RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 KCNH8Q96L42 1107 aa7.6□□□□□ -1.19
PRPF4B-205ENST00000480058 CNTLNQ9NXG0 1405 aa7.6□□□□□ -1.19
PRPF4B-205ENST00000480058 BRD4O60885 1362 aaPredicted RBP7.6□□□□□ -1.19
PRPF4B-205ENST00000480058 WWC1Q8IX03 1113 aa7.6□□□□□ -1.19
PRPF4B-205ENST00000480058 DIAPH3Q9NSV4 1193 aa7.6□□□□□ -1.19
PRPF4B-205ENST00000480058 LRRFIP1Q32MZ4 808 aaKnown RBP7.6□□□□□ -1.19
PRPF4B-205ENST00000480058 ITPRIPQ8IWB1 547 aa7.6□□□□□ -1.19
PRPF4B-205ENST00000480058 CCDC88BA6NC98 1476 aa7.6□□□□□ -1.19
PRPF4B-205ENST00000480058 FAM43AQ8N2R8 423 aa7.6□□□□□ -1.19
PRPF4B-205ENST00000480058 MCM2P49736 904 aa7.59□□□□□ -1.19
PRPF4B-205ENST00000480058 CIZ1Q9ULV3 898 aaPredicted RBP7.59□□□□□ -1.19
PRPF4B-205ENST00000480058 NINLQ9Y2I6 1382 aa7.59□□□□□ -1.19
PRPF4B-205ENST00000480058 TPM2P07951 284 aa7.59□□□□□ -1.19
PRPF4B-205ENST00000480058 PDS5BQ9NTI5 1447 aa7.59□□□□□ -1.19
PRPF4B-205ENST00000480058 CT47B1P0C2W7 299 aaPredicted RBP7.59□□□□□ -1.19
PRPF4B-205ENST00000480058 CPLX2Q6PUV4 134 aaKnown RBP7.59□□□□□ -1.19
PRPF4B-205ENST00000480058 SRPK2P78362 688 aaKnown RBP7.59□□□□□ -1.2
PRPF4B-205ENST00000480058 RUFY2Q8WXA3 655 aa7.58□□□□□ -1.2
PRPF4B-205ENST00000480058 PDE3AQ14432 1141 aa7.58□□□□□ -1.2
PRPF4B-205ENST00000480058 ROCK1Q13464 1354 aa7.58□□□□□ -1.2
PRPF4B-205ENST00000480058 ZNF428Q96B54 188 aa7.57□□□□□ -1.2
PRPF4B-205ENST00000480058 MFAP1P55081 439 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-205ENST00000480058 CAVIN1Q6NZI2 390 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-205ENST00000480058 HSP90AB4PQ58FF6 505 aa7.57□□□□□ -1.2
PRPF4B-205ENST00000480058 A0A0U1RQG5 324 aaPredicted RBP7.56□□□□□ -1.2
PRPF4B-205ENST00000480058 CCDC144AA2RUR9 1427 aa7.56□□□□□ -1.2
PRPF4B-205ENST00000480058 CCDC7Q96M83 1385 aa7.56□□□□□ -1.2
PRPF4B-205ENST00000480058 CADPSQ9ULU8 1353 aa7.56□□□□□ -1.2
PRPF4B-205ENST00000480058 ABCC8Q09428 1581 aa7.56□□□□□ -1.2
PRPF4B-205ENST00000480058 ZKSCAN1P17029 563 aaPredicted RBP7.56□□□□□ -1.2
PRPF4B-205ENST00000480058 TEX35Q5T0J7 233 aa7.56□□□□□ -1.2
PRPF4B-205ENST00000480058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.56□□□□□ -1.2
PRPF4B-205ENST00000480058 ST20-MTHFSA0A0A6YYL1 179 aa7.56□□□□□ -1.2
PRPF4B-205ENST00000480058 GNL2Q13823 731 aaKnown RBP7.56□□□□□ -1.2
PRPF4B-205ENST00000480058 ARGLU1Q9NWB6 273 aaPredicted RBP7.56□□□□□ -1.2
PRPF4B-205ENST00000480058 TOP2AP11388 1531 aaKnown RBP7.56□□□□□ -1.2
PRPF4B-205ENST00000480058 MYOM3Q5VTT5 1437 aa7.56□□□□□ -1.2
PRPF4B-205ENST00000480058 USP47Q96K76 1375 aa7.55□□□□□ -1.2
PRPF4B-205ENST00000480058 TPM1P09493 284 aa7.55□□□□□ -1.2
PRPF4B-205ENST00000480058 GZF1Q9H116 711 aaPredicted RBP7.55□□□□□ -1.2
PRPF4B-205ENST00000480058 BECN2A8MW95 431 aa7.55□□□□□ -1.2
PRPF4B-205ENST00000480058 GOLGA6L19H0YKK7 550 aa7.55□□□□□ -1.2
PRPF4B-205ENST00000480058 ACBD3Q9H3P7 528 aa7.55□□□□□ -1.2
PRPF4B-205ENST00000480058 CCDC70Q6NSX1 233 aa7.55□□□□□ -1.2
PRPF4B-205ENST00000480058 MROH2BQ7Z745 1585 aa7.55□□□□□ -1.2
PRPF4B-205ENST00000480058 LETM1O95202 739 aaPredicted RBP7.54□□□□□ -1.2
PRPF4B-205ENST00000480058 VSIG10Q8N0Z9 540 aa7.54□□□□□ -1.2
PRPF4B-205ENST00000480058 CCDC66A2RUB6 948 aa7.54□□□□□ -1.2
PRPF4B-205ENST00000480058 VGFO15240 615 aaPredicted RBP7.54□□□□□ -1.2
PRPF4B-205ENST00000480058 DZIP1LQ8IYY4 767 aaKnown RBP7.54□□□□□ -1.2
PRPF4B-205ENST00000480058 NFKBIBQ15653 356 aa7.54□□□□□ -1.2
PRPF4B-205ENST00000480058 PDCL2Q8N4E4 241 aa7.54□□□□□ -1.2
PRPF4B-205ENST00000480058 IPO7O95373 1038 aaKnown RBP7.54□□□□□ -1.2
PRPF4B-205ENST00000480058 PDCP20941 246 aa7.54□□□□□ -1.2
PRPF4B-205ENST00000480058 EXOC6Q8TAG9 804 aa7.54□□□□□ -1.2
PRPF4B-205ENST00000480058 CLUAP1Q96AJ1 413 aa7.53□□□□□ -1.2
PRPF4B-205ENST00000480058 SETQ01105 290 aaPredicted RBP7.53□□□□□ -1.2
PRPF4B-205ENST00000480058 RNF20Q5VTR2 975 aa7.53□□□□□ -1.2
PRPF4B-205ENST00000480058 C14orf37Q86TY3 774 aa7.53□□□□□ -1.2
PRPF4B-205ENST00000480058 FAM184AQ8NB25 1140 aa7.53□□□□□ -1.2
PRPF4B-205ENST00000480058 TSR1Q2NL82 804 aaKnown RBP7.53□□□□□ -1.2
PRPF4B-205ENST00000480058 CDR1P51861 262 aa7.52□□□□□ -1.2
PRPF4B-205ENST00000480058 CCDC39Q9UFE4 941 aa7.52□□□□□ -1.2
PRPF4B-205ENST00000480058 SF3A1Q15459 793 aaKnown RBP7.52□□□□□ -1.21
PRPF4B-205ENST00000480058 RRP9O43818 475 aaKnown RBP7.52□□□□□ -1.21
PRPF4B-205ENST00000480058 ANKRD20A12PQ8NF67 263 aa7.52□□□□□ -1.21
PRPF4B-205ENST00000480058 INTS3Q68E01 1043 aaKnown RBP7.52□□□□□ -1.21
PRPF4B-205ENST00000480058 HFM1A2PYH4 1435 aa7.51□□□□□ -1.21
PRPF4B-205ENST00000480058 HOOK1Q9UJC3 728 aaKnown RBP7.51□□□□□ -1.21
PRPF4B-205ENST00000480058 GNAI1P63096 354 aa7.51□□□□□ -1.21
PRPF4B-205ENST00000480058 RABEP1Q15276 862 aa7.51□□□□□ -1.21
PRPF4B-205ENST00000480058 CCP110O43303 1012 aa7.51□□□□□ -1.21
PRPF4B-205ENST00000480058 CWC22Q9HCG8 908 aaKnown RBP7.51□□□□□ -1.21
PRPF4B-205ENST00000480058 SCAPERQ9BY12 1400 aa7.51□□□□□ -1.21
PRPF4B-205ENST00000480058 PANK3Q9H999 370 aa7.51□□□□□ -1.21
PRPF4B-205ENST00000480058 ANO8Q9HCE9 1232 aaPredicted RBP7.51□□□□□ -1.21
PRPF4B-205ENST00000480058 EVC2Q86UK5 1308 aa7.51□□□□□ -1.21
PRPF4B-205ENST00000480058 NOM1Q5C9Z4 860 aaKnown RBP7.51□□□□□ -1.21
PRPF4B-205ENST00000480058 C22orf23Q9BZE7 217 aa7.51□□□□□ -1.21
PRPF4B-205ENST00000480058 RUNDC1Q96C34 613 aa7.5□□□□□ -1.21
PRPF4B-205ENST00000480058 BACH2Q9BYV9 841 aa7.5□□□□□ -1.21
PRPF4B-205ENST00000480058 NAP1L2Q9ULW6 460 aaPredicted RBP7.5□□□□□ -1.21
PRPF4B-205ENST00000480058 RRBP1Q9P2E9 1410 aaKnown RBP7.5□□□□□ -1.21
PRPF4B-205ENST00000480058 CCDC173Q0VFZ6 552 aa7.5□□□□□ -1.21
PRPF4B-205ENST00000480058 ERCC4Q92889 916 aaPredicted RBP7.49□□□□□ -1.21
PRPF4B-205ENST00000480058 KIF7Q2M1P5 1343 aa7.49□□□□□ -1.21
PRPF4B-205ENST00000480058 FGD6Q6ZV73 1430 aa7.49□□□□□ -1.21
PRPF4B-205ENST00000480058 CRBNQ96SW2 442 aa7.49□□□□□ -1.21
PRPF4B-205ENST00000480058 CDC45O75419 566 aa7.49□□□□□ -1.21
PRPF4B-205ENST00000480058 CWC15Q9P013 229 aaKnown RBP7.49□□□□□ -1.21
PRPF4B-205ENST00000480058 TRIM6-TRIM34B2RNG4 842 aa7.49□□□□□ -1.21
PRPF4B-205ENST00000480058 CALRP27797 417 aaKnown RBP7.49□□□□□ -1.21
PRPF4B-205ENST00000480058 TAF3Q5VWG9 929 aa7.49□□□□□ -1.21
PRPF4B-205ENST00000480058 APAF1O14727 1248 aa7.48□□□□□ -1.21
PRPF4B-205ENST00000480058 CCDC47Q96A33 483 aaKnown RBP7.48□□□□□ -1.21
PRPF4B-205ENST00000480058 HSP90B2PQ58FF3 399 aa7.48□□□□□ -1.21
PRPF4B-205ENST00000480058 GCC1Q96CN9 775 aa7.48□□□□□ -1.21
PRPF4B-205ENST00000480058 KIF2AO00139 706 aaPredicted RBP7.48□□□□□ -1.21
PRPF4B-205ENST00000480058 NAT10Q9H0A0 1025 aaKnown RBP7.48□□□□□ -1.21
PRPF4B-205ENST00000480058 COG6Q9Y2V7 657 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms