RNA–Protein interactions for RNA: ENST00000480054.1

RABGAP1-210, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 423 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-210ENST00000480054 RIMBP2O15034 1052 aa11.3□□□□□ -0.6
RABGAP1-210ENST00000480054 HOXB3P14651 431 aaPredicted RBP11.3□□□□□ -0.6
RABGAP1-210ENST00000480054 IL27Q8NEV9 243 aa11.3□□□□□ -0.6
RABGAP1-210ENST00000480054 POTEB2H3BUK9 544 aa11.29□□□□□ -0.6
RABGAP1-210ENST00000480054 PARP9Q8IXQ6 854 aa11.29□□□□□ -0.6
RABGAP1-210ENST00000480054 DDRGK1Q96HY6 314 aa11.29□□□□□ -0.6
RABGAP1-210ENST00000480054 GPR153Q6NV75 609 aa11.28□□□□□ -0.6
RABGAP1-210ENST00000480054 RBM33Q96EV2 1170 aaKnown RBP11.28□□□□□ -0.6
RABGAP1-210ENST00000480054 SCUBE2Q9NQ36 999 aa11.28□□□□□ -0.6
RABGAP1-210ENST00000480054 TSR1Q2NL82 804 aaKnown RBP11.27□□□□□ -0.61
RABGAP1-210ENST00000480054 ZDHHC16Q969W1 377 aa11.27□□□□□ -0.61
RABGAP1-210ENST00000480054 C6orf132Q5T0Z8 1188 aa11.26□□□□□ -0.61
RABGAP1-210ENST00000480054 FAM117AQ9C073 453 aa11.26□□□□□ -0.61
RABGAP1-210ENST00000480054 RBM27Q9P2N5 1060 aaKnown RBP11.26□□□□□ -0.61
RABGAP1-210ENST00000480054 NUDT7P0C024 238 aa11.24□□□□□ -0.61
RABGAP1-210ENST00000480054 ARSIQ5FYB1 569 aa11.24□□□□□ -0.61
RABGAP1-210ENST00000480054 ZNF454Q8N9F8 522 aa11.23□□□□□ -0.61
RABGAP1-210ENST00000480054 TMUB1Q9BVT8 246 aa11.23□□□□□ -0.61
RABGAP1-210ENST00000480054 PLEKHG3A1L390 1219 aa11.22□□□□□ -0.61
RABGAP1-210ENST00000480054 PSDA5PKW4 1024 aaPredicted RBP11.22□□□□□ -0.61
RABGAP1-210ENST00000480054 C14orf37Q86TY3 774 aa11.22□□□□□ -0.61
RABGAP1-210ENST00000480054 TTC13Q8NBP0 860 aa11.22□□□□□ -0.61
RABGAP1-210ENST00000480054 GOPCQ9HD26 462 aa11.22□□□□□ -0.61
RABGAP1-210ENST00000480054 OATP04181 439 aa11.21□□□□□ -0.61
RABGAP1-210ENST00000480054 TTLL12Q14166 644 aaPredicted RBP11.21□□□□□ -0.61
RABGAP1-210ENST00000480054 CLCN1P35523 988 aa11.2□□□□□ -0.62
RABGAP1-210ENST00000480054 GIGYF2Q6Y7W6 1299 aaKnown RBP11.2□□□□□ -0.62
RABGAP1-210ENST00000480054 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
RABGAP1-210ENST00000480054 KHSRPQ92945 711 aaKnown RBP eCLIP11.19□□□□□ -0.62
RABGAP1-210ENST00000480054 ADAM33Q9BZ11 813 aa11.19□□□□□ -0.62
RABGAP1-210ENST00000480054 SNPHO15079 494 aa11.18□□□□□ -0.62
RABGAP1-210ENST00000480054 GPCPD1Q9NPB8 672 aa11.18□□□□□ -0.62
RABGAP1-210ENST00000480054 REPIN1Q9BWE0 567 aaKnown RBP11.17□□□□□ -0.62
RABGAP1-210ENST00000480054 PADI6Q6TGC4 694 aa11.16□□□□□ -0.62
RABGAP1-210ENST00000480054 METTL3Q86U44 580 aaKnown RBP11.16□□□□□ -0.62
RABGAP1-210ENST00000480054 PHOX2BQ99453 314 aa11.16□□□□□ -0.62
RABGAP1-210ENST00000480054 ADGRG1Q9Y653 693 aa11.16□□□□□ -0.62
RABGAP1-210ENST00000480054 MS4A1P11836 297 aa11.15□□□□□ -0.62
RABGAP1-210ENST00000480054 PRSS12P56730 875 aa11.15□□□□□ -0.62
RABGAP1-210ENST00000480054 PPP4R3BQ5MIZ7 849 aa11.15□□□□□ -0.62
RABGAP1-210ENST00000480054 LHX6Q9UPM6 363 aa11.15□□□□□ -0.62
RABGAP1-210ENST00000480054 PXYLP1Q8TE99 480 aa11.14□□□□□ -0.63
RABGAP1-210ENST00000480054 BCL2L12Q9HB09 334 aa11.14□□□□□ -0.63
RABGAP1-210ENST00000480054 HOXB1P14653 301 aaPredicted RBP11.13□□□□□ -0.63
RABGAP1-210ENST00000480054 MDM2Q00987 491 aaPredicted RBP11.12□□□□□ -0.63
RABGAP1-210ENST00000480054 CDCA7LQ96GN5 454 aa11.12□□□□□ -0.63
RABGAP1-210ENST00000480054 SSTR3P32745 418 aaPredicted RBP11.1□□□□□ -0.63
RABGAP1-210ENST00000480054 RBM46Q8TBY0 533 aaKnown RBP11.09□□□□□ -0.63
RABGAP1-210ENST00000480054 PPP1R3GB7ZBB8 358 aa11.08□□□□□ -0.64
RABGAP1-210ENST00000480054 PTPREP23469 700 aa11.08□□□□□ -0.64
RABGAP1-210ENST00000480054 FAM217BQ9NTX9 383 aaPredicted RBP11.08□□□□□ -0.64
RABGAP1-210ENST00000480054 FAM161AQ3B820 660 aa11.07□□□□□ -0.64
RABGAP1-210ENST00000480054 SH3D19Q5HYK7 790 aa11.07□□□□□ -0.64
RABGAP1-210ENST00000480054 RSPH6AQ9H0K4 717 aa11.06□□□□□ -0.64
RABGAP1-210ENST00000480054 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.05□□□□□ -0.64
RABGAP1-210ENST00000480054 ONECUT3O60422 494 aaPredicted RBP11.05□□□□□ -0.64
RABGAP1-210ENST00000480054 COL9A1P20849 921 aa11.05□□□□□ -0.64
RABGAP1-210ENST00000480054 EYA1Q99502 592 aa11.05□□□□□ -0.64
RABGAP1-210ENST00000480054 SKIV2LQ15477 1246 aaKnown RBP11.03□□□□□ -0.64
RABGAP1-210ENST00000480054 PCMTD1Q96MG8 357 aaPredicted RBP11.03□□□□□ -0.64
RABGAP1-210ENST00000480054 BEGAINQ9BUH8 593 aa11.03□□□□□ -0.64
RABGAP1-210ENST00000480054 FAM198AQ9UFP1 575 aa11.03□□□□□ -0.64
RABGAP1-210ENST00000480054 TRIM6-TRIM34B2RNG4 842 aa11.01□□□□□ -0.65
RABGAP1-210ENST00000480054 OTUD5Q96G74 571 aa11.01□□□□□ -0.65
RABGAP1-210ENST00000480054 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
RABGAP1-210ENST00000480054 RCCD1A6NED2 376 aa10.99□□□□□ -0.65
RABGAP1-210ENST00000480054 FLIIQ13045 1269 aa10.99□□□□□ -0.65
RABGAP1-210ENST00000480054 DIXDC1Q155Q3 683 aa10.99□□□□□ -0.65
RABGAP1-210ENST00000480054 PACS2Q86VP3 889 aa10.99□□□□□ -0.65
RABGAP1-210ENST00000480054 NBPF26B4DH59 902 aa10.98□□□□□ -0.65
RABGAP1-210ENST00000480054 NLRP7Q8WX94 980 aa10.98□□□□□ -0.65
RABGAP1-210ENST00000480054 ZMYND15Q9H091 742 aa10.98□□□□□ -0.65
RABGAP1-210ENST00000480054 TATDN2Q93075 761 aa10.97□□□□□ -0.65
RABGAP1-210ENST00000480054 DNAJB2P25686 324 aa10.96□□□□□ -0.65
RABGAP1-210ENST00000480054 NUDT18Q6ZVK8 323 aa10.96□□□□□ -0.65
RABGAP1-210ENST00000480054 KCNH8Q96L42 1107 aa10.96□□□□□ -0.65
RABGAP1-210ENST00000480054 SULF1Q8IWU6 871 aa10.95□□□□□ -0.66
RABGAP1-210ENST00000480054 SLC4A5Q9BY07 1137 aa10.94□□□□□ -0.66
RABGAP1-210ENST00000480054 TMEM134Q9H6X4 195 aa10.94□□□□□ -0.66
RABGAP1-210ENST00000480054 PNMA3Q9UL41 463 aa10.94□□□□□ -0.66
RABGAP1-210ENST00000480054 CD46P15529 392 aa10.93□□□□□ -0.66
RABGAP1-210ENST00000480054 MYSM1Q5VVJ2 828 aa10.93□□□□□ -0.66
RABGAP1-210ENST00000480054 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.93□□□□□ -0.66
RABGAP1-210ENST00000480054 C3orf80F5H4A9 247 aa10.92□□□□□ -0.66
RABGAP1-210ENST00000480054 KCNK17Q96T54 332 aa10.92□□□□□ -0.66
RABGAP1-210ENST00000480054 ZBED2Q9BTP6 218 aa10.92□□□□□ -0.66
RABGAP1-210ENST00000480054 TBC1D2Q9BYX2 928 aa10.91□□□□□ -0.66
RABGAP1-210ENST00000480054 ARHGAP33O14559 1287 aa10.9□□□□□ -0.66
RABGAP1-210ENST00000480054 TUSC1Q2TAM9 212 aa10.9□□□□□ -0.66
RABGAP1-210ENST00000480054 LHX8Q68G74 356 aa10.9□□□□□ -0.66
RABGAP1-210ENST00000480054 PROX2Q3B8N5 592 aa10.89□□□□□ -0.67
RABGAP1-210ENST00000480054 ARXQ96QS3 562 aa10.89□□□□□ -0.67
RABGAP1-210ENST00000480054 GJA5P36382 358 aa10.88□□□□□ -0.67
RABGAP1-210ENST00000480054 CLK2P49760 499 aaKnown RBP10.88□□□□□ -0.67
RABGAP1-210ENST00000480054 PROCA1Q8NCQ7 364 aaPredicted RBP10.88□□□□□ -0.67
RABGAP1-210ENST00000480054 SPIRE2Q8WWL2 714 aa10.88□□□□□ -0.67
RABGAP1-210ENST00000480054 RABGEF1Q9UJ41 708 aa10.88□□□□□ -0.67
RABGAP1-210ENST00000480054 PBX2P40425 430 aa10.87□□□□□ -0.67
RABGAP1-210ENST00000480054 POLR3EQ9NVU0 708 aa10.87□□□□□ -0.67
RABGAP1-210ENST00000480054 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms