RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 PRDM2Q13029 1718 aa11.78□□□□□ -0.52
VEGFA-212ENST00000480614 STK26Q9P289 416 aa11.78□□□□□ -0.52
VEGFA-212ENST00000480614 ZNF330Q9Y3S2 320 aaPredicted RBP11.78□□□□□ -0.52
VEGFA-212ENST00000480614 SAFB2Q14151 953 aaKnown RBP eCLIP11.77□□□□□ -0.52
VEGFA-212ENST00000480614 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.52
VEGFA-212ENST00000480614 TRHP20396 242 aaPredicted RBP11.77□□□□□ -0.52
VEGFA-212ENST00000480614 HSPA5P11021 654 aaKnown RBP11.77□□□□□ -0.53
VEGFA-212ENST00000480614 TPD52L1Q16890 204 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-212ENST00000480614 NLRP13Q86W25 1043 aa11.77□□□□□ -0.53
VEGFA-212ENST00000480614 NUP155O75694 1391 aa11.77□□□□□ -0.53
VEGFA-212ENST00000480614 H3BQV1 296 aa11.77□□□□□ -0.53
VEGFA-212ENST00000480614 IFFO2Q5TF58 517 aa11.77□□□□□ -0.53
VEGFA-212ENST00000480614 KIF15Q9NS87 1388 aa11.76□□□□□ -0.53
VEGFA-212ENST00000480614 MLECQ14165 292 aa11.76□□□□□ -0.53
VEGFA-212ENST00000480614 VPS53Q5VIR6 699 aa11.76□□□□□ -0.53
VEGFA-212ENST00000480614 SKOR2Q2VWA4 1001 aaPredicted RBP11.76□□□□□ -0.53
VEGFA-212ENST00000480614 HOOK1Q9UJC3 728 aaKnown RBP11.76□□□□□ -0.53
VEGFA-212ENST00000480614 ANKRD20A12PQ8NF67 263 aa11.76□□□□□ -0.53
VEGFA-212ENST00000480614 TCEAL9Q9UHQ7 104 aa11.76□□□□□ -0.53
VEGFA-212ENST00000480614 MFAP1P55081 439 aaKnown RBP11.75□□□□□ -0.53
VEGFA-212ENST00000480614 EFCAB2Q5VUJ9 269 aa11.75□□□□□ -0.53
VEGFA-212ENST00000480614 GOLGA6L19H0YKK7 550 aa11.75□□□□□ -0.53
VEGFA-212ENST00000480614 NOL10Q9BSC4 688 aaKnown RBP11.75□□□□□ -0.53
VEGFA-212ENST00000480614 ROCK1Q13464 1354 aa11.75□□□□□ -0.53
VEGFA-212ENST00000480614 IPO7O95373 1038 aaKnown RBP11.74□□□□□ -0.53
VEGFA-212ENST00000480614 GTF2E1P29083 439 aaPredicted RBP11.74□□□□□ -0.53
VEGFA-212ENST00000480614 IPO9Q96P70 1041 aaKnown RBP11.74□□□□□ -0.53
VEGFA-212ENST00000480614 AMOTL1Q8IY63 956 aa11.74□□□□□ -0.53
VEGFA-212ENST00000480614 ANO8Q9HCE9 1232 aaPredicted RBP11.74□□□□□ -0.53
VEGFA-212ENST00000480614 FRAT2O75474 233 aaPredicted RBP11.74□□□□□ -0.53
VEGFA-212ENST00000480614 CPLX2Q6PUV4 134 aaKnown RBP11.74□□□□□ -0.53
VEGFA-212ENST00000480614 GZF1Q9H116 711 aaPredicted RBP11.74□□□□□ -0.53
VEGFA-212ENST00000480614 HSP90AA2PQ14568 343 aaPredicted RBP11.74□□□□□ -0.53
VEGFA-212ENST00000480614 GGT6Q6P531 493 aa11.74□□□□□ -0.53
VEGFA-212ENST00000480614 SYNE3Q6ZMZ3 975 aa11.73□□□□□ -0.53
VEGFA-212ENST00000480614 RUFY2Q8WXA3 655 aa11.73□□□□□ -0.53
VEGFA-212ENST00000480614 CREBRFQ8IUR6 639 aa11.73□□□□□ -0.53
VEGFA-212ENST00000480614 CCDC47Q96A33 483 aaKnown RBP11.72□□□□□ -0.53
VEGFA-212ENST00000480614 TOMM22Q9NS69 142 aa11.71□□□□□ -0.53
VEGFA-212ENST00000480614 FAM184AQ8NB25 1140 aa11.71□□□□□ -0.53
VEGFA-212ENST00000480614 AMPHP49418 695 aa11.71□□□□□ -0.53
VEGFA-212ENST00000480614 TRIM34Q9BYJ4 488 aa11.71□□□□□ -0.54
VEGFA-212ENST00000480614 RAB3GAP2Q9H2M9 1393 aa11.71□□□□□ -0.54
VEGFA-212ENST00000480614 BECN2A8MW95 431 aa11.7□□□□□ -0.54
VEGFA-212ENST00000480614 REC8O95072 547 aa11.7□□□□□ -0.54
VEGFA-212ENST00000480614 NGEFQ8N5V2 710 aa11.7□□□□□ -0.54
VEGFA-212ENST00000480614 MPHOSPH9Q99550 1183 aa11.7□□□□□ -0.54
VEGFA-212ENST00000480614 CGNL1Q0VF96 1302 aa11.7□□□□□ -0.54
VEGFA-212ENST00000480614 NGDNQ8NEJ9 315 aaKnown RBP11.69□□□□□ -0.54
VEGFA-212ENST00000480614 PES1O00541 588 aaKnown RBP11.69□□□□□ -0.54
VEGFA-212ENST00000480614 TEX35Q5T0J7 233 aa11.69□□□□□ -0.54
VEGFA-212ENST00000480614 CENPQQ7L2Z9 268 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-212ENST00000480614 WWC1Q8IX03 1113 aa11.69□□□□□ -0.54
VEGFA-212ENST00000480614 SLC4A10Q6U841 1118 aa11.69□□□□□ -0.54
VEGFA-212ENST00000480614 CDR1P51861 262 aa11.68□□□□□ -0.54
VEGFA-212ENST00000480614 PDE4CQ08493 712 aa11.68□□□□□ -0.54
VEGFA-212ENST00000480614 C1orf141Q5JVX7 400 aa11.68□□□□□ -0.54
VEGFA-212ENST00000480614 DIAPH3Q9NSV4 1193 aa11.68□□□□□ -0.54
VEGFA-212ENST00000480614 TRIM29Q14134 588 aa11.68□□□□□ -0.54
VEGFA-212ENST00000480614 CCDC144AA2RUR9 1427 aa11.67□□□□□ -0.54
VEGFA-212ENST00000480614 ZKSCAN1P17029 563 aaPredicted RBP11.67□□□□□ -0.54
VEGFA-212ENST00000480614 NEXNQ0ZGT2 675 aa11.67□□□□□ -0.54
VEGFA-212ENST00000480614 TSHZ2Q9NRE2 1034 aa11.67□□□□□ -0.54
VEGFA-212ENST00000480614 CCDC9Q9Y3X0 531 aaKnown RBP11.67□□□□□ -0.54
VEGFA-212ENST00000480614 AMER1Q5JTC6 1135 aaPredicted RBP11.67□□□□□ -0.54
VEGFA-212ENST00000480614 ABCC8Q09428 1581 aa11.66□□□□□ -0.54
VEGFA-212ENST00000480614 FANCIQ9NVI1 1328 aa11.66□□□□□ -0.54
VEGFA-212ENST00000480614 RRP12Q5JTH9 1297 aaKnown RBP11.66□□□□□ -0.54
VEGFA-212ENST00000480614 TOP2AP11388 1531 aaKnown RBP11.66□□□□□ -0.54
VEGFA-212ENST00000480614 RDXP35241 583 aaKnown RBP11.66□□□□□ -0.54
VEGFA-212ENST00000480614 CTDP1Q9Y5B0 961 aaPredicted RBP11.66□□□□□ -0.54
VEGFA-212ENST00000480614 RNF20Q5VTR2 975 aa11.66□□□□□ -0.54
VEGFA-212ENST00000480614 ACBD3Q9H3P7 528 aa11.66□□□□□ -0.54
VEGFA-212ENST00000480614 MYBBP1AQ9BQG0 1328 aaKnown RBP11.66□□□□□ -0.54
VEGFA-212ENST00000480614 AK7Q96M32 723 aa11.65□□□□□ -0.54
VEGFA-212ENST00000480614 WASHC2CQ9Y4E1 1318 aa11.65□□□□□ -0.54
VEGFA-212ENST00000480614 CCAR2Q8N163 923 aaKnown RBP11.65□□□□□ -0.54
VEGFA-212ENST00000480614 ZKSCAN2Q63HK3 967 aa11.65□□□□□ -0.55
VEGFA-212ENST00000480614 EVC2Q86UK5 1308 aa11.65□□□□□ -0.55
VEGFA-212ENST00000480614 E9PSI1 815 aa11.64□□□□□ -0.55
VEGFA-212ENST00000480614 ARID3AQ99856 593 aa11.64□□□□□ -0.55
VEGFA-212ENST00000480614 MCTP1Q6DN14 999 aa11.64□□□□□ -0.55
VEGFA-212ENST00000480614 CCDC43Q96MW1 224 aaKnown RBP11.64□□□□□ -0.55
VEGFA-212ENST00000480614 CUX1P39880 1505 aa11.64□□□□□ -0.55
VEGFA-212ENST00000480614 AAMPQ13685 434 aa11.63□□□□□ -0.55
VEGFA-212ENST00000480614 CPLX1O14810 134 aa11.63□□□□□ -0.55
VEGFA-212ENST00000480614 COG3Q96JB2 828 aa11.63□□□□□ -0.55
VEGFA-212ENST00000480614 WASHC2AQ641Q2 1341 aa11.63□□□□□ -0.55
VEGFA-212ENST00000480614 SOGA1O94964 1423 aa11.63□□□□□ -0.55
VEGFA-212ENST00000480614 TRDNQ13061 729 aa11.63□□□□□ -0.55
VEGFA-212ENST00000480614 KRI1Q8N9T8 703 aaKnown RBP11.63□□□□□ -0.55
VEGFA-212ENST00000480614 CALRP27797 417 aaKnown RBP11.62□□□□□ -0.55
VEGFA-212ENST00000480614 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.62□□□□□ -0.55
VEGFA-212ENST00000480614 FAM161AQ3B820 660 aa11.62□□□□□ -0.55
VEGFA-212ENST00000480614 RAPGEF2Q9Y4G8 1499 aa11.62□□□□□ -0.55
VEGFA-212ENST00000480614 TTC5Q8N0Z6 440 aa11.61□□□□□ -0.55
VEGFA-212ENST00000480614 SAFBQ15424 915 aaKnown RBP eCLIP11.61□□□□□ -0.55
VEGFA-212ENST00000480614 CNKSR2Q8WXI2 1034 aa11.61□□□□□ -0.55
VEGFA-212ENST00000480614 NOM1Q5C9Z4 860 aaKnown RBP11.61□□□□□ -0.55
VEGFA-212ENST00000480614 NOL8Q76FK4 1167 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms