□□□□□ -0.56
RBM39-241ENST00000496183 HCSTQ9UBK5 93 aa11.52□□□□□ -0.57
RBM39-241ENST00000496183 SEPT9Q9UHD8 586 aaPredicted RBP11.52□□□□□ -0.57
RBM39-241ENST00000496183 SLC4A3P48751 1232 aa11.51□□□□□ -0.57
RBM39-241ENST00000496183 ZFRQ96KR1 1074 aaKnown RBP11.51□□□□□ -0.57
RBM39-241ENST00000496183 GNPATO15228 680 aa11.5□□□□□ -0.57
RBM39-241ENST00000496183 TTC13Q8NBP0 860 aa11.5□□□□□ -0.57
RBM39-241ENST00000496183 NUDT18Q6ZVK8 323 aa11.49□□□□□ -0.57
RBM39-241ENST00000496183 RBM46Q8TBY0 533 aaKnown RBP11.49□□□□□ -0.57
RBM39-241ENST00000496183 BCANQ96GW7 911 aa11.49□□□□□ -0.57
RBM39-241ENST00000496183 LRCH3Q96II8 777 aa11.48□□□□□ -0.57
RBM39-241ENST00000496183 LMOD2Q6P5Q4 547 aa11.46□□□□□ -0.57
RBM39-241ENST00000496183 THSD4Q6ZMP0 1018 aa11.46□□□□□ -0.57
RBM39-241ENST00000496183 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.46□□□□□ -0.57
RBM39-241ENST00000496183 NECTIN2Q92692 538 aa11.46□□□□□ -0.57
RBM39-241ENST00000496183 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.46□□□□□ -0.57
RBM39-241ENST00000496183 FAM198AQ9UFP1 575 aa11.46□□□□□ -0.57
RBM39-241ENST00000496183 SMAPO00193 183 aa11.45□□□□□ -0.58
RBM39-241ENST00000496183 OATP04181 439 aa11.45□□□□□ -0.58
RBM39-241ENST00000496183 SOWAHBA6NEL2 793 aa11.43□□□□□ -0.58
RBM39-241ENST00000496183 PTPN5P54829 565 aa11.43□□□□□ -0.58
RBM39-241ENST00000496183 NYAP1Q6ZVC0 841 aa11.42□□□□□ -0.58
RBM39-241ENST00000496183 ADGRG1Q9Y653 693 aa11.42□□□□□ -0.58
RBM39-241ENST00000496183 DNAJB2P25686 324 aa11.41□□□□□ -0.58
RBM39-241ENST00000496183 GPR37O15354 613 aa11.4□□□□□ -0.58
RBM39-241ENST00000496183 RNF40O75150 1001 aa11.39□□□□□ -0.59
RBM39-241ENST00000496183 BCAMP50895 628 aa11.39□□□□□ -0.59
RBM39-241ENST00000496183 SAMD7Q7Z3H4 446 aa11.39□□□□□ -0.59
RBM39-241ENST00000496183 SLF2Q8IX21 1173 aa11.39□□□□□ -0.59
RBM39-241ENST00000496183 EYA1Q99502 592 aa11.39□□□□□ -0.59
RBM39-241ENST00000496183 TSR3Q9UJK0 312 aaKnown RBP11.39□□□□□ -0.59
RBM39-241ENST00000496183 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.38□□□□□ -0.59
RBM39-241ENST00000496183 PPP4CP60510 307 aa11.37□□□□□ -0.59
RBM39-241ENST00000496183 HPS5Q9UPZ3 1129 aa11.37□□□□□ -0.59
RBM39-241ENST00000496183 MAP2K5Q13163 448 aa11.36□□□□□ -0.59
RBM39-241ENST00000496183 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
RBM39-241ENST00000496183 RCCD1A6NED2 376 aa11.34□□□□□ -0.59
RBM39-241ENST00000496183 C3orf80F5H4A9 247 aa11.34□□□□□ -0.59
RBM39-241ENST00000496183 RSPH4AQ5TD94 716 aa11.34□□□□□ -0.59
RBM39-241ENST00000496183 METTL3Q86U44 580 aaKnown RBP11.34□□□□□ -0.59
RBM39-241ENST00000496183 PXYLP1Q8TE99 480 aa11.34□□□□□ -0.59
RBM39-241ENST00000496183 SWT1Q5T5J6 900 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 493.5 ms