RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 KIAA1211Q6ZU35 1233 aa16.87■□□□□ 0.29
HDLBP-241ENST00000487169 PRKRIP1Q9H875 184 aaPredicted RBP16.87■□□□□ 0.29
HDLBP-241ENST00000487169 FAM69CQ0P6D2 419 aa16.87■□□□□ 0.29
HDLBP-241ENST00000487169 CFAP44Q96MT7 982 aa16.87■□□□□ 0.29
HDLBP-241ENST00000487169 LMOD3Q0VAK6 560 aa16.86■□□□□ 0.29
HDLBP-241ENST00000487169 MYOM3Q5VTT5 1437 aa16.86■□□□□ 0.29
HDLBP-241ENST00000487169 CENPJQ9HC77 1338 aaPredicted RBP16.86■□□□□ 0.29
HDLBP-241ENST00000487169 KIF15Q9NS87 1388 aa16.86■□□□□ 0.29
HDLBP-241ENST00000487169 EVC2Q86UK5 1308 aa16.85■□□□□ 0.29
HDLBP-241ENST00000487169 ELL2O00472 640 aaPredicted RBP16.85■□□□□ 0.29
HDLBP-241ENST00000487169 MYBBP1AQ9BQG0 1328 aaKnown RBP16.85■□□□□ 0.29
HDLBP-241ENST00000487169 UACAQ9BZF9 1416 aa16.85■□□□□ 0.29
HDLBP-241ENST00000487169 CFTRP13569 1480 aa16.85■□□□□ 0.29
HDLBP-241ENST00000487169 USP47Q96K76 1375 aa16.85■□□□□ 0.29
HDLBP-241ENST00000487169 DNTTIP2Q5QJE6 756 aaKnown RBP16.84■□□□□ 0.29
HDLBP-241ENST00000487169 PRXQ9BXM0 1461 aa16.84■□□□□ 0.29
HDLBP-241ENST00000487169 CUX1P39880 1505 aa16.84■□□□□ 0.29
HDLBP-241ENST00000487169 HMGXB3Q12766 1538 aa16.84■□□□□ 0.29
HDLBP-241ENST00000487169 PHLDB1Q86UU1 1377 aa16.84■□□□□ 0.29
HDLBP-241ENST00000487169 CGNL1Q0VF96 1302 aa16.83■□□□□ 0.28
HDLBP-241ENST00000487169 COG3Q96JB2 828 aa16.83■□□□□ 0.28
HDLBP-241ENST00000487169 TCERG1O14776 1098 aaKnown RBP16.82■□□□□ 0.28
HDLBP-241ENST00000487169 HDAC5Q9UQL6 1122 aa16.82■□□□□ 0.28
HDLBP-241ENST00000487169 PMFBP1Q8TBY8 1022 aa16.82■□□□□ 0.28
HDLBP-241ENST00000487169 CHMP3Q9Y3E7 222 aa16.82■□□□□ 0.28
HDLBP-241ENST00000487169 HMMRO75330 724 aa16.82■□□□□ 0.28
HDLBP-241ENST00000487169 AFAP1Q8N556 730 aa16.8■□□□□ 0.28
HDLBP-241ENST00000487169 FANCIQ9NVI1 1328 aa16.8■□□□□ 0.28
HDLBP-241ENST00000487169 GORABQ5T7V8 394 aa16.8■□□□□ 0.28
HDLBP-241ENST00000487169 BCL2L13Q9BXK5 485 aa16.8■□□□□ 0.28
HDLBP-241ENST00000487169 ISY1Q9ULR0 285 aaKnown RBP16.8■□□□□ 0.28
HDLBP-241ENST00000487169 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
HDLBP-241ENST00000487169 GLIPR1L2Q4G1C9 344 aa16.79■□□□□ 0.28
HDLBP-241ENST00000487169 ARAP1Q96P48 1450 aa16.79■□□□□ 0.28
HDLBP-241ENST00000487169 MSH5O43196 834 aa16.78■□□□□ 0.28
HDLBP-241ENST00000487169 TAF7LQ5H9L4 462 aa16.78■□□□□ 0.28
HDLBP-241ENST00000487169 ERICH3Q5RHP9 1530 aa16.78■□□□□ 0.28
HDLBP-241ENST00000487169 APAF1O14727 1248 aa16.78■□□□□ 0.28
HDLBP-241ENST00000487169 SLKQ9H2G2 1235 aaPredicted RBP16.77■□□□□ 0.28
HDLBP-241ENST00000487169 TRIM6-TRIM34B2RNG4 842 aa16.76■□□□□ 0.27
HDLBP-241ENST00000487169 MFAP1P55081 439 aaKnown RBP16.74■□□□□ 0.27
HDLBP-241ENST00000487169 TEFQ10587 303 aa16.74■□□□□ 0.27
HDLBP-241ENST00000487169 ANKRD50Q9ULJ7 1429 aa16.74■□□□□ 0.27
HDLBP-241ENST00000487169 GTF2E1P29083 439 aaPredicted RBP16.73■□□□□ 0.27
HDLBP-241ENST00000487169 PLIN1O60240 522 aa16.72■□□□□ 0.27
HDLBP-241ENST00000487169 STAC3Q96MF2 364 aa16.72■□□□□ 0.27
HDLBP-241ENST00000487169 NRDCO43847 1150 aa16.71■□□□□ 0.27
HDLBP-241ENST00000487169 GNL2Q13823 731 aaKnown RBP16.71■□□□□ 0.27
HDLBP-241ENST00000487169 CC2D2AQ9P2K1 1620 aa16.71■□□□□ 0.27
HDLBP-241ENST00000487169 RTN4Q9NQC3 1192 aaKnown RBP16.71■□□□□ 0.26
HDLBP-241ENST00000487169 E9PSI1 815 aa16.7■□□□□ 0.26
HDLBP-241ENST00000487169 GRIN2BQ13224 1484 aa16.7■□□□□ 0.26
HDLBP-241ENST00000487169 DIAPH1O60610 1272 aaKnown RBP16.7■□□□□ 0.26
HDLBP-241ENST00000487169 TMEM132EQ6IEE7 984 aa16.7■□□□□ 0.26
HDLBP-241ENST00000487169 GPATCH3Q96I76 525 aa16.7■□□□□ 0.26
HDLBP-241ENST00000487169 C1orf141Q5JVX7 400 aa16.69■□□□□ 0.26
HDLBP-241ENST00000487169 LRRC9Q6ZRR7 1453 aa16.69■□□□□ 0.26
HDLBP-241ENST00000487169 BIVM-ERCC5R4GMW8 1640 aa16.69■□□□□ 0.26
HDLBP-241ENST00000487169 PSME1Q06323 249 aa16.68■□□□□ 0.26
HDLBP-241ENST00000487169 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.68■□□□□ 0.26
HDLBP-241ENST00000487169 ZKSCAN2Q63HK3 967 aa16.68■□□□□ 0.26
HDLBP-241ENST00000487169 NESP48681 1621 aa16.67■□□□□ 0.26
HDLBP-241ENST00000487169 EVA1CP58658 441 aa16.67■□□□□ 0.26
HDLBP-241ENST00000487169 TMX4Q9H1E5 349 aaPredicted RBP16.67■□□□□ 0.26
HDLBP-241ENST00000487169 COG6Q9Y2V7 657 aa16.67■□□□□ 0.26
HDLBP-241ENST00000487169 ZBED9Q6R2W3 1325 aa16.66■□□□□ 0.26
HDLBP-241ENST00000487169 CASKIN1Q8WXD9 1431 aa16.66■□□□□ 0.26
HDLBP-241ENST00000487169 GOLGA6L6A8MZA4 724 aa16.66■□□□□ 0.26
HDLBP-241ENST00000487169 GBP4Q96PP9 640 aa16.66■□□□□ 0.26
HDLBP-241ENST00000487169 KIF7Q2M1P5 1343 aa16.66■□□□□ 0.26
HDLBP-241ENST00000487169 NCOA2Q15596 1464 aa16.66■□□□□ 0.26
HDLBP-241ENST00000487169 CFAP70Q5T0N1 1121 aa16.65■□□□□ 0.26
HDLBP-241ENST00000487169 GGNBP2Q9H3C7 697 aa16.65■□□□□ 0.26
HDLBP-241ENST00000487169 PRKCSHP14314 528 aaPredicted RBP16.64■□□□□ 0.26
HDLBP-241ENST00000487169 RIPK4P57078 832 aa16.64■□□□□ 0.26
HDLBP-241ENST00000487169 FRAT2O75474 233 aaPredicted RBP16.64■□□□□ 0.25
HDLBP-241ENST00000487169 EIF2S2P20042 333 aaKnown RBP16.64■□□□□ 0.25
HDLBP-241ENST00000487169 PRG4Q92954 1404 aaPredicted RBP16.64■□□□□ 0.25
HDLBP-241ENST00000487169 EXOC6Q8TAG9 804 aa16.64■□□□□ 0.25
HDLBP-241ENST00000487169 GZF1Q9H116 711 aaPredicted RBP16.63■□□□□ 0.25
HDLBP-241ENST00000487169 NGEFQ8N5V2 710 aa16.63■□□□□ 0.25
HDLBP-241ENST00000487169 ANKRD45Q5TZF3 282 aa16.62■□□□□ 0.25
HDLBP-241ENST00000487169 NOL8Q76FK4 1167 aaKnown RBP16.62■□□□□ 0.25
HDLBP-241ENST00000487169 RRP1P56182 461 aaKnown RBP16.61■□□□□ 0.25
HDLBP-241ENST00000487169 CCDC7Q96M83 1385 aa16.61■□□□□ 0.25
HDLBP-241ENST00000487169 NAP1L5Q96NT1 182 aaPredicted RBP16.61■□□□□ 0.25
HDLBP-241ENST00000487169 CABP2Q9NPB3 220 aa16.61■□□□□ 0.25
HDLBP-241ENST00000487169 TTC5Q8N0Z6 440 aa16.61■□□□□ 0.25
HDLBP-241ENST00000487169 FYCO1Q9BQS8 1478 aa16.6■□□□□ 0.25
HDLBP-241ENST00000487169 NECTIN2Q92692 538 aa16.6■□□□□ 0.25
HDLBP-241ENST00000487169 CRBNQ96SW2 442 aa16.6■□□□□ 0.25
HDLBP-241ENST00000487169 CENPQQ7L2Z9 268 aaPredicted RBP16.59■□□□□ 0.25
HDLBP-241ENST00000487169 NEXNQ0ZGT2 675 aa16.59■□□□□ 0.25
HDLBP-241ENST00000487169 L1TD1Q5T7N2 865 aaKnown RBP16.59■□□□□ 0.25
HDLBP-241ENST00000487169 TOMM22Q9NS69 142 aa16.59■□□□□ 0.25
HDLBP-241ENST00000487169 SYNJ2O15056 1496 aa16.59■□□□□ 0.25
HDLBP-241ENST00000487169 HMOX1P09601 288 aa16.59■□□□□ 0.25
HDLBP-241ENST00000487169 PRDM2Q13029 1718 aa16.59■□□□□ 0.25
HDLBP-241ENST00000487169 RRBP1Q9P2E9 1410 aaKnown RBP16.59■□□□□ 0.25
HDLBP-241ENST00000487169 DRC7Q8IY82 874 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms