RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 DAXXQ9UER7 740 aaPredicted RBP8.03□□□□□ -1.12
CMSS1-207ENST00000494412 GRXCR2A6NFK2 248 aa8.02□□□□□ -1.13
CMSS1-207ENST00000494412 PTGER2P43116 358 aa8.01□□□□□ -1.13
CMSS1-207ENST00000494412 FOSBP53539 338 aa8.01□□□□□ -1.13
CMSS1-207ENST00000494412 PCDHGA10Q9Y5H3 936 aa8.01□□□□□ -1.13
CMSS1-207ENST00000494412 PRIM1P49642 420 aaKnown RBP8□□□□□ -1.13
CMSS1-207ENST00000494412 IL27Q8NEV9 243 aa7.99□□□□□ -1.13
CMSS1-207ENST00000494412 JPH4Q96JJ6 628 aa7.99□□□□□ -1.13
CMSS1-207ENST00000494412 PHF14O94880 888 aa7.98□□□□□ -1.13
CMSS1-207ENST00000494412 POTEEQ6S8J3 1075 aa7.98□□□□□ -1.13
CMSS1-207ENST00000494412 KDM4CQ9H3R0 1056 aa7.98□□□□□ -1.13
CMSS1-207ENST00000494412 PPP4R3BQ5MIZ7 849 aa7.97□□□□□ -1.13
CMSS1-207ENST00000494412 RBM33Q96EV2 1170 aaKnown RBP7.97□□□□□ -1.13
CMSS1-207ENST00000494412 ADAM33Q9BZ11 813 aa7.97□□□□□ -1.13
CMSS1-207ENST00000494412 AXIN2Q9Y2T1 843 aa7.97□□□□□ -1.13
CMSS1-207ENST00000494412 TRIM66O15016 1216 aa7.96□□□□□ -1.14
CMSS1-207ENST00000494412 OSBPP22059 807 aa7.96□□□□□ -1.14
CMSS1-207ENST00000494412 TYW1BQ6NUM6 668 aa7.96□□□□□ -1.14
CMSS1-207ENST00000494412 ZNF687Q8N1G0 1237 aa7.96□□□□□ -1.14
CMSS1-207ENST00000494412 ZDHHC16Q969W1 377 aa7.96□□□□□ -1.14
CMSS1-207ENST00000494412 PSDA5PKW4 1024 aaPredicted RBP7.95□□□□□ -1.14
CMSS1-207ENST00000494412 PDE4DQ08499 809 aa7.95□□□□□ -1.14
CMSS1-207ENST00000494412 CDAN1Q8IWY9 1227 aa7.94□□□□□ -1.14
CMSS1-207ENST00000494412 EPAS1Q99814 870 aa7.94□□□□□ -1.14
CMSS1-207ENST00000494412 PSEN2P49810 448 aa7.93□□□□□ -1.14
CMSS1-207ENST00000494412 TSR1Q2NL82 804 aaKnown RBP7.93□□□□□ -1.14
CMSS1-207ENST00000494412 MAP3K7O43318 606 aa7.92□□□□□ -1.14
CMSS1-207ENST00000494412 EN1Q05925 392 aaPredicted RBP7.92□□□□□ -1.14
CMSS1-207ENST00000494412 FBXW7Q969H0 707 aa7.92□□□□□ -1.14
CMSS1-207ENST00000494412 KCNK17Q96T54 332 aa7.92□□□□□ -1.14
CMSS1-207ENST00000494412 BCL2L12Q9HB09 334 aa7.92□□□□□ -1.14
CMSS1-207ENST00000494412 C6orf132Q5T0Z8 1188 aa7.91□□□□□ -1.14
CMSS1-207ENST00000494412 KRTAP3-3Q9BYR6 98 aa7.91□□□□□ -1.14
CMSS1-207ENST00000494412 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
CMSS1-207ENST00000494412 DMRTA1Q5VZB9 504 aa7.9□□□□□ -1.14
CMSS1-207ENST00000494412 CDHR5Q9HBB8 845 aa7.9□□□□□ -1.14
CMSS1-207ENST00000494412 ARHGAP33O14559 1287 aa7.89□□□□□ -1.15
CMSS1-207ENST00000494412 GPR37O15354 613 aa7.89□□□□□ -1.15
CMSS1-207ENST00000494412 COL9A1P20849 921 aa7.89□□□□□ -1.15
CMSS1-207ENST00000494412 PTPREP23469 700 aa7.89□□□□□ -1.15
CMSS1-207ENST00000494412 ZMYND15Q9H091 742 aa7.89□□□□□ -1.15
CMSS1-207ENST00000494412 NUTM2FA1L443 756 aa7.88□□□□□ -1.15
CMSS1-207ENST00000494412 FAM117AQ9C073 453 aa7.87□□□□□ -1.15
CMSS1-207ENST00000494412 MINK1Q8N4C8 1332 aaPredicted RBP7.86□□□□□ -1.15
CMSS1-207ENST00000494412 PBX2P40425 430 aa7.86□□□□□ -1.15
CMSS1-207ENST00000494412 ANKRD13DQ6ZTN6 518 aa7.86□□□□□ -1.15
CMSS1-207ENST00000494412 RSPH6AQ9H0K4 717 aa7.86□□□□□ -1.15
CMSS1-207ENST00000494412 LSM11P83369 360 aaKnown RBP eCLIP7.85□□□□□ -1.15
CMSS1-207ENST00000494412 CCDC102AQ96A19 550 aa7.85□□□□□ -1.15
CMSS1-207ENST00000494412 NPDC1Q9NQX5 325 aaPredicted RBP7.85□□□□□ -1.15
CMSS1-207ENST00000494412 PPP1R3GB7ZBB8 358 aa7.84□□□□□ -1.15
CMSS1-207ENST00000494412 MAP2K5Q13163 448 aa7.84□□□□□ -1.15
CMSS1-207ENST00000494412 PROX2Q3B8N5 592 aa7.84□□□□□ -1.15
CMSS1-207ENST00000494412 DDRGK1Q96HY6 314 aa7.83□□□□□ -1.16
CMSS1-207ENST00000494412 KCNH8Q96L42 1107 aa7.83□□□□□ -1.16
CMSS1-207ENST00000494412 ZBED2Q9BTP6 218 aa7.83□□□□□ -1.16
CMSS1-207ENST00000494412 PCDH10Q9P2E7 1040 aa7.83□□□□□ -1.16
CMSS1-207ENST00000494412 PLEKHG3A1L390 1219 aa7.81□□□□□ -1.16
CMSS1-207ENST00000494412 IRF6O14896 467 aa7.81□□□□□ -1.16
CMSS1-207ENST00000494412 UBTFP17480 764 aaKnown RBP7.81□□□□□ -1.16
CMSS1-207ENST00000494412 PTGDRQ13258 359 aa7.81□□□□□ -1.16
CMSS1-207ENST00000494412 GNPATO15228 680 aa7.8□□□□□ -1.16
CMSS1-207ENST00000494412 AMHR2Q16671 573 aa7.8□□□□□ -1.16
CMSS1-207ENST00000494412 ADGRD1Q6QNK2 874 aa7.8□□□□□ -1.16
CMSS1-207ENST00000494412 PARP9Q8IXQ6 854 aa7.8□□□□□ -1.16
CMSS1-207ENST00000494412 FAM198AQ9UFP1 575 aa7.8□□□□□ -1.16
CMSS1-207ENST00000494412 VPS9D1Q9Y2B5 631 aa7.8□□□□□ -1.16
CMSS1-207ENST00000494412 FCHSD2O94868 740 aa7.79□□□□□ -1.16
CMSS1-207ENST00000494412 CDCA7LQ96GN5 454 aa7.79□□□□□ -1.16
CMSS1-207ENST00000494412 ARID3AQ99856 593 aa7.79□□□□□ -1.16
CMSS1-207ENST00000494412 TSKSQ9UJT2 592 aa7.79□□□□□ -1.16
CMSS1-207ENST00000494412 FECHP22830 423 aa7.78□□□□□ -1.16
CMSS1-207ENST00000494412 PRSS12P56730 875 aa7.78□□□□□ -1.16
CMSS1-207ENST00000494412 TTLL12Q14166 644 aaPredicted RBP7.78□□□□□ -1.16
CMSS1-207ENST00000494412 HIC1Q14526 733 aa7.78□□□□□ -1.16
CMSS1-207ENST00000494412 PADI6Q6TGC4 694 aa7.78□□□□□ -1.16
CMSS1-207ENST00000494412 TRIM6-TRIM34B2RNG4 842 aa7.77□□□□□ -1.17
CMSS1-207ENST00000494412 C3orf80F5H4A9 247 aa7.77□□□□□ -1.17
CMSS1-207ENST00000494412 SLC4A5Q9BY07 1137 aa7.77□□□□□ -1.17
CMSS1-207ENST00000494412 KIAA1468Q9P260 1216 aa7.77□□□□□ -1.17
CMSS1-207ENST00000494412 TK2O00142 265 aa7.76□□□□□ -1.17
CMSS1-207ENST00000494412 HRO43593 1189 aa7.76□□□□□ -1.17
CMSS1-207ENST00000494412 CERKQ8TCT0 537 aa7.76□□□□□ -1.17
CMSS1-207ENST00000494412 SMAPO00193 183 aa7.75□□□□□ -1.17
CMSS1-207ENST00000494412 FAM161AQ3B820 660 aa7.75□□□□□ -1.17
CMSS1-207ENST00000494412 TTC13Q8NBP0 860 aa7.75□□□□□ -1.17
CMSS1-207ENST00000494412 FLIIQ13045 1269 aa7.74□□□□□ -1.17
CMSS1-207ENST00000494412 SPNS2Q8IVW8 549 aa7.74□□□□□ -1.17
CMSS1-207ENST00000494412 PODXL2Q9NZ53 605 aa7.74□□□□□ -1.17
CMSS1-207ENST00000494412 SEPT9Q9UHD8 586 aaPredicted RBP7.74□□□□□ -1.17
CMSS1-207ENST00000494412 RABGEF1Q9UJ41 708 aa7.74□□□□□ -1.17
CMSS1-207ENST00000494412 BHMG1C9JSJ3 638 aaPredicted RBP7.73□□□□□ -1.17
CMSS1-207ENST00000494412 ARID3CA6NKF2 412 aa7.72□□□□□ -1.17
CMSS1-207ENST00000494412 GIGYF2Q6Y7W6 1299 aaKnown RBP7.72□□□□□ -1.17
CMSS1-207ENST00000494412 C1orf115Q9H7X2 142 aa7.72□□□□□ -1.17
CMSS1-207ENST00000494412 RBM27Q9P2N5 1060 aaKnown RBP7.72□□□□□ -1.17
CMSS1-207ENST00000494412 ONECUT3O60422 494 aaPredicted RBP7.71□□□□□ -1.18
CMSS1-207ENST00000494412 NUDT18Q6ZVK8 323 aa7.71□□□□□ -1.18
CMSS1-207ENST00000494412 PACS2Q86VP3 889 aa7.71□□□□□ -1.18
CMSS1-207ENST00000494412 PNMA3Q9UL41 463 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms