RNA–Protein interactions for RNA: ENST00000494509.1

AC055758.1-201, humanhuman

TSL 3 BASIC

Gene AC055758.1, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055758.1-201ENST00000494509 THSD4Q6ZMP0 1018 aa11.42□□□□□ -0.58
AC055758.1-201ENST00000494509 COL9A1P20849 921 aa11.4□□□□□ -0.58
AC055758.1-201ENST00000494509 PROX2Q3B8N5 592 aa11.39□□□□□ -0.59
AC055758.1-201ENST00000494509 MRPL50Q8N5N7 158 aaKnown RBP11.38□□□□□ -0.59
AC055758.1-201ENST00000494509 WNT2BQ93097 391 aa11.38□□□□□ -0.59
AC055758.1-201ENST00000494509 PPP1R3GB7ZBB8 358 aa11.36□□□□□ -0.59
AC055758.1-201ENST00000494509 CAMK2BQ13554 666 aa11.35□□□□□ -0.59
AC055758.1-201ENST00000494509 GOLGA8CPA6NN73 597 aa11.33□□□□□ -0.6
AC055758.1-201ENST00000494509 DPYSL4O14531 572 aa11.32□□□□□ -0.6
AC055758.1-201ENST00000494509 PHF14O94880 888 aa11.32□□□□□ -0.6
AC055758.1-201ENST00000494509 TYW1BQ6NUM6 668 aa11.32□□□□□ -0.6
AC055758.1-201ENST00000494509 CUX2O14529 1486 aa11.32□□□□□ -0.6
AC055758.1-201ENST00000494509 NBPF3Q9H094 633 aa11.31□□□□□ -0.6
AC055758.1-201ENST00000494509 RABGEF1Q9UJ41 708 aa11.3□□□□□ -0.6
AC055758.1-201ENST00000494509 FBXW7Q969H0 707 aa11.28□□□□□ -0.6
AC055758.1-201ENST00000494509 DCAF1Q9Y4B6 1507 aa11.28□□□□□ -0.6
AC055758.1-201ENST00000494509 ZCCHC6Q5VYS8 1495 aaKnown RBP11.27□□□□□ -0.6
AC055758.1-201ENST00000494509 IFFO2Q5TF58 517 aa11.27□□□□□ -0.61
AC055758.1-201ENST00000494509 BCAMP50895 628 aa11.26□□□□□ -0.61
AC055758.1-201ENST00000494509 C6orf132Q5T0Z8 1188 aa11.26□□□□□ -0.61
AC055758.1-201ENST00000494509 KIAA1468Q9P260 1216 aa11.25□□□□□ -0.61
AC055758.1-201ENST00000494509 A0A0G2JS52 829 aa11.24□□□□□ -0.61
AC055758.1-201ENST00000494509 RBM33Q96EV2 1170 aaKnown RBP11.24□□□□□ -0.61
AC055758.1-201ENST00000494509 DDX12PQ92771 950 aa11.23□□□□□ -0.61
AC055758.1-201ENST00000494509 ERCC6Q03468 1493 aa11.23□□□□□ -0.61
AC055758.1-201ENST00000494509 EPAS1Q99814 870 aa11.22□□□□□ -0.61
AC055758.1-201ENST00000494509 SEPT9Q9UHD8 586 aaPredicted RBP11.22□□□□□ -0.61
AC055758.1-201ENST00000494509 ANKK1Q8NFD2 765 aa11.21□□□□□ -0.61
AC055758.1-201ENST00000494509 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.61
AC055758.1-201ENST00000494509 ZFRQ96KR1 1074 aaKnown RBP11.2□□□□□ -0.62
AC055758.1-201ENST00000494509 SOWAHBA6NEL2 793 aa11.19□□□□□ -0.62
AC055758.1-201ENST00000494509 TRIM6-TRIM34B2RNG4 842 aa11.19□□□□□ -0.62
AC055758.1-201ENST00000494509 TSR1Q2NL82 804 aaKnown RBP11.18□□□□□ -0.62
AC055758.1-201ENST00000494509 LAPTM4BQ86VI4 370 aa11.18□□□□□ -0.62
AC055758.1-201ENST00000494509 ONECUT3O60422 494 aaPredicted RBP11.17□□□□□ -0.62
AC055758.1-201ENST00000494509 ITGBL1O95965 494 aaPredicted RBP11.16□□□□□ -0.62
AC055758.1-201ENST00000494509 PRIM1P49642 420 aaKnown RBP11.16□□□□□ -0.62
AC055758.1-201ENST00000494509 WBP1LQ9NX94 342 aa11.16□□□□□ -0.62
AC055758.1-201ENST00000494509 EN1Q05925 392 aaPredicted RBP11.15□□□□□ -0.62
AC055758.1-201ENST00000494509 NBR1Q14596 966 aa11.15□□□□□ -0.62
AC055758.1-201ENST00000494509 PDIA6Q15084 440 aa11.15□□□□□ -0.62
AC055758.1-201ENST00000494509 TSKSQ9UJT2 592 aa11.15□□□□□ -0.62
AC055758.1-201ENST00000494509 RGS20O76081 388 aa11.13□□□□□ -0.63
AC055758.1-201ENST00000494509 FAM98CQ17RN3 349 aaKnown RBP11.11□□□□□ -0.63
AC055758.1-201ENST00000494509 C3orf80F5H4A9 247 aa11.1□□□□□ -0.63
AC055758.1-201ENST00000494509 MAP3K7O43318 606 aa11.1□□□□□ -0.63
AC055758.1-201ENST00000494509 FAM198AQ9UFP1 575 aa11.1□□□□□ -0.63
AC055758.1-201ENST00000494509 SPRYD3Q8NCJ5 442 aa11.08□□□□□ -0.64
AC055758.1-201ENST00000494509 IRX2Q9BZI1 471 aaPredicted RBP11.08□□□□□ -0.64
AC055758.1-201ENST00000494509 HPS5Q9UPZ3 1129 aa11.08□□□□□ -0.64
AC055758.1-201ENST00000494509 SMAPO00193 183 aa11.07□□□□□ -0.64
AC055758.1-201ENST00000494509 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.07□□□□□ -0.64
AC055758.1-201ENST00000494509 NYAP1Q6ZVC0 841 aa11.05□□□□□ -0.64
AC055758.1-201ENST00000494509 LRCH3Q96II8 777 aa11.05□□□□□ -0.64
AC055758.1-201ENST00000494509 TSR3Q9UJK0 312 aaKnown RBP11.05□□□□□ -0.64
AC055758.1-201ENST00000494509 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
AC055758.1-201ENST00000494509 E2F4Q16254 413 aa11.04□□□□□ -0.64
AC055758.1-201ENST00000494509 CDCA7LQ96GN5 454 aa11.04□□□□□ -0.64
AC055758.1-201ENST00000494509 CDHR5Q9HBB8 845 aa11.04□□□□□ -0.64
AC055758.1-201ENST00000494509 GRXCR2A6NFK2 248 aa11.03□□□□□ -0.64
AC055758.1-201ENST00000494509 KCNC4Q03721 635 aa11.02□□□□□ -0.65
AC055758.1-201ENST00000494509 PACS2Q86VP3 889 aa11.02□□□□□ -0.65
AC055758.1-201ENST00000494509 PRSS12P56730 875 aa11.01□□□□□ -0.65
AC055758.1-201ENST00000494509 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
AC055758.1-201ENST00000494509 CFAP44Q96MT7 982 aa11.01□□□□□ -0.65
AC055758.1-201ENST00000494509 ARIH1Q9Y4X5 557 aaPredicted RBP11.01□□□□□ -0.65
AC055758.1-201ENST00000494509 THOC2Q8NI27 1593 aaKnown RBP11.01□□□□□ -0.65
AC055758.1-201ENST00000494509 SAMD7Q7Z3H4 446 aa11□□□□□ -0.65
AC055758.1-201ENST00000494509 NESP48681 1621 aa10.99□□□□□ -0.65
AC055758.1-201ENST00000494509 OSBPP22059 807 aa10.99□□□□□ -0.65
AC055758.1-201ENST00000494509 RTN4Q9NQC3 1192 aaKnown RBP10.99□□□□□ -0.65
AC055758.1-201ENST00000494509 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.99□□□□□ -0.65
AC055758.1-201ENST00000494509 NCAPD3P42695 1498 aa10.97□□□□□ -0.65
AC055758.1-201ENST00000494509 TATDN2Q93075 761 aa10.96□□□□□ -0.65
AC055758.1-201ENST00000494509 PNMA3Q9UL41 463 aa10.96□□□□□ -0.65
AC055758.1-201ENST00000494509 PPP4CP60510 307 aa10.95□□□□□ -0.66
AC055758.1-201ENST00000494509 TJAP1Q5JTD0 557 aa10.94□□□□□ -0.66
AC055758.1-201ENST00000494509 KIF21AQ7Z4S6 1674 aa10.94□□□□□ -0.66
AC055758.1-201ENST00000494509 SMARCA2P51531 1590 aa10.94□□□□□ -0.66
AC055758.1-201ENST00000494509 AMER1Q5JTC6 1135 aaPredicted RBP10.92□□□□□ -0.66
AC055758.1-201ENST00000494509 NUDT18Q6ZVK8 323 aa10.92□□□□□ -0.66
AC055758.1-201ENST00000494509 CERKQ8TCT0 537 aa10.92□□□□□ -0.66
AC055758.1-201ENST00000494509 WDR70Q9NW82 654 aa10.92□□□□□ -0.66
AC055758.1-201ENST00000494509 NBPF26B4DH59 902 aa10.91□□□□□ -0.66
AC055758.1-201ENST00000494509 NPDC1Q9NQX5 325 aaPredicted RBP10.91□□□□□ -0.66
AC055758.1-201ENST00000494509 HMGXB3Q12766 1538 aa10.9□□□□□ -0.66
AC055758.1-201ENST00000494509 ATAD2BQ9ULI0 1458 aa10.9□□□□□ -0.66
AC055758.1-201ENST00000494509 TTC13Q8NBP0 860 aa10.89□□□□□ -0.67
AC055758.1-201ENST00000494509 MTRQ99707 1265 aa10.89□□□□□ -0.67
AC055758.1-201ENST00000494509 LCE2BO14633 110 aa10.88□□□□□ -0.67
AC055758.1-201ENST00000494509 PADI6Q6TGC4 694 aa10.88□□□□□ -0.67
AC055758.1-201ENST00000494509 APLP1P51693 650 aa10.87□□□□□ -0.67
AC055758.1-201ENST00000494509 ZNF516Q92618 1163 aa10.87□□□□□ -0.67
AC055758.1-201ENST00000494509 LAMC3Q9Y6N6 1575 aa10.86□□□□□ -0.67
AC055758.1-201ENST00000494509 Q6ZNB5 142 aa10.86□□□□□ -0.67
AC055758.1-201ENST00000494509 RBM27Q9P2N5 1060 aaKnown RBP10.86□□□□□ -0.67
AC055758.1-201ENST00000494509 RNF40O75150 1001 aa10.85□□□□□ -0.67
AC055758.1-201ENST00000494509 SMARCA4P51532 1647 aa10.84□□□□□ -0.67
AC055758.1-201ENST00000494509 SWT1Q5T5J6 900 aaKnown RBP10.84□□□□□ -0.67
AC055758.1-201ENST00000494509 IL21Q9HBE4 155 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms