RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MAP2K5Q13163 448 aa8.38□□□□□ -1.07
CLK1-213ENST00000492793 PTGDRQ13258 359 aa8.38□□□□□ -1.07
CLK1-213ENST00000492793 LHX6Q9UPM6 363 aa8.38□□□□□ -1.07
CLK1-213ENST00000492793 CCDC102AQ96A19 550 aa8.37□□□□□ -1.07
CLK1-213ENST00000492793 KDM4FA0A1W2PPD8 638 aa8.36□□□□□ -1.07
CLK1-213ENST00000492793 IRF6O14896 467 aa8.36□□□□□ -1.07
CLK1-213ENST00000492793 TRIM66O15016 1216 aa8.36□□□□□ -1.07
CLK1-213ENST00000492793 PPP4R3BQ5MIZ7 849 aa8.35□□□□□ -1.07
CLK1-213ENST00000492793 C6orf132Q5T0Z8 1188 aa8.35□□□□□ -1.07
CLK1-213ENST00000492793 LCE2DQ5TA82 110 aaPredicted RBP8.35□□□□□ -1.07
CLK1-213ENST00000492793 POTEGQ6S5H5 508 aa8.35□□□□□ -1.07
CLK1-213ENST00000492793 GPBP1L1Q9HC44 474 aaPredicted RBP8.35□□□□□ -1.07
CLK1-213ENST00000492793 PDE4DQ08499 809 aa8.34□□□□□ -1.07
CLK1-213ENST00000492793 TMEM132AQ24JP5 1023 aa8.34□□□□□ -1.07
CLK1-213ENST00000492793 ADAM33Q9BZ11 813 aa8.34□□□□□ -1.07
CLK1-213ENST00000492793 PSDA5PKW4 1024 aaPredicted RBP8.32□□□□□ -1.08
CLK1-213ENST00000492793 TTLL12Q14166 644 aaPredicted RBP8.32□□□□□ -1.08
CLK1-213ENST00000492793 NPDC1Q9NQX5 325 aaPredicted RBP8.32□□□□□ -1.08
CLK1-213ENST00000492793 HOXB1P14653 301 aaPredicted RBP8.31□□□□□ -1.08
CLK1-213ENST00000492793 CERKQ8TCT0 537 aa8.31□□□□□ -1.08
CLK1-213ENST00000492793 KDM4CQ9H3R0 1056 aa8.3□□□□□ -1.08
CLK1-213ENST00000492793 PADI6Q6TGC4 694 aa8.29□□□□□ -1.08
CLK1-213ENST00000492793 PCDH10Q9P2E7 1040 aa8.29□□□□□ -1.08
CLK1-213ENST00000492793 PTPREP23469 700 aa8.28□□□□□ -1.08
CLK1-213ENST00000492793 FAM161AQ3B820 660 aa8.28□□□□□ -1.08
CLK1-213ENST00000492793 IL27Q8NEV9 243 aa8.28□□□□□ -1.08
CLK1-213ENST00000492793 KCNH8Q96L42 1107 aa8.28□□□□□ -1.08
CLK1-213ENST00000492793 ERBB3P21860 1342 aa8.27□□□□□ -1.09
CLK1-213ENST00000492793 BCL2L12Q9HB09 334 aa8.26□□□□□ -1.09
CLK1-213ENST00000492793 PRSS12P56730 875 aa8.25□□□□□ -1.09
CLK1-213ENST00000492793 AMHR2Q16671 573 aa8.25□□□□□ -1.09
CLK1-213ENST00000492793 CDCA7LQ96GN5 454 aa8.25□□□□□ -1.09
CLK1-213ENST00000492793 KCNK17Q96T54 332 aa8.25□□□□□ -1.09
CLK1-213ENST00000492793 GTF3C3Q9Y5Q9 886 aa8.25□□□□□ -1.09
CLK1-213ENST00000492793 OATP04181 439 aa8.24□□□□□ -1.09
CLK1-213ENST00000492793 COL9A1P20849 921 aa8.24□□□□□ -1.09
CLK1-213ENST00000492793 PARP9Q8IXQ6 854 aa8.24□□□□□ -1.09
CLK1-213ENST00000492793 PPP1R3GB7ZBB8 358 aa8.23□□□□□ -1.09
CLK1-213ENST00000492793 EMP3P54852 163 aa8.23□□□□□ -1.09
CLK1-213ENST00000492793 MDM2Q00987 491 aaPredicted RBP8.23□□□□□ -1.09
CLK1-213ENST00000492793 VARS2Q5ST30 1063 aaKnown RBP8.23□□□□□ -1.09
CLK1-213ENST00000492793 FAM163AQ96GL9 167 aaPredicted RBP8.23□□□□□ -1.09
CLK1-213ENST00000492793 DAXXQ9UER7 740 aaPredicted RBP8.23□□□□□ -1.09
CLK1-213ENST00000492793 ST18O60284 1047 aa8.22□□□□□ -1.09
CLK1-213ENST00000492793 NLRP7Q8WX94 980 aa8.22□□□□□ -1.09
CLK1-213ENST00000492793 MARVELD3Q96A59 401 aa8.22□□□□□ -1.09
CLK1-213ENST00000492793 RBM27Q9P2N5 1060 aaKnown RBP8.22□□□□□ -1.09
CLK1-213ENST00000492793 CLCN1P35523 988 aa8.21□□□□□ -1.1
CLK1-213ENST00000492793 GIGYF2Q6Y7W6 1299 aaKnown RBP8.21□□□□□ -1.1
CLK1-213ENST00000492793 METTL3Q86U44 580 aaKnown RBP8.21□□□□□ -1.1
CLK1-213ENST00000492793 RBM46Q8TBY0 533 aaKnown RBP8.21□□□□□ -1.1
CLK1-213ENST00000492793 FAM117AQ9C073 453 aa8.21□□□□□ -1.1
CLK1-213ENST00000492793 ADGRG1Q9Y653 693 aa8.21□□□□□ -1.1
CLK1-213ENST00000492793 FAM205CA6NFA0 338 aa8.19□□□□□ -1.1
CLK1-213ENST00000492793 PACS2Q86VP3 889 aa8.19□□□□□ -1.1
CLK1-213ENST00000492793 DDRGK1Q96HY6 314 aa8.19□□□□□ -1.1
CLK1-213ENST00000492793 PHOX2BQ99453 314 aa8.19□□□□□ -1.1
CLK1-213ENST00000492793 GPCPD1Q9NPB8 672 aa8.19□□□□□ -1.1
CLK1-213ENST00000492793 TSKSQ9UJT2 592 aa8.19□□□□□ -1.1
CLK1-213ENST00000492793 PNMA3Q9UL41 463 aa8.19□□□□□ -1.1
CLK1-213ENST00000492793 TRIM6-TRIM34B2RNG4 842 aa8.18□□□□□ -1.1
CLK1-213ENST00000492793 NBPF26B4DH59 902 aa8.18□□□□□ -1.1
CLK1-213ENST00000492793 PSEN2P49810 448 aa8.18□□□□□ -1.1
CLK1-213ENST00000492793 PROX2Q3B8N5 592 aa8.18□□□□□ -1.1
CLK1-213ENST00000492793 NUDT18Q6ZVK8 323 aa8.18□□□□□ -1.1
CLK1-213ENST00000492793 PXYLP1Q8TE99 480 aa8.18□□□□□ -1.1
CLK1-213ENST00000492793 ATP1B4Q9UN42 357 aaPredicted RBP8.18□□□□□ -1.1
CLK1-213ENST00000492793 REPIN1Q9BWE0 567 aaKnown RBP8.17□□□□□ -1.1
CLK1-213ENST00000492793 FAM198AQ9UFP1 575 aa8.17□□□□□ -1.1
CLK1-213ENST00000492793 AXIN2Q9Y2T1 843 aa8.17□□□□□ -1.1
CLK1-213ENST00000492793 SMAPO00193 183 aa8.16□□□□□ -1.1
CLK1-213ENST00000492793 MS4A1P11836 297 aa8.16□□□□□ -1.1
CLK1-213ENST00000492793 SSTR3P32745 418 aaPredicted RBP8.16□□□□□ -1.1
CLK1-213ENST00000492793 TTC13Q8NBP0 860 aa8.16□□□□□ -1.1
CLK1-213ENST00000492793 TATDN2Q93075 761 aa8.16□□□□□ -1.1
CLK1-213ENST00000492793 ARHGAP33O14559 1287 aa8.15□□□□□ -1.1
CLK1-213ENST00000492793 RCCD1A6NED2 376 aa8.14□□□□□ -1.11
CLK1-213ENST00000492793 KIAA1468Q9P260 1216 aa8.14□□□□□ -1.11
CLK1-213ENST00000492793 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.13□□□□□ -1.11
CLK1-213ENST00000492793 DNAJB2P25686 324 aa8.12□□□□□ -1.11
CLK1-213ENST00000492793 ZBED2Q9BTP6 218 aa8.12□□□□□ -1.11
CLK1-213ENST00000492793 BEGAINQ9BUH8 593 aa8.12□□□□□ -1.11
CLK1-213ENST00000492793 PLEKHG3A1L390 1219 aa8.11□□□□□ -1.11
CLK1-213ENST00000492793 C3orf80F5H4A9 247 aa8.11□□□□□ -1.11
CLK1-213ENST00000492793 DMRTA1Q5VZB9 504 aa8.11□□□□□ -1.11
CLK1-213ENST00000492793 HS3ST6Q96QI5 342 aa8.11□□□□□ -1.11
CLK1-213ENST00000492793 EYA1Q99502 592 aa8.11□□□□□ -1.11
CLK1-213ENST00000492793 FAM217BQ9NTX9 383 aaPredicted RBP8.11□□□□□ -1.11
CLK1-213ENST00000492793 DDX11L8A8MPP1 907 aa8.1□□□□□ -1.11
CLK1-213ENST00000492793 PBX2P40425 430 aa8.1□□□□□ -1.11
CLK1-213ENST00000492793 ZNF687Q8N1G0 1237 aa8.1□□□□□ -1.11
CLK1-213ENST00000492793 TMUB1Q9BVT8 246 aa8.1□□□□□ -1.11
CLK1-213ENST00000492793 SEPT9Q9UHD8 586 aaPredicted RBP8.1□□□□□ -1.11
CLK1-213ENST00000492793 ONECUT3O60422 494 aaPredicted RBP8.09□□□□□ -1.11
CLK1-213ENST00000492793 HDGFP51858 240 aaKnown RBP8.09□□□□□ -1.11
CLK1-213ENST00000492793 POTEEQ6S8J3 1075 aa8.09□□□□□ -1.11
CLK1-213ENST00000492793 C14orf37Q86TY3 774 aa8.08□□□□□ -1.12
CLK1-213ENST00000492793 SULF1Q8IWU6 871 aa8.08□□□□□ -1.12
CLK1-213ENST00000492793 RDH13Q8NBN7 331 aa8.08□□□□□ -1.12
CLK1-213ENST00000492793 PCMTD1Q96MG8 357 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms