RNA–Protein interactions for RNA: ENST00000490322.1

SMYD3-215, Transcript of SET and MYND domain containing 3, human

TSL 3

Gene SMYD3, Length 368 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMYD3-215	ENST00000490322	SHROOM4	Q9ULL8	1493 aa		5.04	□□□□□ -1.6
SMYD3-215	ENST00000490322	NACAD	O15069	1562 aa		5.04	□□□□□ -1.6
SMYD3-215	ENST00000490322	WDR70	Q9NW82	654 aa		5.03	□□□□□ -1.6
SMYD3-215	ENST00000490322	STK24	Q9Y6E0	443 aa		5.03	□□□□□ -1.6
SMYD3-215	ENST00000490322	C14orf37	Q86TY3	774 aa		5.02	□□□□□ -1.61
SMYD3-215	ENST00000490322	DAXX	Q9UER7	740 aa	Predicted RBP	5.02	□□□□□ -1.61
SMYD3-215	ENST00000490322	UNC13A	Q9UPW8	1703 aa		5.02	□□□□□ -1.61
SMYD3-215	ENST00000490322	HOMEZ	Q8IX15	550 aa		5.01	□□□□□ -1.61
SMYD3-215	ENST00000490322	ZNF454	Q8N9F8	522 aa		5.01	□□□□□ -1.61
SMYD3-215	ENST00000490322	ZBED2	Q9BTP6	218 aa		5.01	□□□□□ -1.61
SMYD3-215	ENST00000490322	BCL2L12	Q9HB09	334 aa		5.01	□□□□□ -1.61
SMYD3-215	ENST00000490322	SCRIB	Q14160	1630 aa		5.01	□□□□□ -1.61
SMYD3-215	ENST00000490322	RB1CC1	Q8TDY2	1594 aa		5	□□□□□ -1.61
SMYD3-215	ENST00000490322	GFRA3	O60609	400 aa		5	□□□□□ -1.61
SMYD3-215	ENST00000490322	PLPP6	Q8IY26	295 aa		5	□□□□□ -1.61
SMYD3-215	ENST00000490322	TBC1D12	O60347	775 aa		4.99	□□□□□ -1.61
SMYD3-215	ENST00000490322	LMOD2	Q6P5Q4	547 aa		4.99	□□□□□ -1.61
SMYD3-215	ENST00000490322	NBPF3	Q9H094	633 aa		4.99	□□□□□ -1.61
SMYD3-215	ENST00000490322	PTPRE	P23469	700 aa		4.98	□□□□□ -1.61
SMYD3-215	ENST00000490322	FOXK1	P85037	733 aa		4.98	□□□□□ -1.61
SMYD3-215	ENST00000490322	PPP1R37	O75864	691 aa		4.97	□□□□□ -1.61
SMYD3-215	ENST00000490322	BCAM	P50895	628 aa		4.97	□□□□□ -1.61
SMYD3-215	ENST00000490322	ANKK1	Q8NFD2	765 aa		4.97	□□□□□ -1.61
SMYD3-215	ENST00000490322	NRG2	O14511	850 aa	Predicted RBP	4.96	□□□□□ -1.62
SMYD3-215	ENST00000490322	KCNC4	Q03721	635 aa		4.96	□□□□□ -1.62
SMYD3-215	ENST00000490322	DSG2	Q14126	1118 aa		4.96	□□□□□ -1.62
SMYD3-215	ENST00000490322	ZNF787	Q6DD87	383 aa		4.96	□□□□□ -1.62
SMYD3-215	ENST00000490322	ZNF775	Q96BV0	537 aa	Predicted RBP	4.96	□□□□□ -1.62
SMYD3-215	ENST00000490322	FOSB	P53539	338 aa		4.95	□□□□□ -1.62
SMYD3-215	ENST00000490322	KCNV2	Q8TDN2	545 aa		4.95	□□□□□ -1.62
SMYD3-215	ENST00000490322	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
SMYD3-215	ENST00000490322	GPHN	Q9NQX3	736 aa	Predicted RBP	4.94	□□□□□ -1.62
SMYD3-215	ENST00000490322	NYAP1	Q6ZVC0	841 aa		4.93	□□□□□ -1.62
SMYD3-215	ENST00000490322	OXER1	Q8TDS5	423 aa		4.93	□□□□□ -1.62
SMYD3-215	ENST00000490322	UPF1	Q92900	1129 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
SMYD3-215	ENST00000490322	SOWAHB	A6NEL2	793 aa		4.92	□□□□□ -1.62
SMYD3-215	ENST00000490322	ARHGEF1	Q92888	912 aa	Known RBP	4.92	□□□□□ -1.62
SMYD3-215	ENST00000490322	JPH4	Q96JJ6	628 aa		4.92	□□□□□ -1.62
SMYD3-215	ENST00000490322	ADAM33	Q9BZ11	813 aa		4.92	□□□□□ -1.62
SMYD3-215	ENST00000490322	WBP1L	Q9NX94	342 aa		4.92	□□□□□ -1.62
SMYD3-215	ENST00000490322	BRPF1	P55201	1214 aa	Predicted RBP	4.91	□□□□□ -1.62
SMYD3-215	ENST00000490322	PRKD2	Q9BZL6	878 aa		4.91	□□□□□ -1.62
SMYD3-215	ENST00000490322	NEUROD2	Q15784	382 aa		4.9	□□□□□ -1.63
SMYD3-215	ENST00000490322	PROX2	Q3B8N5	592 aa		4.9	□□□□□ -1.63
SMYD3-215	ENST00000490322	SMYD5	Q6GMV2	418 aa		4.9	□□□□□ -1.63
SMYD3-215	ENST00000490322	ZDHHC16	Q969W1	377 aa		4.9	□□□□□ -1.63
SMYD3-215	ENST00000490322	RABGEF1	Q9UJ41	708 aa		4.9	□□□□□ -1.63
SMYD3-215	ENST00000490322	PPP1R3G	B7ZBB8	358 aa		4.88	□□□□□ -1.63
SMYD3-215	ENST00000490322	E2F4	Q16254	413 aa		4.88	□□□□□ -1.63
SMYD3-215	ENST00000490322	CADPS2	Q86UW7	1296 aa		4.87	□□□□□ -1.63
SMYD3-215	ENST00000490322	LAPTM4B	Q86VI4	370 aa		4.87	□□□□□ -1.63
SMYD3-215	ENST00000490322	ZC3H15	Q8WU90	426 aa	Known RBP	4.87	□□□□□ -1.63
SMYD3-215	ENST00000490322	ZFR	Q96KR1	1074 aa	Known RBP	4.87	□□□□□ -1.63
SMYD3-215	ENST00000490322	PDZRN3	Q9UPQ7	1066 aa		4.87	□□□□□ -1.63
SMYD3-215	ENST00000490322	COL9A1	P20849	921 aa		4.86	□□□□□ -1.63
SMYD3-215	ENST00000490322	TESPA1	A2RU30	521 aa	Predicted RBP	4.85	□□□□□ -1.63
SMYD3-215	ENST00000490322	SUPT5H	O00267	1087 aa	Known RBP	4.85	□□□□□ -1.63
SMYD3-215	ENST00000490322	ANO8	Q9HCE9	1232 aa	Predicted RBP	4.85	□□□□□ -1.63
SMYD3-215	ENST00000490322	SEPT9	Q9UHD8	586 aa	Predicted RBP	4.85	□□□□□ -1.63
SMYD3-215	ENST00000490322		V9GY48	417 aa	Predicted RBP	4.85	□□□□□ -1.63
SMYD3-215	ENST00000490322	EVI5	O60447	810 aa		4.84	□□□□□ -1.63
SMYD3-215	ENST00000490322	KIAA1468	Q9P260	1216 aa		4.84	□□□□□ -1.63
SMYD3-215	ENST00000490322	TSR3	Q9UJK0	312 aa	Known RBP	4.84	□□□□□ -1.63
SMYD3-215	ENST00000490322	HPS5	Q9UPZ3	1129 aa		4.84	□□□□□ -1.63
SMYD3-215	ENST00000490322	BICRA	Q9NZM4	1560 aa		4.83	□□□□□ -1.64
SMYD3-215	ENST00000490322	SLC24A3	Q9HC58	644 aa		4.83	□□□□□ -1.64
SMYD3-215	ENST00000490322	PPP1R15B	Q5SWA1	713 aa		4.82	□□□□□ -1.64
SMYD3-215	ENST00000490322	PPP1R18	Q6NYC8	613 aa		4.82	□□□□□ -1.64
SMYD3-215	ENST00000490322	LRCH3	Q96II8	777 aa		4.82	□□□□□ -1.64
SMYD3-215	ENST00000490322	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	4.82	□□□□□ -1.64
SMYD3-215	ENST00000490322	WIZ	O95785	1651 aa		4.81	□□□□□ -1.64
SMYD3-215	ENST00000490322	ZMYND10	O75800	440 aa		4.81	□□□□□ -1.64
SMYD3-215	ENST00000490322	TJAP1	Q5JTD0	557 aa		4.81	□□□□□ -1.64
SMYD3-215	ENST00000490322	SMARCA4	P51532	1647 aa		4.81	□□□□□ -1.64
SMYD3-215	ENST00000490322	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	4.81	□□□□□ -1.64
SMYD3-215	ENST00000490322	POTEC	B2RU33	542 aa		4.8	□□□□□ -1.64
SMYD3-215	ENST00000490322	SEMA3E	O15041	775 aa		4.8	□□□□□ -1.64
SMYD3-215	ENST00000490322	PDE4A	P27815	886 aa		4.8	□□□□□ -1.64
SMYD3-215	ENST00000490322	FAM98C	Q17RN3	349 aa	Known RBP	4.8	□□□□□ -1.64
SMYD3-215	ENST00000490322	LCE2A	Q5TA79	106 aa	Predicted RBP	4.8	□□□□□ -1.64
SMYD3-215	ENST00000490322	ARIH1	Q9Y4X5	557 aa	Predicted RBP	4.8	□□□□□ -1.64
SMYD3-215	ENST00000490322	PCDHGA10	Q9Y5H3	936 aa		4.8	□□□□□ -1.64
SMYD3-215	ENST00000490322	MROH2B	Q7Z745	1585 aa		4.79	□□□□□ -1.64
SMYD3-215	ENST00000490322	CRISPLD2	Q9H0B8	497 aa		4.79	□□□□□ -1.64
SMYD3-215	ENST00000490322	RSF1	Q96T23	1441 aa	Predicted RBP	4.79	□□□□□ -1.64
SMYD3-215	ENST00000490322	CECR2	Q9BXF3	1484 aa		4.78	□□□□□ -1.64
SMYD3-215	ENST00000490322	MFSD10	Q14728	455 aa		4.78	□□□□□ -1.64
SMYD3-215	ENST00000490322	TREML4	Q6UXN2	200 aa		4.78	□□□□□ -1.64
SMYD3-215	ENST00000490322	BARGIN	Q6ZT62	677 aa		4.78	□□□□□ -1.64
SMYD3-215	ENST00000490322	GPIHBP1	Q8IV16	184 aa		4.78	□□□□□ -1.64
SMYD3-215	ENST00000490322	AK7	Q96M32	723 aa		4.78	□□□□□ -1.64
SMYD3-215	ENST00000490322	MTR	Q99707	1265 aa		4.78	□□□□□ -1.64
SMYD3-215	ENST00000490322	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.78	□□□□□ -1.64
SMYD3-215	ENST00000490322	LOC100996750	A0A140TA64	210 aa		4.77	□□□□□ -1.65
SMYD3-215	ENST00000490322	RANGAP1	P46060	587 aa	Predicted RBP	4.77	□□□□□ -1.65
SMYD3-215	ENST00000490322	FBXW7	Q969H0	707 aa		4.77	□□□□□ -1.65
SMYD3-215	ENST00000490322	DDX27	Q96GQ7	796 aa	Known RBP	4.77	□□□□□ -1.65
SMYD3-215	ENST00000490322	KRTAP4-6	Q9BYQ5	205 aa		4.77	□□□□□ -1.65
SMYD3-215	ENST00000490322	IL21	Q9HBE4	155 aa		4.77	□□□□□ -1.65
SMYD3-215	ENST00000490322	TRIM6-TRIM34	B2RNG4	842 aa		4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms