RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 ROCK1Q13464 1354 aa27.61■■■□□ 2.01
NSMCE4A-211ENST00000489266 TARBP1Q13395 1621 aaKnown RBP27.59■■■□□ 2.01
NSMCE4A-211ENST00000489266 SLC4A1APQ9BWU0 796 aaKnown RBP27.58■■■□□ 2.01
NSMCE4A-211ENST00000489266 KIF14Q15058 1648 aa27.56■■■□□ 2
NSMCE4A-211ENST00000489266 FSD2A1L4K1 749 aa27.56■■■□□ 2
NSMCE4A-211ENST00000489266 VIRMAQ69YN4 1812 aaKnown RBP27.56■■■□□ 2
NSMCE4A-211ENST00000489266 GOLGA6L3A6NEY3 463 aa27.54■■■□□ 2
NSMCE4A-211ENST00000489266 C20orf194Q5TEA3 1177 aa27.52■■■□□ 2
NSMCE4A-211ENST00000489266 CENPJQ9HC77 1338 aaPredicted RBP27.51■■□□□ 1.99
NSMCE4A-211ENST00000489266 NLRP13Q86W25 1043 aa27.51■■□□□ 1.99
NSMCE4A-211ENST00000489266 INSRP06213 1382 aa27.51■■□□□ 1.99
NSMCE4A-211ENST00000489266 USP19O94966 1318 aa27.5■■□□□ 1.99
NSMCE4A-211ENST00000489266 PANK2Q9BZ23 570 aa27.49■■□□□ 1.99
NSMCE4A-211ENST00000489266 MRC2Q9UBG0 1479 aa27.49■■□□□ 1.99
NSMCE4A-211ENST00000489266 DAPK1P53355 1430 aa27.46■■□□□ 1.99
NSMCE4A-211ENST00000489266 BECN1Q14457 450 aa27.46■■□□□ 1.99
NSMCE4A-211ENST00000489266 ZMYM4Q5VZL5 1548 aa27.46■■□□□ 1.99
NSMCE4A-211ENST00000489266 PDCL3Q9H2J4 239 aa27.45■■□□□ 1.99
NSMCE4A-211ENST00000489266 ANTXR1Q9H6X2 564 aa27.45■■□□□ 1.99
NSMCE4A-211ENST00000489266 UHRF1BP1Q6BDS2 1440 aa27.45■■□□□ 1.99
NSMCE4A-211ENST00000489266 RGS3P49796 1198 aa27.45■■□□□ 1.98
NSMCE4A-211ENST00000489266 ARXQ96QS3 562 aa27.45■■□□□ 1.98
NSMCE4A-211ENST00000489266 E9PCH4 1651 aa27.45■■□□□ 1.98
NSMCE4A-211ENST00000489266 RALGAPBQ86X10 1494 aa27.44■■□□□ 1.98
NSMCE4A-211ENST00000489266 PARD3Q8TEW0 1356 aa27.44■■□□□ 1.98
NSMCE4A-211ENST00000489266 SLKQ9H2G2 1235 aaPredicted RBP27.44■■□□□ 1.98
NSMCE4A-211ENST00000489266 PZPP20742 1482 aa27.43■■□□□ 1.98
NSMCE4A-211ENST00000489266 ZNF326Q5BKZ1 582 aaKnown RBP27.42■■□□□ 1.98
NSMCE4A-211ENST00000489266 TPM2P07951 284 aa27.42■■□□□ 1.98
NSMCE4A-211ENST00000489266 CALD1Q05682 793 aaKnown RBP27.41■■□□□ 1.98
NSMCE4A-211ENST00000489266 PBRM1Q86U86 1689 aa27.41■■□□□ 1.98
NSMCE4A-211ENST00000489266 BLMP54132 1417 aaPredicted RBP27.4■■□□□ 1.98
NSMCE4A-211ENST00000489266 ABCC5O15440 1437 aa27.39■■□□□ 1.98
NSMCE4A-211ENST00000489266 PLEKHH2Q8IVE3 1493 aa27.39■■□□□ 1.98
NSMCE4A-211ENST00000489266 ESPNB1AK53 854 aa27.39■■□□□ 1.98
NSMCE4A-211ENST00000489266 DNMT1P26358 1616 aaKnown RBP27.38■■□□□ 1.97
NSMCE4A-211ENST00000489266 KIAA1107Q9UPP5 1409 aa27.37■■□□□ 1.97
NSMCE4A-211ENST00000489266 CARD11Q9BXL7 1154 aa27.37■■□□□ 1.97
NSMCE4A-211ENST00000489266 PRDM4Q9UKN5 801 aa27.36■■□□□ 1.97
NSMCE4A-211ENST00000489266 MRE11P49959 708 aa27.36■■□□□ 1.97
NSMCE4A-211ENST00000489266 ERBB4Q15303 1308 aa27.34■■□□□ 1.97
NSMCE4A-211ENST00000489266 EPRSP07814 1512 aaKnown RBP27.34■■□□□ 1.97
NSMCE4A-211ENST00000489266 RBM10P98175 930 aaKnown RBP27.33■■□□□ 1.97
NSMCE4A-211ENST00000489266 ST20-MTHFSA0A0A6YYL1 179 aa27.33■■□□□ 1.96
NSMCE4A-211ENST00000489266 NLRP1Q9C000 1473 aa27.31■■□□□ 1.96
NSMCE4A-211ENST00000489266 IFT140Q96RY7 1462 aa27.31■■□□□ 1.96
NSMCE4A-211ENST00000489266 ADAMTS12P58397 1594 aa27.31■■□□□ 1.96
NSMCE4A-211ENST00000489266 MCM4P33991 863 aa27.3■■□□□ 1.96
NSMCE4A-211ENST00000489266 MYH16Q9H6N6 1097 aa27.3■■□□□ 1.96
NSMCE4A-211ENST00000489266 GZF1Q9H116 711 aaPredicted RBP27.29■■□□□ 1.96
NSMCE4A-211ENST00000489266 WDR62O43379 1518 aa27.29■■□□□ 1.96
NSMCE4A-211ENST00000489266 SEC24BO95487 1268 aa27.29■■□□□ 1.96
NSMCE4A-211ENST00000489266 ARHGEF12Q9NZN5 1544 aa27.26■■□□□ 1.95
NSMCE4A-211ENST00000489266 PER1O15534 1290 aaPredicted RBP27.26■■□□□ 1.95
NSMCE4A-211ENST00000489266 GRPEL1Q9HAV7 217 aa27.24■■□□□ 1.95
NSMCE4A-211ENST00000489266 IQGAP2Q13576 1575 aa27.24■■□□□ 1.95
NSMCE4A-211ENST00000489266 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.24■■□□□ 1.95
NSMCE4A-211ENST00000489266 AAMPQ13685 434 aa27.23■■□□□ 1.95
NSMCE4A-211ENST00000489266 TRAK2O60296 914 aa27.22■■□□□ 1.95
NSMCE4A-211ENST00000489266 PKD2Q13563 968 aa27.22■■□□□ 1.95
NSMCE4A-211ENST00000489266 ISY1Q9ULR0 285 aaKnown RBP27.22■■□□□ 1.95
NSMCE4A-211ENST00000489266 ZNF608Q9ULD9 1512 aaPredicted RBP27.22■■□□□ 1.95
NSMCE4A-211ENST00000489266 CDK13Q14004 1512 aaKnown RBP27.21■■□□□ 1.95
NSMCE4A-211ENST00000489266 A0A0U1RQG5 324 aaPredicted RBP27.2■■□□□ 1.95
NSMCE4A-211ENST00000489266 TBC1D2Q9BYX2 928 aa27.2■■□□□ 1.95
NSMCE4A-211ENST00000489266 EIF3AQ14152 1382 aaKnown RBP27.2■■□□□ 1.94
NSMCE4A-211ENST00000489266 DUSP27Q5VZP5 1158 aa27.19■■□□□ 1.94
NSMCE4A-211ENST00000489266 TRIM44Q96DX7 344 aaPredicted RBP27.17■■□□□ 1.94
NSMCE4A-211ENST00000489266 KIAA1211Q6ZU35 1233 aa27.16■■□□□ 1.94
NSMCE4A-211ENST00000489266 MAPK8IP3Q9UPT6 1336 aa27.16■■□□□ 1.94
NSMCE4A-211ENST00000489266 ZNF644Q9H582 1327 aaPredicted RBP27.16■■□□□ 1.94
NSMCE4A-211ENST00000489266 SLC24A1O60721 1099 aa27.14■■□□□ 1.94
NSMCE4A-211ENST00000489266 TBC1D32Q96NH3 1257 aa27.13■■□□□ 1.93
NSMCE4A-211ENST00000489266 IGHDP01880 384 aa27.12■■□□□ 1.93
NSMCE4A-211ENST00000489266 KIAA0586Q9BVV6 1533 aa27.09■■□□□ 1.93
NSMCE4A-211ENST00000489266 ZNF521Q96K83 1311 aa27.09■■□□□ 1.93
NSMCE4A-211ENST00000489266 FGD1P98174 961 aa27.09■■□□□ 1.93
NSMCE4A-211ENST00000489266 UPF2Q9HAU5 1272 aaKnown RBP27.09■■□□□ 1.93
NSMCE4A-211ENST00000489266 CHMP5Q9NZZ3 219 aa27.09■■□□□ 1.93
NSMCE4A-211ENST00000489266 ADGBQ8N7X0 1667 aa27.09■■□□□ 1.93
NSMCE4A-211ENST00000489266 PLEKHH1Q9ULM0 1364 aa27.09■■□□□ 1.93
NSMCE4A-211ENST00000489266 MAP7D2Q96T17 732 aa27.07■■□□□ 1.92
NSMCE4A-211ENST00000489266 ADGRL2O95490 1459 aa27.07■■□□□ 1.92
NSMCE4A-211ENST00000489266 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
NSMCE4A-211ENST00000489266 CC2D1BQ5T0F9 858 aaKnown RBP27.07■■□□□ 1.92
NSMCE4A-211ENST00000489266 ADAMTS8Q9UP79 889 aa27.07■■□□□ 1.92
NSMCE4A-211ENST00000489266 TERF1P54274 439 aa27.06■■□□□ 1.92
NSMCE4A-211ENST00000489266 GOLGA2Q08379 1002 aa27.06■■□□□ 1.92
NSMCE4A-211ENST00000489266 RIPK4P57078 832 aa27.06■■□□□ 1.92
NSMCE4A-211ENST00000489266 DDX11L8A8MPP1 907 aa27.05■■□□□ 1.92
NSMCE4A-211ENST00000489266 KDM2AQ9Y2K7 1162 aa27.05■■□□□ 1.92
NSMCE4A-211ENST00000489266 OFD1O75665 1012 aa27.04■■□□□ 1.92
NSMCE4A-211ENST00000489266 EIF4G3O43432 1585 aaKnown RBP27.04■■□□□ 1.92
NSMCE4A-211ENST00000489266 SPRYD3Q8NCJ5 442 aa27.02■■□□□ 1.92
NSMCE4A-211ENST00000489266 GRIN2AQ12879 1464 aa27.01■■□□□ 1.91
NSMCE4A-211ENST00000489266 SLFN5Q08AF3 891 aa27■■□□□ 1.91
NSMCE4A-211ENST00000489266 TRMT2AQ8IZ69 625 aaKnown RBP27■■□□□ 1.91
NSMCE4A-211ENST00000489266 SMAP1Q8IYB5 467 aaPredicted RBP26.99■■□□□ 1.91
NSMCE4A-211ENST00000489266 COL17A1Q9UMD9 1497 aaPredicted RBP26.99■■□□□ 1.91
NSMCE4A-211ENST00000489266 ZMYM3Q14202 1370 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms