RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 BAZ1AQ9NRL2 1556 aaPredicted RBP9.53□□□□□ -0.88
SSX2IP-208ENST00000490476 MINK1Q8N4C8 1332 aaPredicted RBP9.53□□□□□ -0.88
SSX2IP-208ENST00000490476 FCHSD2O94868 740 aa9.52□□□□□ -0.89
SSX2IP-208ENST00000490476 CCDC102AQ96A19 550 aa9.52□□□□□ -0.89
SSX2IP-208ENST00000490476 GNPATO15228 680 aa9.51□□□□□ -0.89
SSX2IP-208ENST00000490476 FECHP22830 423 aa9.51□□□□□ -0.89
SSX2IP-208ENST00000490476 PRIM1P49642 420 aaKnown RBP9.51□□□□□ -0.89
SSX2IP-208ENST00000490476 MAP2K5Q13163 448 aa9.51□□□□□ -0.89
SSX2IP-208ENST00000490476 IRF6O14896 467 aa9.5□□□□□ -0.89
SSX2IP-208ENST00000490476 HOXB3P14651 431 aaPredicted RBP9.49□□□□□ -0.89
SSX2IP-208ENST00000490476 HIC1Q14526 733 aa9.49□□□□□ -0.89
SSX2IP-208ENST00000490476 PTCD2Q8WV60 388 aaKnown RBP9.49□□□□□ -0.89
SSX2IP-208ENST00000490476 DOK7Q18PE1 504 aa9.48□□□□□ -0.89
SSX2IP-208ENST00000490476 MARVELD3Q96A59 401 aa9.48□□□□□ -0.89
SSX2IP-208ENST00000490476 EMP3P54852 163 aa9.47□□□□□ -0.89
SSX2IP-208ENST00000490476 RBM33Q96EV2 1170 aaKnown RBP9.47□□□□□ -0.89
SSX2IP-208ENST00000490476 DAXXQ9UER7 740 aaPredicted RBP9.47□□□□□ -0.89
SSX2IP-208ENST00000490476 FAM117AQ9C073 453 aa9.46□□□□□ -0.9
SSX2IP-208ENST00000490476 MAP3K7O43318 606 aa9.45□□□□□ -0.9
SSX2IP-208ENST00000490476 PTGDRQ13258 359 aa9.45□□□□□ -0.9
SSX2IP-208ENST00000490476 LMTK3Q96Q04 1460 aa9.45□□□□□ -0.9
SSX2IP-208ENST00000490476 HOXB1P14653 301 aaPredicted RBP9.44□□□□□ -0.9
SSX2IP-208ENST00000490476 TTLL12Q14166 644 aaPredicted RBP9.44□□□□□ -0.9
SSX2IP-208ENST00000490476 ZNF710Q8N1W2 664 aa9.44□□□□□ -0.9
SSX2IP-208ENST00000490476 CDHR5Q9HBB8 845 aa9.44□□□□□ -0.9
SSX2IP-208ENST00000490476 RIMBP2O15034 1052 aa9.43□□□□□ -0.9
SSX2IP-208ENST00000490476 SLC34A2O95436 690 aa9.43□□□□□ -0.9
SSX2IP-208ENST00000490476 PARP9Q8IXQ6 854 aa9.43□□□□□ -0.9
SSX2IP-208ENST00000490476 ANO8Q9HCE9 1232 aaPredicted RBP9.43□□□□□ -0.9
SSX2IP-208ENST00000490476 ZSWIM6Q9HCJ5 1215 aa9.42□□□□□ -0.9
SSX2IP-208ENST00000490476 PCDHGA4Q9Y5G9 962 aa9.42□□□□□ -0.9
SSX2IP-208ENST00000490476 PHF14O94880 888 aa9.41□□□□□ -0.9
SSX2IP-208ENST00000490476 EN1Q05925 392 aaPredicted RBP9.41□□□□□ -0.9
SSX2IP-208ENST00000490476 AMHR2Q16671 573 aa9.41□□□□□ -0.9
SSX2IP-208ENST00000490476 HS3ST6Q96QI5 342 aa9.41□□□□□ -0.9
SSX2IP-208ENST00000490476 EPAS1Q99814 870 aa9.41□□□□□ -0.9
SSX2IP-208ENST00000490476 PCDHGA10Q9Y5H3 936 aa9.4□□□□□ -0.9
SSX2IP-208ENST00000490476 FAM205CA6NFA0 338 aa9.39□□□□□ -0.91
SSX2IP-208ENST00000490476 SOCS7O14512 581 aa9.39□□□□□ -0.91
SSX2IP-208ENST00000490476 TSR1Q2NL82 804 aaKnown RBP9.39□□□□□ -0.91
SSX2IP-208ENST00000490476 SUPT5HO00267 1087 aaKnown RBP9.38□□□□□ -0.91
SSX2IP-208ENST00000490476 DDRGK1Q96HY6 314 aa9.38□□□□□ -0.91
SSX2IP-208ENST00000490476 ARHGEF11O15085 1522 aa9.37□□□□□ -0.91
SSX2IP-208ENST00000490476 TYW1BQ6NUM6 668 aa9.37□□□□□ -0.91
SSX2IP-208ENST00000490476 NPDC1Q9NQX5 325 aaPredicted RBP9.37□□□□□ -0.91
SSX2IP-208ENST00000490476 POTEB3A0JP26 581 aa9.36□□□□□ -0.91
SSX2IP-208ENST00000490476 PLEKHG3A1L390 1219 aa9.36□□□□□ -0.91
SSX2IP-208ENST00000490476 POTEBQ6S5H4 581 aa9.36□□□□□ -0.91
SSX2IP-208ENST00000490476 GIGYF2Q6Y7W6 1299 aaKnown RBP9.35□□□□□ -0.91
SSX2IP-208ENST00000490476 SPNS2Q8IVW8 549 aa9.34□□□□□ -0.91
SSX2IP-208ENST00000490476 FAM161AQ3B820 660 aa9.33□□□□□ -0.92
SSX2IP-208ENST00000490476 GPR153Q6NV75 609 aa9.33□□□□□ -0.92
SSX2IP-208ENST00000490476 SMARCA2P51531 1590 aa9.33□□□□□ -0.92
SSX2IP-208ENST00000490476 MDM2Q00987 491 aaPredicted RBP9.32□□□□□ -0.92
SSX2IP-208ENST00000490476 ZNF454Q8N9F8 522 aa9.32□□□□□ -0.92
SSX2IP-208ENST00000490476 KHSRPQ92945 711 aaKnown RBP eCLIP9.32□□□□□ -0.92
SSX2IP-208ENST00000490476 FBXW7Q969H0 707 aa9.32□□□□□ -0.92
SSX2IP-208ENST00000490476 JPH4Q96JJ6 628 aa9.32□□□□□ -0.92
SSX2IP-208ENST00000490476 REPIN1Q9BWE0 567 aaKnown RBP9.32□□□□□ -0.92
SSX2IP-208ENST00000490476 KRTAP3-3Q9BYR6 98 aa9.32□□□□□ -0.92
SSX2IP-208ENST00000490476 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
SSX2IP-208ENST00000490476 ERBB3P21860 1342 aa9.31□□□□□ -0.92
SSX2IP-208ENST00000490476 NUDT7P0C024 238 aa9.31□□□□□ -0.92
SSX2IP-208ENST00000490476 MS4A1P11836 297 aa9.31□□□□□ -0.92
SSX2IP-208ENST00000490476 ARSIQ5FYB1 569 aa9.3□□□□□ -0.92
SSX2IP-208ENST00000490476 KDM4FA0A1W2PPD8 638 aa9.29□□□□□ -0.92
SSX2IP-208ENST00000490476 CLCN1P35523 988 aa9.29□□□□□ -0.92
SSX2IP-208ENST00000490476 FOSBP53539 338 aa9.29□□□□□ -0.92
SSX2IP-208ENST00000490476 MMRN1Q13201 1228 aa9.29□□□□□ -0.92
SSX2IP-208ENST00000490476 C6orf132Q5T0Z8 1188 aa9.29□□□□□ -0.92
SSX2IP-208ENST00000490476 NLRP7Q8WX94 980 aa9.29□□□□□ -0.92
SSX2IP-208ENST00000490476 PHOX2BQ99453 314 aa9.29□□□□□ -0.92
SSX2IP-208ENST00000490476 NESP48681 1621 aa9.29□□□□□ -0.92
SSX2IP-208ENST00000490476 PADI6Q6TGC4 694 aa9.28□□□□□ -0.92
SSX2IP-208ENST00000490476 ZDHHC16Q969W1 377 aa9.28□□□□□ -0.92
SSX2IP-208ENST00000490476 KIF21AQ7Z4S6 1674 aa9.28□□□□□ -0.92
SSX2IP-208ENST00000490476 MYO15BQ96JP2 1530 aa9.27□□□□□ -0.93
SSX2IP-208ENST00000490476 GPCPD1Q9NPB8 672 aa9.27□□□□□ -0.93
SSX2IP-208ENST00000490476 ATP1B4Q9UN42 357 aaPredicted RBP9.27□□□□□ -0.93
SSX2IP-208ENST00000490476 ERCC6L2Q5T890 1561 aa9.27□□□□□ -0.93
SSX2IP-208ENST00000490476 VARS2Q5ST30 1063 aaKnown RBP9.26□□□□□ -0.93
SSX2IP-208ENST00000490476 ADAM33Q9BZ11 813 aa9.26□□□□□ -0.93
SSX2IP-208ENST00000490476 SSTR3P32745 418 aaPredicted RBP9.25□□□□□ -0.93
SSX2IP-208ENST00000490476 ZNF687Q8N1G0 1237 aa9.25□□□□□ -0.93
SSX2IP-208ENST00000490476 PCMTD1Q96MG8 357 aaPredicted RBP9.25□□□□□ -0.93
SSX2IP-208ENST00000490476 OATP04181 439 aa9.24□□□□□ -0.93
SSX2IP-208ENST00000490476 CYB5RLQ6IPT4 315 aa9.24□□□□□ -0.93
SSX2IP-208ENST00000490476 METTL3Q86U44 580 aaKnown RBP9.24□□□□□ -0.93
SSX2IP-208ENST00000490476 CERKQ8TCT0 537 aa9.24□□□□□ -0.93
SSX2IP-208ENST00000490476 FBXO41Q8TF61 875 aa9.24□□□□□ -0.93
SSX2IP-208ENST00000490476 ARXQ96QS3 562 aa9.24□□□□□ -0.93
SSX2IP-208ENST00000490476 ZMYND15Q9H091 742 aa9.24□□□□□ -0.93
SSX2IP-208ENST00000490476 TMUB1Q9BVT8 246 aa9.23□□□□□ -0.93
SSX2IP-208ENST00000490476 ILDR2Q71H61 639 aa9.22□□□□□ -0.93
SSX2IP-208ENST00000490476 ADGRG1Q9Y653 693 aa9.22□□□□□ -0.93
SSX2IP-208ENST00000490476 PXYLP1Q8TE99 480 aa9.21□□□□□ -0.94
SSX2IP-208ENST00000490476 BEGAINQ9BUH8 593 aa9.21□□□□□ -0.94
SSX2IP-208ENST00000490476 LHX6Q9UPM6 363 aa9.21□□□□□ -0.94
SSX2IP-208ENST00000490476 PRSS12P56730 875 aa9.2□□□□□ -0.94
SSX2IP-208ENST00000490476 GOPCQ9HD26 462 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms