RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 JPH4Q96JJ6 628 aa10.2□□□□□ -0.78
PRPF38A-203ENST00000487160 FOSBP53539 338 aa10.19□□□□□ -0.78
PRPF38A-203ENST00000487160 SCUBE2Q9NQ36 999 aa10.18□□□□□ -0.78
PRPF38A-203ENST00000487160 PARP9Q8IXQ6 854 aa10.17□□□□□ -0.78
PRPF38A-203ENST00000487160 ZNF454Q8N9F8 522 aa10.17□□□□□ -0.78
PRPF38A-203ENST00000487160 FAM117AQ9C073 453 aa10.17□□□□□ -0.78
PRPF38A-203ENST00000487160 DAXXQ9UER7 740 aaPredicted RBP10.17□□□□□ -0.78
PRPF38A-203ENST00000487160 GPR153Q6NV75 609 aa10.16□□□□□ -0.78
PRPF38A-203ENST00000487160 RIMBP2O15034 1052 aa10.15□□□□□ -0.78
PRPF38A-203ENST00000487160 TTLL12Q14166 644 aaPredicted RBP10.15□□□□□ -0.78
PRPF38A-203ENST00000487160 C6orf132Q5T0Z8 1188 aa10.15□□□□□ -0.78
PRPF38A-203ENST00000487160 MAMSTRQ6ZN01 415 aa10.15□□□□□ -0.78
PRPF38A-203ENST00000487160 ERICH6Q7L0X2 663 aa10.15□□□□□ -0.78
PRPF38A-203ENST00000487160 ZDHHC16Q969W1 377 aa10.15□□□□□ -0.78
PRPF38A-203ENST00000487160 ZSWIM6Q9HCJ5 1215 aa10.15□□□□□ -0.78
PRPF38A-203ENST00000487160 ZNF710Q8N1W2 664 aa10.13□□□□□ -0.79
PRPF38A-203ENST00000487160 C14orf37Q86TY3 774 aa10.12□□□□□ -0.79
PRPF38A-203ENST00000487160 ADAM33Q9BZ11 813 aa10.12□□□□□ -0.79
PRPF38A-203ENST00000487160 REPIN1Q9BWE0 567 aaKnown RBP10.11□□□□□ -0.79
PRPF38A-203ENST00000487160 PLEKHG3A1L390 1219 aa10.1□□□□□ -0.79
PRPF38A-203ENST00000487160 FAM161AQ3B820 660 aa10.1□□□□□ -0.79
PRPF38A-203ENST00000487160 PADI6Q6TGC4 694 aa10.1□□□□□ -0.79
PRPF38A-203ENST00000487160 CERKQ8TCT0 537 aa10.1□□□□□ -0.79
PRPF38A-203ENST00000487160 DDRGK1Q96HY6 314 aa10.1□□□□□ -0.79
PRPF38A-203ENST00000487160 PHOX2BQ99453 314 aa10.1□□□□□ -0.79
PRPF38A-203ENST00000487160 LHX6Q9UPM6 363 aa10.1□□□□□ -0.79
PRPF38A-203ENST00000487160 GIGYF2Q6Y7W6 1299 aaKnown RBP10.09□□□□□ -0.79
PRPF38A-203ENST00000487160 MDM2Q00987 491 aaPredicted RBP10.07□□□□□ -0.8
PRPF38A-203ENST00000487160 MS4A1P11836 297 aa10.06□□□□□ -0.8
PRPF38A-203ENST00000487160 TMUB1Q9BVT8 246 aa10.06□□□□□ -0.8
PRPF38A-203ENST00000487160 OATP04181 439 aa10.05□□□□□ -0.8
PRPF38A-203ENST00000487160 CLCN1P35523 988 aa10.05□□□□□ -0.8
PRPF38A-203ENST00000487160 METTL3Q86U44 580 aaKnown RBP10.05□□□□□ -0.8
PRPF38A-203ENST00000487160 ADGRG1Q9Y653 693 aa10.05□□□□□ -0.8
PRPF38A-203ENST00000487160 PRSS12P56730 875 aa10.04□□□□□ -0.8
PRPF38A-203ENST00000487160 PPP4R3BQ5MIZ7 849 aa10.04□□□□□ -0.8
PRPF38A-203ENST00000487160 TTC13Q8NBP0 860 aa10.04□□□□□ -0.8
PRPF38A-203ENST00000487160 GPCPD1Q9NPB8 672 aa10.04□□□□□ -0.8
PRPF38A-203ENST00000487160 SNPHO15079 494 aa10.03□□□□□ -0.8
PRPF38A-203ENST00000487160 NLRP7Q8WX94 980 aa10.03□□□□□ -0.8
PRPF38A-203ENST00000487160 CDCA7LQ96GN5 454 aa10.03□□□□□ -0.8
PRPF38A-203ENST00000487160 RBM27Q9P2N5 1060 aaKnown RBP10.03□□□□□ -0.8
PRPF38A-203ENST00000487160 HOXB1P14653 301 aaPredicted RBP10.02□□□□□ -0.81
PRPF38A-203ENST00000487160 COL9A1P20849 921 aa10.02□□□□□ -0.81
PRPF38A-203ENST00000487160 PXYLP1Q8TE99 480 aa10.02□□□□□ -0.81
PRPF38A-203ENST00000487160 PSDA5PKW4 1024 aaPredicted RBP10.01□□□□□ -0.81
PRPF38A-203ENST00000487160 SSTR3P32745 418 aaPredicted RBP10.01□□□□□ -0.81
PRPF38A-203ENST00000487160 BCL2L12Q9HB09 334 aa10.01□□□□□ -0.81
PRPF38A-203ENST00000487160 FAM198AQ9UFP1 575 aa10□□□□□ -0.81
PRPF38A-203ENST00000487160 OTUD5Q96G74 571 aa9.98□□□□□ -0.81
PRPF38A-203ENST00000487160 PTPREP23469 700 aa9.97□□□□□ -0.81
PRPF38A-203ENST00000487160 RBM46Q8TBY0 533 aaKnown RBP9.97□□□□□ -0.81
PRPF38A-203ENST00000487160 FAM217BQ9NTX9 383 aaPredicted RBP9.97□□□□□ -0.81
PRPF38A-203ENST00000487160 GOPCQ9HD26 462 aa9.96□□□□□ -0.82
PRPF38A-203ENST00000487160 TSKSQ9UJT2 592 aa9.96□□□□□ -0.82
PRPF38A-203ENST00000487160 PPP1R3GB7ZBB8 358 aa9.95□□□□□ -0.82
PRPF38A-203ENST00000487160 BEGAINQ9BUH8 593 aa9.95□□□□□ -0.82
PRPF38A-203ENST00000487160 EYA1Q99502 592 aa9.94□□□□□ -0.82
PRPF38A-203ENST00000487160 PCMTD1Q96MG8 357 aaPredicted RBP9.93□□□□□ -0.82
PRPF38A-203ENST00000487160 RCCD1A6NED2 376 aa9.92□□□□□ -0.82
PRPF38A-203ENST00000487160 C3orf80F5H4A9 247 aa9.92□□□□□ -0.82
PRPF38A-203ENST00000487160 SH3D19Q5HYK7 790 aa9.92□□□□□ -0.82
PRPF38A-203ENST00000487160 NUDT18Q6ZVK8 323 aa9.92□□□□□ -0.82
PRPF38A-203ENST00000487160 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.91□□□□□ -0.82
PRPF38A-203ENST00000487160 KCNK17Q96T54 332 aa9.91□□□□□ -0.82
PRPF38A-203ENST00000487160 RSPH6AQ9H0K4 717 aa9.91□□□□□ -0.82
PRPF38A-203ENST00000487160 TRIM6-TRIM34B2RNG4 842 aa9.9□□□□□ -0.82
PRPF38A-203ENST00000487160 TATDN2Q93075 761 aa9.9□□□□□ -0.82
PRPF38A-203ENST00000487160 PNMA3Q9UL41 463 aa9.9□□□□□ -0.82
PRPF38A-203ENST00000487160 SKIV2LQ15477 1246 aaKnown RBP9.89□□□□□ -0.83
PRPF38A-203ENST00000487160 PROX2Q3B8N5 592 aa9.89□□□□□ -0.83
PRPF38A-203ENST00000487160 PACS2Q86VP3 889 aa9.89□□□□□ -0.83
PRPF38A-203ENST00000487160 NBPF26B4DH59 902 aa9.88□□□□□ -0.83
PRPF38A-203ENST00000487160 POLR3EQ9NVU0 708 aa9.88□□□□□ -0.83
PRPF38A-203ENST00000487160 SMAPO00193 183 aa9.87□□□□□ -0.83
PRPF38A-203ENST00000487160 SUPT5HO00267 1087 aaKnown RBP9.87□□□□□ -0.83
PRPF38A-203ENST00000487160 LHX8Q68G74 356 aa9.87□□□□□ -0.83
PRPF38A-203ENST00000487160 PROCA1Q8NCQ7 364 aaPredicted RBP9.86□□□□□ -0.83
PRPF38A-203ENST00000487160 ATP1B4Q9UN42 357 aaPredicted RBP9.86□□□□□ -0.83
PRPF38A-203ENST00000487160 ONECUT3O60422 494 aaPredicted RBP9.85□□□□□ -0.83
PRPF38A-203ENST00000487160 DNAJB2P25686 324 aa9.85□□□□□ -0.83
PRPF38A-203ENST00000487160 PSEN2P49810 448 aa9.85□□□□□ -0.83
PRPF38A-203ENST00000487160 KCNH8Q96L42 1107 aa9.85□□□□□ -0.83
PRPF38A-203ENST00000487160 ZMYND15Q9H091 742 aa9.85□□□□□ -0.83
PRPF38A-203ENST00000487160 ERBB3P21860 1342 aa9.84□□□□□ -0.83
PRPF38A-203ENST00000487160 MYSM1Q5VVJ2 828 aa9.84□□□□□ -0.83
PRPF38A-203ENST00000487160 ZBED2Q9BTP6 218 aa9.84□□□□□ -0.83
PRPF38A-203ENST00000487160 TBC1D2Q9BYX2 928 aa9.84□□□□□ -0.83
PRPF38A-203ENST00000487160 KIAA1468Q9P260 1216 aa9.84□□□□□ -0.83
PRPF38A-203ENST00000487160 CD46P15529 392 aa9.83□□□□□ -0.84
PRPF38A-203ENST00000487160 VARS2Q5ST30 1063 aaKnown RBP9.83□□□□□ -0.84
PRPF38A-203ENST00000487160 TMEM134Q9H6X4 195 aa9.83□□□□□ -0.84
PRPF38A-203ENST00000487160 DDX11L8A8MPP1 907 aa9.82□□□□□ -0.84
PRPF38A-203ENST00000487160 POTEEQ6S8J3 1075 aa9.82□□□□□ -0.84
PRPF38A-203ENST00000487160 ST18O60284 1047 aa9.81□□□□□ -0.84
PRPF38A-203ENST00000487160 FLIIQ13045 1269 aa9.81□□□□□ -0.84
PRPF38A-203ENST00000487160 SULF1Q8IWU6 871 aa9.81□□□□□ -0.84
PRPF38A-203ENST00000487160 SPIRE2Q8WWL2 714 aa9.81□□□□□ -0.84
PRPF38A-203ENST00000487160 AXIN2Q9Y2T1 843 aa9.81□□□□□ -0.84
PRPF38A-203ENST00000487160 ARHGAP33O14559 1287 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms