RNA–Protein interactions for RNA: ENST00000487704.5

RTCB-205, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-205ENST00000487704 IQGAP1P46940 1657 aa13.08□□□□□ -0.32
RTCB-205ENST00000487704 TRIM52Q96A61 297 aa13.07□□□□□ -0.32
RTCB-205ENST00000487704 FAM135AQ9P2D6 1515 aa13.07□□□□□ -0.32
RTCB-205ENST00000487704 NLRP1Q9C000 1473 aa13.06□□□□□ -0.32
RTCB-205ENST00000487704 ATP1B4Q9UN42 357 aaPredicted RBP13.06□□□□□ -0.32
RTCB-205ENST00000487704 UGGT1Q9NYU2 1555 aa13.06□□□□□ -0.32
RTCB-205ENST00000487704 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
RTCB-205ENST00000487704 MIA2Q96PC5 1412 aa13.05□□□□□ -0.32
RTCB-205ENST00000487704 JCADQ9P266 1359 aa13.05□□□□□ -0.32
RTCB-205ENST00000487704 CDK12Q9NYV4 1490 aaPredicted RBP13.04□□□□□ -0.32
RTCB-205ENST00000487704 RXRBP28702 533 aa13.04□□□□□ -0.32
RTCB-205ENST00000487704 PZPP20742 1482 aa13.04□□□□□ -0.32
RTCB-205ENST00000487704 KDM5DQ9BY66 1539 aa13.03□□□□□ -0.32
RTCB-205ENST00000487704 FMN1Q68DA7 1419 aa13.03□□□□□ -0.32
RTCB-205ENST00000487704 ATP7AQ04656 1500 aa13.03□□□□□ -0.32
RTCB-205ENST00000487704 HNRNPMP52272 730 aaKnown RBP eCLIP13.01□□□□□ -0.33
RTCB-205ENST00000487704 FOXD1Q16676 465 aa13.01□□□□□ -0.33
RTCB-205ENST00000487704 XIRP1Q702N8 1843 aaKnown RBP13.01□□□□□ -0.33
RTCB-205ENST00000487704 ROBO1Q9Y6N7 1651 aa13□□□□□ -0.33
RTCB-205ENST00000487704 SPATA31A6Q5VVP1 1343 aa13□□□□□ -0.33
RTCB-205ENST00000487704 KIAA1107Q9UPP5 1409 aa12.99□□□□□ -0.33
RTCB-205ENST00000487704 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
RTCB-205ENST00000487704 ZC3H13Q5T200 1668 aaKnown RBP12.99□□□□□ -0.33
RTCB-205ENST00000487704 INO80Q9ULG1 1556 aaPredicted RBP12.98□□□□□ -0.33
RTCB-205ENST00000487704 ZNF777Q9ULD5 760 aaPredicted RBP12.97□□□□□ -0.33
RTCB-205ENST00000487704 SYCP2Q9BX26 1530 aa12.97□□□□□ -0.33
RTCB-205ENST00000487704 LRRC9Q6ZRR7 1453 aa12.97□□□□□ -0.33
RTCB-205ENST00000487704 MEX3CQ5U5Q3 659 aaKnown RBP12.96□□□□□ -0.33
RTCB-205ENST00000487704 LRP6O75581 1613 aa12.95□□□□□ -0.34
RTCB-205ENST00000487704 TMEM94Q12767 1356 aa12.95□□□□□ -0.34
RTCB-205ENST00000487704 WASHC2CQ9Y4E1 1318 aa12.95□□□□□ -0.34
RTCB-205ENST00000487704 DHX29Q7Z478 1369 aaKnown RBP12.94□□□□□ -0.34
RTCB-205ENST00000487704 CDC42BPAQ5VT25 1732 aa12.94□□□□□ -0.34
RTCB-205ENST00000487704 ADGBQ8N7X0 1667 aa12.94□□□□□ -0.34
RTCB-205ENST00000487704 SLAIN2Q9P270 581 aa12.94□□□□□ -0.34
RTCB-205ENST00000487704 FGD6Q6ZV73 1430 aa12.94□□□□□ -0.34
RTCB-205ENST00000487704 PLEKHH2Q8IVE3 1493 aa12.93□□□□□ -0.34
RTCB-205ENST00000487704 SCAF11Q99590 1463 aaKnown RBP12.93□□□□□ -0.34
RTCB-205ENST00000487704 KIF3BO15066 747 aa12.92□□□□□ -0.34
RTCB-205ENST00000487704 PHLPP1O60346 1717 aa12.92□□□□□ -0.34
RTCB-205ENST00000487704 LTKP29376 864 aa12.92□□□□□ -0.34
RTCB-205ENST00000487704 TXNDC2Q86VQ3 553 aa12.91□□□□□ -0.34
RTCB-205ENST00000487704 GPATCH8Q9UKJ3 1502 aaKnown RBP12.91□□□□□ -0.34
RTCB-205ENST00000487704 SETBP1Q9Y6X0 1596 aa12.9□□□□□ -0.34
RTCB-205ENST00000487704 KCNA6P17658 529 aa12.9□□□□□ -0.34
RTCB-205ENST00000487704 RTEL1-TNFRSF6BF6WH68 1400 aa12.89□□□□□ -0.35
RTCB-205ENST00000487704 MAP3K1Q13233 1512 aa12.89□□□□□ -0.35
RTCB-205ENST00000487704 PROSER2Q86WR7 435 aaPredicted RBP12.89□□□□□ -0.35
RTCB-205ENST00000487704 COL16A1Q07092 1604 aaPredicted RBP12.88□□□□□ -0.35
RTCB-205ENST00000487704 CFDP1Q9UEE9 299 aaPredicted RBP12.88□□□□□ -0.35
RTCB-205ENST00000487704 ARHGAP23Q9P227 1491 aa12.88□□□□□ -0.35
RTCB-205ENST00000487704 LRRIQ1Q96JM4 1722 aa12.88□□□□□ -0.35
RTCB-205ENST00000487704 RBM6P78332 1123 aaKnown RBP12.87□□□□□ -0.35
RTCB-205ENST00000487704 RBM33Q96EV2 1170 aaKnown RBP12.87□□□□□ -0.35
RTCB-205ENST00000487704 SLIT1O75093 1534 aa12.87□□□□□ -0.35
RTCB-205ENST00000487704 RGS12O14924 1447 aa12.87□□□□□ -0.35
RTCB-205ENST00000487704 MSH6P52701 1360 aa12.86□□□□□ -0.35
RTCB-205ENST00000487704 NUTM2BA6NNL0 878 aaPredicted RBP12.86□□□□□ -0.35
RTCB-205ENST00000487704 NUTM2EB1AL46 878 aaPredicted RBP12.86□□□□□ -0.35
RTCB-205ENST00000487704 NUTM2DQ5VT03 806 aaPredicted RBP12.86□□□□□ -0.35
RTCB-205ENST00000487704 NUTM2AQ8IVF1 878 aaPredicted RBP12.86□□□□□ -0.35
RTCB-205ENST00000487704 EID1Q9Y6B2 187 aa12.86□□□□□ -0.35
RTCB-205ENST00000487704 EEA1Q15075 1411 aa12.86□□□□□ -0.35
RTCB-205ENST00000487704 ARHGAP35Q9NRY4 1499 aa12.85□□□□□ -0.35
RTCB-205ENST00000487704 ATAD2Q6PL18 1390 aa12.85□□□□□ -0.35
RTCB-205ENST00000487704 PRDM15P57071 1507 aaPredicted RBP12.85□□□□□ -0.35
RTCB-205ENST00000487704 AFF2P51816 1311 aa12.85□□□□□ -0.35
RTCB-205ENST00000487704 NCOA2Q15596 1464 aa12.85□□□□□ -0.35
RTCB-205ENST00000487704 CCDC18Q5T9S5 1454 aa12.85□□□□□ -0.35
RTCB-205ENST00000487704 QTRT2Q9H974 415 aaKnown RBP12.84□□□□□ -0.35
RTCB-205ENST00000487704 ABCC3O15438 1527 aa12.83□□□□□ -0.35
RTCB-205ENST00000487704 UBR1Q8IWV7 1749 aa12.83□□□□□ -0.36
RTCB-205ENST00000487704 CCDC125Q86Z20 511 aa12.83□□□□□ -0.36
RTCB-205ENST00000487704 SHPRHQ149N8 1683 aa12.83□□□□□ -0.36
RTCB-205ENST00000487704 MBD5Q9P267 1494 aa12.82□□□□□ -0.36
RTCB-205ENST00000487704 NKTRP30414 1462 aaKnown RBP12.81□□□□□ -0.36
RTCB-205ENST00000487704 ERVK-7P63135 1459 aa12.81□□□□□ -0.36
RTCB-205ENST00000487704 NGLY1Q96IV0 654 aa12.8□□□□□ -0.36
RTCB-205ENST00000487704 TIAM1Q13009 1591 aa12.8□□□□□ -0.36
RTCB-205ENST00000487704 CASKIN1Q8WXD9 1431 aa12.79□□□□□ -0.36
RTCB-205ENST00000487704 AHDC1Q5TGY3 1603 aaPredicted RBP12.78□□□□□ -0.36
RTCB-205ENST00000487704 TMEM2Q9UHN6 1383 aa12.78□□□□□ -0.36
RTCB-205ENST00000487704 EP400Q96L91 3159 aa12.77□□□□□ -0.37
RTCB-205ENST00000487704 IFFO2Q5TF58 517 aa12.77□□□□□ -0.37
RTCB-205ENST00000487704 SLC26A8Q96RN1 970 aa12.77□□□□□ -0.37
RTCB-205ENST00000487704 ZNF644Q9H582 1327 aaPredicted RBP12.77□□□□□ -0.37
RTCB-205ENST00000487704 CCNB3Q8WWL7 1395 aa12.77□□□□□ -0.37
RTCB-205ENST00000487704 TET3O43151 1660 aa12.77□□□□□ -0.37
RTCB-205ENST00000487704 NCOA3Q9Y6Q9 1424 aa12.76□□□□□ -0.37
RTCB-205ENST00000487704 LRP5O75197 1615 aa12.75□□□□□ -0.37
RTCB-205ENST00000487704 NWD1Q149M9 1564 aa12.75□□□□□ -0.37
RTCB-205ENST00000487704 CAMSAP2Q08AD1 1489 aa12.74□□□□□ -0.37
RTCB-205ENST00000487704 RSPH4AQ5TD94 716 aa12.74□□□□□ -0.37
RTCB-205ENST00000487704 DIP2AQ14689 1571 aa12.73□□□□□ -0.37
RTCB-205ENST00000487704 UBTFP17480 764 aaKnown RBP12.73□□□□□ -0.37
RTCB-205ENST00000487704 CADPS2Q86UW7 1296 aa12.73□□□□□ -0.37
RTCB-205ENST00000487704 C8orf37Q96NL8 207 aa12.72□□□□□ -0.37
RTCB-205ENST00000487704 KDM5AP29375 1690 aaKnown RBP12.72□□□□□ -0.37
RTCB-205ENST00000487704 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.38
RTCB-205ENST00000487704 C19orf44Q9H6X5 657 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms