RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-223ENST00000481173 CAMK2BQ13554 666 aa10.27□□□□□ -0.77
CCNL1-223ENST00000481173 ANKK1Q8NFD2 765 aa10.26□□□□□ -0.77
CCNL1-223ENST00000481173 BCAMP50895 628 aa10.25□□□□□ -0.77
CCNL1-223ENST00000481173 KIAA1468Q9P260 1216 aa10.25□□□□□ -0.77
CCNL1-223ENST00000481173 C6orf132Q5T0Z8 1188 aa10.24□□□□□ -0.77
CCNL1-223ENST00000481173 DDX12PQ92771 950 aa10.24□□□□□ -0.77
CCNL1-223ENST00000481173 RBM33Q96EV2 1170 aaKnown RBP10.24□□□□□ -0.77
CCNL1-223ENST00000481173 IFFO2Q5TF58 517 aa10.22□□□□□ -0.77
CCNL1-223ENST00000481173 EPAS1Q99814 870 aa10.22□□□□□ -0.77
CCNL1-223ENST00000481173 SEPT9Q9UHD8 586 aaPredicted RBP10.22□□□□□ -0.77
CCNL1-223ENST00000481173 A0A0G2JS52 829 aa10.21□□□□□ -0.77
CCNL1-223ENST00000481173 BBXQ8WY36 941 aaPredicted RBP10.21□□□□□ -0.77
CCNL1-223ENST00000481173 LAPTM4BQ86VI4 370 aa10.19□□□□□ -0.78
CCNL1-223ENST00000481173 ZFRQ96KR1 1074 aaKnown RBP10.19□□□□□ -0.78
CCNL1-223ENST00000481173 SOWAHBA6NEL2 793 aa10.18□□□□□ -0.78
CCNL1-223ENST00000481173 TRIM6-TRIM34B2RNG4 842 aa10.17□□□□□ -0.78
CCNL1-223ENST00000481173 NBR1Q14596 966 aa10.16□□□□□ -0.78
CCNL1-223ENST00000481173 TSR1Q2NL82 804 aaKnown RBP10.16□□□□□ -0.78
CCNL1-223ENST00000481173 WBP1LQ9NX94 342 aa10.16□□□□□ -0.78
CCNL1-223ENST00000481173 ONECUT3O60422 494 aaPredicted RBP10.15□□□□□ -0.78
CCNL1-223ENST00000481173 RGS20O76081 388 aa10.15□□□□□ -0.78
CCNL1-223ENST00000481173 MAP3K7O43318 606 aa10.14□□□□□ -0.79
CCNL1-223ENST00000481173 ITGBL1O95965 494 aaPredicted RBP10.13□□□□□ -0.79
CCNL1-223ENST00000481173 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
CCNL1-223ENST00000481173 PDIA6Q15084 440 aa10.13□□□□□ -0.79
CCNL1-223ENST00000481173 FAM98CQ17RN3 349 aaKnown RBP10.13□□□□□ -0.79
CCNL1-223ENST00000481173 SPRYD3Q8NCJ5 442 aa10.12□□□□□ -0.79
CCNL1-223ENST00000481173 IRX2Q9BZI1 471 aaPredicted RBP10.12□□□□□ -0.79
CCNL1-223ENST00000481173 TSKSQ9UJT2 592 aa10.11□□□□□ -0.79
CCNL1-223ENST00000481173 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.1□□□□□ -0.79
CCNL1-223ENST00000481173 HPS5Q9UPZ3 1129 aa10.1□□□□□ -0.79
CCNL1-223ENST00000481173 LRCH3Q96II8 777 aa10.09□□□□□ -0.79
CCNL1-223ENST00000481173 PRIM1P49642 420 aaKnown RBP10.08□□□□□ -0.8
CCNL1-223ENST00000481173 NYAP1Q6ZVC0 841 aa10.08□□□□□ -0.8
CCNL1-223ENST00000481173 SPDYE16A6NNV3 312 aaPredicted RBP10.07□□□□□ -0.8
CCNL1-223ENST00000481173 SMAPO00193 183 aa10.07□□□□□ -0.8
CCNL1-223ENST00000481173 PACS2Q86VP3 889 aa10.07□□□□□ -0.8
CCNL1-223ENST00000481173 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.07□□□□□ -0.8
CCNL1-223ENST00000481173 TSR3Q9UJK0 312 aaKnown RBP10.07□□□□□ -0.8
CCNL1-223ENST00000481173 GRXCR2A6NFK2 248 aa10.06□□□□□ -0.8
CCNL1-223ENST00000481173 KCNC4Q03721 635 aa10.06□□□□□ -0.8
CCNL1-223ENST00000481173 E2F4Q16254 413 aa10.06□□□□□ -0.8
CCNL1-223ENST00000481173 CFAP44Q96MT7 982 aa10.06□□□□□ -0.8
CCNL1-223ENST00000481173 CDCA7LQ96GN5 454 aa10.05□□□□□ -0.8
CCNL1-223ENST00000481173 FAM198AQ9UFP1 575 aa10.05□□□□□ -0.8
CCNL1-223ENST00000481173 PAXIP1Q6ZW49 1069 aaPredicted RBP10.04□□□□□ -0.8
CCNL1-223ENST00000481173 PRSS12P56730 875 aa10.03□□□□□ -0.8
CCNL1-223ENST00000481173 C3orf80F5H4A9 247 aa10.02□□□□□ -0.81
CCNL1-223ENST00000481173 WDR70Q9NW82 654 aa10.02□□□□□ -0.81
CCNL1-223ENST00000481173 PPP4CP60510 307 aa10.01□□□□□ -0.81
CCNL1-223ENST00000481173 SAMD7Q7Z3H4 446 aa10.01□□□□□ -0.81
CCNL1-223ENST00000481173 CDHR5Q9HBB8 845 aa10.01□□□□□ -0.81
CCNL1-223ENST00000481173 PNMA3Q9UL41 463 aa9.99□□□□□ -0.81
CCNL1-223ENST00000481173 TATDN2Q93075 761 aa9.98□□□□□ -0.81
CCNL1-223ENST00000481173 RTN4Q9NQC3 1192 aaKnown RBP9.98□□□□□ -0.81
CCNL1-223ENST00000481173 ARIH1Q9Y4X5 557 aaPredicted RBP9.98□□□□□ -0.81
CCNL1-223ENST00000481173 OSBPP22059 807 aa9.97□□□□□ -0.81
CCNL1-223ENST00000481173 AMER1Q5JTC6 1135 aaPredicted RBP9.97□□□□□ -0.81
CCNL1-223ENST00000481173 CERKQ8TCT0 537 aa9.97□□□□□ -0.81
CCNL1-223ENST00000481173 NBPF26B4DH59 902 aa9.96□□□□□ -0.82
CCNL1-223ENST00000481173 RNF40O75150 1001 aa9.94□□□□□ -0.82
CCNL1-223ENST00000481173 NUDT18Q6ZVK8 323 aa9.94□□□□□ -0.82
CCNL1-223ENST00000481173 TJAP1Q5JTD0 557 aa9.93□□□□□ -0.82
CCNL1-223ENST00000481173 Q6ZNB5 142 aa9.92□□□□□ -0.82
CCNL1-223ENST00000481173 MTRQ99707 1265 aa9.91□□□□□ -0.82
CCNL1-223ENST00000481173 PADI6Q6TGC4 694 aa9.89□□□□□ -0.83
CCNL1-223ENST00000481173 APLP1P51693 650 aa9.88□□□□□ -0.83
CCNL1-223ENST00000481173 ZNF516Q92618 1163 aa9.88□□□□□ -0.83
CCNL1-223ENST00000481173 IL21Q9HBE4 155 aa9.88□□□□□ -0.83
CCNL1-223ENST00000481173 HDGFP51858 240 aaKnown RBP9.87□□□□□ -0.83
CCNL1-223ENST00000481173 NPDC1Q9NQX5 325 aaPredicted RBP9.87□□□□□ -0.83
CCNL1-223ENST00000481173 RBM27Q9P2N5 1060 aaKnown RBP9.87□□□□□ -0.83
CCNL1-223ENST00000481173 SWT1Q5T5J6 900 aaKnown RBP9.86□□□□□ -0.83
CCNL1-223ENST00000481173 PPP1R18Q6NYC8 613 aa9.85□□□□□ -0.83
CCNL1-223ENST00000481173 TTC13Q8NBP0 860 aa9.85□□□□□ -0.83
CCNL1-223ENST00000481173 PRKD2Q9BZL6 878 aa9.85□□□□□ -0.83
CCNL1-223ENST00000481173 GFRA3O60609 400 aa9.83□□□□□ -0.84
CCNL1-223ENST00000481173 MLLT3P42568 568 aaPredicted RBP9.83□□□□□ -0.84
CCNL1-223ENST00000481173 NKX2-3Q8TAU0 364 aa9.83□□□□□ -0.84
CCNL1-223ENST00000481173 COPS2P61201 443 aa9.82□□□□□ -0.84
CCNL1-223ENST00000481173 TSHZ2Q9NRE2 1034 aa9.81□□□□□ -0.84
CCNL1-223ENST00000481173 SLF2Q8IX21 1173 aa9.8□□□□□ -0.84
CCNL1-223ENST00000481173 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.8□□□□□ -0.84
CCNL1-223ENST00000481173 LCE2BO14633 110 aa9.79□□□□□ -0.84
CCNL1-223ENST00000481173 LAPTM4AQ15012 233 aa9.79□□□□□ -0.84
CCNL1-223ENST00000481173 EYA1Q99502 592 aa9.79□□□□□ -0.84
CCNL1-223ENST00000481173 KCNV2Q8TDN2 545 aa9.77□□□□□ -0.85
CCNL1-223ENST00000481173 NECTIN2Q92692 538 aa9.76□□□□□ -0.85
CCNL1-223ENST00000481173 ARHGEF1Q92888 912 aaKnown RBP9.75□□□□□ -0.85
CCNL1-223ENST00000481173 V9GY48 417 aaPredicted RBP9.75□□□□□ -0.85
CCNL1-223ENST00000481173 SLC4A3P48751 1232 aa9.74□□□□□ -0.85
CCNL1-223ENST00000481173 TRAF7Q6Q0C0 670 aa9.74□□□□□ -0.85
CCNL1-223ENST00000481173 PTGDRQ13258 359 aa9.73□□□□□ -0.85
CCNL1-223ENST00000481173 NRG2O14511 850 aaPredicted RBP9.72□□□□□ -0.85
CCNL1-223ENST00000481173 ZPR1O75312 459 aa9.72□□□□□ -0.85
CCNL1-223ENST00000481173 FAM161AQ3B820 660 aa9.72□□□□□ -0.85
CCNL1-223ENST00000481173 PCDHB3Q9Y5E6 796 aa9.72□□□□□ -0.85
CCNL1-223ENST00000481173 GGCXP38435 758 aa9.71□□□□□ -0.86
CCNL1-223ENST00000481173 NUTM2FA1L443 756 aa9.7□□□□□ -0.86
CCNL1-223ENST00000481173 DNAJB2P25686 324 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms