RNA–Protein interactions for RNA: ENST00000495794.5

BRD9-213, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 4,865 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-213ENST00000495794 PRXQ9BXM0 1461 aa17.56■□□□□ 0.4
BRD9-213ENST00000495794 UACAQ9BZF9 1416 aa17.56■□□□□ 0.4
BRD9-213ENST00000495794 RRP7AQ9Y3A4 280 aaKnown RBP17.56■□□□□ 0.4
BRD9-213ENST00000495794 LRRC9Q6ZRR7 1453 aa17.55■□□□□ 0.4
BRD9-213ENST00000495794 CHMP4AQ9BY43 222 aa17.55■□□□□ 0.4
BRD9-213ENST00000495794 BICRAQ9NZM4 1560 aa17.55■□□□□ 0.4
BRD9-213ENST00000495794 KIAA1211Q6ZU35 1233 aa17.55■□□□□ 0.4
BRD9-213ENST00000495794 NPHP1O15259 732 aa17.55■□□□□ 0.4
BRD9-213ENST00000495794 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.55■□□□□ 0.4
BRD9-213ENST00000495794 VGFO15240 615 aaPredicted RBP17.54■□□□□ 0.4
BRD9-213ENST00000495794 CUX1P39880 1505 aa17.54■□□□□ 0.4
BRD9-213ENST00000495794 MFAP1P55081 439 aaKnown RBP17.53■□□□□ 0.4
BRD9-213ENST00000495794 LMOD3Q0VAK6 560 aa17.53■□□□□ 0.4
BRD9-213ENST00000495794 GBP4Q96PP9 640 aa17.53■□□□□ 0.4
BRD9-213ENST00000495794 NGDNQ8NEJ9 315 aaKnown RBP17.53■□□□□ 0.4
BRD9-213ENST00000495794 PLIN1O60240 522 aa17.52■□□□□ 0.4
BRD9-213ENST00000495794 EID1Q9Y6B2 187 aa17.52■□□□□ 0.4
BRD9-213ENST00000495794 RRP1P56182 461 aaKnown RBP17.51■□□□□ 0.39
BRD9-213ENST00000495794 EXOC6Q8TAG9 804 aa17.51■□□□□ 0.39
BRD9-213ENST00000495794 HMMRO75330 724 aa17.51■□□□□ 0.39
BRD9-213ENST00000495794 CGNL1Q0VF96 1302 aa17.5■□□□□ 0.39
BRD9-213ENST00000495794 NUTM2FA1L443 756 aa17.5■□□□□ 0.39
BRD9-213ENST00000495794 KIF7Q2M1P5 1343 aa17.5■□□□□ 0.39
BRD9-213ENST00000495794 CCDC7Q96M83 1385 aa17.5■□□□□ 0.39
BRD9-213ENST00000495794 E9PSI1 815 aa17.5■□□□□ 0.39
BRD9-213ENST00000495794 APAF1O14727 1248 aa17.5■□□□□ 0.39
BRD9-213ENST00000495794 CSB-PGBD3P0DP91 1061 aa17.49■□□□□ 0.39
BRD9-213ENST00000495794 BCL2L13Q9BXK5 485 aa17.49■□□□□ 0.39
BRD9-213ENST00000495794 EVC2Q86UK5 1308 aa17.49■□□□□ 0.39
BRD9-213ENST00000495794 CENPQQ7L2Z9 268 aaPredicted RBP17.49■□□□□ 0.39
BRD9-213ENST00000495794 CASKIN1Q8WXD9 1431 aa17.49■□□□□ 0.39
BRD9-213ENST00000495794 SLC4A10Q6U841 1118 aa17.48■□□□□ 0.39
BRD9-213ENST00000495794 AMPHP49418 695 aa17.48■□□□□ 0.39
BRD9-213ENST00000495794 GZF1Q9H116 711 aaPredicted RBP17.48■□□□□ 0.39
BRD9-213ENST00000495794 RRBP1Q9P2E9 1410 aaKnown RBP17.48■□□□□ 0.39
BRD9-213ENST00000495794 NRDCO43847 1150 aa17.47■□□□□ 0.39
BRD9-213ENST00000495794 PDE4AP27815 886 aa17.47■□□□□ 0.39
BRD9-213ENST00000495794 AQRO60306 1485 aaKnown RBP eCLIP17.46■□□□□ 0.385e-7■■■■■ 30.8
BRD9-213ENST00000495794 NCOA2Q15596 1464 aa17.45■□□□□ 0.38
BRD9-213ENST00000495794 ANKRD50Q9ULJ7 1429 aa17.45■□□□□ 0.38
BRD9-213ENST00000495794 GOLGA6L6A8MZA4 724 aa17.45■□□□□ 0.38
BRD9-213ENST00000495794 ELL2O00472 640 aaPredicted RBP17.45■□□□□ 0.38
BRD9-213ENST00000495794 CRBNQ96SW2 442 aa17.45■□□□□ 0.38
BRD9-213ENST00000495794 HDAC5Q9UQL6 1122 aa17.45■□□□□ 0.38
BRD9-213ENST00000495794 MSNP26038 577 aaKnown RBP17.44■□□□□ 0.38
BRD9-213ENST00000495794 PTMSP20962 102 aa17.44■□□□□ 0.38
BRD9-213ENST00000495794 NESP48681 1621 aa17.43■□□□□ 0.38
BRD9-213ENST00000495794 ZKSCAN2Q63HK3 967 aa17.43■□□□□ 0.38
BRD9-213ENST00000495794 NGEFQ8N5V2 710 aa17.43■□□□□ 0.38
BRD9-213ENST00000495794 STAC3Q96MF2 364 aa17.43■□□□□ 0.38
BRD9-213ENST00000495794 MINK1Q8N4C8 1332 aaPredicted RBP17.43■□□□□ 0.38
BRD9-213ENST00000495794 TRIM6-TRIM34B2RNG4 842 aa17.43■□□□□ 0.38
BRD9-213ENST00000495794 LTV1Q96GA3 475 aaPredicted RBP17.43■□□□□ 0.38
BRD9-213ENST00000495794 COG6Q9Y2V7 657 aa17.43■□□□□ 0.38
BRD9-213ENST00000495794 ZNF330Q9Y3S2 320 aaPredicted RBP17.42■□□□□ 0.38
BRD9-213ENST00000495794 FYCO1Q9BQS8 1478 aa17.42■□□□□ 0.38
BRD9-213ENST00000495794 FAM161AQ3B820 660 aa17.42■□□□□ 0.38
BRD9-213ENST00000495794 WASHC2AQ641Q2 1341 aa17.41■□□□□ 0.38
BRD9-213ENST00000495794 CC2D2AQ9P2K1 1620 aa17.41■□□□□ 0.38
BRD9-213ENST00000495794 COG3Q96JB2 828 aa17.41■□□□□ 0.38
BRD9-213ENST00000495794 CNTLNQ9NXG0 1405 aa17.39■□□□□ 0.38
BRD9-213ENST00000495794 TOPBP1Q92547 1522 aa17.39■□□□□ 0.37
BRD9-213ENST00000495794 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
BRD9-213ENST00000495794 PEG3Q9GZU2 1588 aa17.37■□□□□ 0.37
BRD9-213ENST00000495794 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
BRD9-213ENST00000495794 CHAF1AQ13111 956 aaPredicted RBP17.37■□□□□ 0.37
BRD9-213ENST00000495794 GPATCH3Q96I76 525 aa17.37■□□□□ 0.37
BRD9-213ENST00000495794 EFCAB5A4FU69 1503 aa17.36■□□□□ 0.37
BRD9-213ENST00000495794 OSCARQ8IYS5 282 aa17.36■□□□□ 0.37
BRD9-213ENST00000495794 MIA2Q96PC5 1412 aa17.36■□□□□ 0.37
BRD9-213ENST00000495794 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
BRD9-213ENST00000495794 DRC7Q8IY82 874 aa17.35■□□□□ 0.37
BRD9-213ENST00000495794 DIAPH1O60610 1272 aaKnown RBP17.35■□□□□ 0.37
BRD9-213ENST00000495794 ANKRD45Q5TZF3 282 aa17.35■□□□□ 0.37
BRD9-213ENST00000495794 GOLGA6L3A6NEY3 463 aa17.34■□□□□ 0.37
BRD9-213ENST00000495794 GORABQ5T7V8 394 aa17.34■□□□□ 0.37
BRD9-213ENST00000495794 FOXD4L1Q9NU39 408 aa17.34■□□□□ 0.37
BRD9-213ENST00000495794 CHMP3Q9Y3E7 222 aa17.34■□□□□ 0.37
BRD9-213ENST00000495794 SYAP1Q96A49 352 aaPredicted RBP17.34■□□□□ 0.37
BRD9-213ENST00000495794 GNL2Q13823 731 aaKnown RBP17.33■□□□□ 0.37
BRD9-213ENST00000495794 TIAM1Q13009 1591 aa17.33■□□□□ 0.37
BRD9-213ENST00000495794 TULP1O00294 542 aaPredicted RBP17.33■□□□□ 0.37
BRD9-213ENST00000495794 SLC4A3P48751 1232 aa17.33■□□□□ 0.37
BRD9-213ENST00000495794 USP35Q9P2H5 1018 aa17.33■□□□□ 0.37
BRD9-213ENST00000495794 GRIN2BQ13224 1484 aa17.33■□□□□ 0.36
BRD9-213ENST00000495794 ST18O60284 1047 aa17.32■□□□□ 0.36
BRD9-213ENST00000495794 FANCIQ9NVI1 1328 aa17.32■□□□□ 0.36
BRD9-213ENST00000495794 RIPK4P57078 832 aa17.31■□□□□ 0.36
BRD9-213ENST00000495794 RUNDC1Q96C34 613 aa17.31■□□□□ 0.36
BRD9-213ENST00000495794 DDX19BQ9UMR2 479 aa17.31■□□□□ 0.36
BRD9-213ENST00000495794 HTATSF1O43719 755 aaKnown RBP17.31■□□□□ 0.36
BRD9-213ENST00000495794 AFAP1Q8N556 730 aa17.31■□□□□ 0.36
BRD9-213ENST00000495794 NOL8Q76FK4 1167 aaKnown RBP17.31■□□□□ 0.36
BRD9-213ENST00000495794 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
BRD9-213ENST00000495794 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
BRD9-213ENST00000495794 DZIP1LQ8IYY4 767 aaKnown RBP17.3■□□□□ 0.36
BRD9-213ENST00000495794 BRD4O60885 1362 aaPredicted RBP17.29■□□□□ 0.36
BRD9-213ENST00000495794 TAF7LQ5H9L4 462 aa17.29■□□□□ 0.36
BRD9-213ENST00000495794 KIAA2012Q0VF49 1180 aa17.29■□□□□ 0.36
BRD9-213ENST00000495794 ADAMTS8Q9UP79 889 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms