RNA–Protein interactions for RNA: ENST00000479257.5

CALU-203, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 2,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-203ENST00000479257 CERS3Q8IU89 383 aa9.63□□□□□ -0.87
CALU-203ENST00000479257 CABP2Q9NPB3 220 aa9.63□□□□□ -0.87
CALU-203ENST00000479257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.63□□□□□ -0.877e-7■■□□□ 12.7
CALU-203ENST00000479257 PPP1R1BQ9UD71 204 aaPredicted RBP9.63□□□□□ -0.87
CALU-203ENST00000479257 PRIM1P49642 420 aaKnown RBP9.61□□□□□ -0.87
CALU-203ENST00000479257 ZNF662Q6ZS27 426 aa9.6□□□□□ -0.87
CALU-203ENST00000479257 MTMR14Q8NCE2 650 aa9.6□□□□□ -0.87
CALU-203ENST00000479257 TSPYL2Q9H2G4 693 aaPredicted RBP9.6□□□□□ -0.87
CALU-203ENST00000479257 PDAP1Q13442 181 aaKnown RBP9.6□□□□□ -0.87
CALU-203ENST00000479257 ZNF467Q7Z7K2 595 aaPredicted RBP9.6□□□□□ -0.87
CALU-203ENST00000479257 ABL2P42684 1182 aa9.59□□□□□ -0.87
CALU-203ENST00000479257 PSEN1P49768 467 aa9.59□□□□□ -0.87
CALU-203ENST00000479257 SH3D19Q5HYK7 790 aa9.59□□□□□ -0.87
CALU-203ENST00000479257 TBC1D2BQ9UPU7 963 aa9.59□□□□□ -0.87
CALU-203ENST00000479257 SIRT1Q96EB6 747 aa9.58□□□□□ -0.88
CALU-203ENST00000479257 PDE4AP27815 886 aa9.57□□□□□ -0.88
CALU-203ENST00000479257 CFAP70Q5T0N1 1121 aa9.57□□□□□ -0.88
CALU-203ENST00000479257 SRPK2P78362 688 aaKnown RBP9.57□□□□□ -0.88
CALU-203ENST00000479257 ZNF526Q8TF50 670 aaPredicted RBP9.57□□□□□ -0.88
CALU-203ENST00000479257 TAGLNQ01995 201 aaKnown RBP9.56□□□□□ -0.88
CALU-203ENST00000479257 KCNA1Q09470 495 aa9.56□□□□□ -0.88
CALU-203ENST00000479257 ZNF592Q92610 1267 aa9.56□□□□□ -0.88
CALU-203ENST00000479257 GNPATO15228 680 aa9.56□□□□□ -0.88
CALU-203ENST00000479257 FAM161AQ3B820 660 aa9.56□□□□□ -0.88
CALU-203ENST00000479257 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.56□□□□□ -0.88
CALU-203ENST00000479257 ACIN1Q9UKV3 1341 aaKnown RBP9.55□□□□□ -0.88
CALU-203ENST00000479257 SCNN1AP37088 669 aa9.55□□□□□ -0.88
CALU-203ENST00000479257 FARP1Q9Y4F1 1045 aaPredicted RBP9.55□□□□□ -0.88
CALU-203ENST00000479257 PPP1R15AO75807 674 aaPredicted RBP9.54□□□□□ -0.88
CALU-203ENST00000479257 PDIA6Q15084 440 aa9.54□□□□□ -0.88
CALU-203ENST00000479257 PBXIP1Q96AQ6 731 aa9.54□□□□□ -0.88
CALU-203ENST00000479257 MDM2Q00987 491 aaPredicted RBP9.53□□□□□ -0.88
CALU-203ENST00000479257 ABCC9O60706 1549 aa9.53□□□□□ -0.88
CALU-203ENST00000479257 CADPSQ9ULU8 1353 aa9.53□□□□□ -0.88
CALU-203ENST00000479257 TMEM88BA6NKF7 163 aa9.52□□□□□ -0.89
CALU-203ENST00000479257 GIMAP6Q6P9H5 292 aa9.52□□□□□ -0.89
CALU-203ENST00000479257 POTEDQ86YR6 584 aa9.52□□□□□ -0.89
CALU-203ENST00000479257 BEGAINQ9BUH8 593 aa9.52□□□□□ -0.89
CALU-203ENST00000479257 SPDYE5A6NIY4 337 aa9.52□□□□□ -0.89
CALU-203ENST00000479257 RBM47A0AV96 593 aaKnown RBP9.51□□□□□ -0.89
CALU-203ENST00000479257 TBC1D12O60347 775 aa9.51□□□□□ -0.89
CALU-203ENST00000479257 CLEC11AQ9Y240 323 aa9.51□□□□□ -0.89
CALU-203ENST00000479257 RFC5P40937 340 aa9.51□□□□□ -0.89
CALU-203ENST00000479257 ZNF16P17020 682 aaPredicted RBP9.5□□□□□ -0.89
CALU-203ENST00000479257 PPP1R15BQ5SWA1 713 aa9.5□□□□□ -0.89
CALU-203ENST00000479257 ARID4BQ4LE39 1312 aaPredicted RBP9.5□□□□□ -0.89
CALU-203ENST00000479257 DSG3P32926 999 aa9.5□□□□□ -0.89
CALU-203ENST00000479257 HDGFL1Q5TGJ6 251 aa9.49□□□□□ -0.89
CALU-203ENST00000479257 MYSM1Q5VVJ2 828 aa9.49□□□□□ -0.89
CALU-203ENST00000479257 DNAJC14Q6Y2X3 702 aaPredicted RBP9.49□□□□□ -0.89
CALU-203ENST00000479257 SPATA32Q96LK8 384 aa9.49□□□□□ -0.89
CALU-203ENST00000479257 OSBPP22059 807 aa9.48□□□□□ -0.89
CALU-203ENST00000479257 NLRP6P59044 892 aa9.48□□□□□ -0.89
CALU-203ENST00000479257 DDX12PQ92771 950 aa9.48□□□□□ -0.89
CALU-203ENST00000479257 PDE4CQ08493 712 aa9.47□□□□□ -0.89
CALU-203ENST00000479257 DSG2Q14126 1118 aa9.46□□□□□ -0.89
CALU-203ENST00000479257 IFNL1Q8IU54 200 aa9.46□□□□□ -0.89
CALU-203ENST00000479257 LIMD1Q9UGP4 676 aa9.46□□□□□ -0.9
CALU-203ENST00000479257 TCF3P15923 654 aa9.45□□□□□ -0.9
CALU-203ENST00000479257 SSTR3P32745 418 aaPredicted RBP9.45□□□□□ -0.9
CALU-203ENST00000479257 CSB-PGBD3P0DP91 1061 aa9.45□□□□□ -0.9
CALU-203ENST00000479257 VRTNQ9H8Y1 702 aa9.44□□□□□ -0.9
CALU-203ENST00000479257 GIPC2Q8TF65 315 aa9.44□□□□□ -0.9
CALU-203ENST00000479257 FOSBP53539 338 aa9.43□□□□□ -0.9
CALU-203ENST00000479257 TMUB1Q9BVT8 246 aa9.43□□□□□ -0.9
CALU-203ENST00000479257 UCN2Q96RP3 112 aa9.43□□□□□ -0.9
CALU-203ENST00000479257 HIC1Q14526 733 aa9.42□□□□□ -0.9
CALU-203ENST00000479257 CSPP1Q1MSJ5 1256 aa9.42□□□□□ -0.9
CALU-203ENST00000479257 PHLDB3Q6NSJ2 640 aa9.42□□□□□ -0.9
CALU-203ENST00000479257 GPR37L1O60883 481 aa9.41□□□□□ -0.9
CALU-203ENST00000479257 LMOD1P29536 600 aaPredicted RBP9.41□□□□□ -0.9
CALU-203ENST00000479257 USTQ9Y2C2 406 aa9.41□□□□□ -0.9
CALU-203ENST00000479257 RNF39Q9H2S5 420 aa9.41□□□□□ -0.9
CALU-203ENST00000479257 CDHR5Q9HBB8 845 aa9.41□□□□□ -0.9
CALU-203ENST00000479257 C9orf131Q5VYM1 1079 aa9.4□□□□□ -0.9
CALU-203ENST00000479257 PALM3A6NDB9 673 aaPredicted RBP9.39□□□□□ -0.91
CALU-203ENST00000479257 PTGDRQ13258 359 aa9.39□□□□□ -0.91
CALU-203ENST00000479257 PPP1R12CQ9BZL4 782 aa9.39□□□□□ -0.91
CALU-203ENST00000479257 PRDM16Q9HAZ2 1276 aa9.39□□□□□ -0.91
CALU-203ENST00000479257 QPCTQ16769 361 aa9.39□□□□□ -0.91
CALU-203ENST00000479257 DRC1Q96MC2 740 aa9.38□□□□□ -0.91
CALU-203ENST00000479257 ANKRD62A6NC57 917 aa9.38□□□□□ -0.91
CALU-203ENST00000479257 CLK2P49760 499 aaKnown RBP9.38□□□□□ -0.91
CALU-203ENST00000479257 STK32AQ8WU08 396 aa9.38□□□□□ -0.91
CALU-203ENST00000479257 BCL2L13Q9BXK5 485 aa9.38□□□□□ -0.91
CALU-203ENST00000479257 PRR29P0C7W0 189 aa9.37□□□□□ -0.91
CALU-203ENST00000479257 VAC14Q08AM6 782 aa9.37□□□□□ -0.91
CALU-203ENST00000479257 SREK1Q8WXA9 508 aaKnown RBP9.37□□□□□ -0.91
CALU-203ENST00000479257 SLAIN2Q9P270 581 aa9.37□□□□□ -0.91
CALU-203ENST00000479257 SERPINB4P48594 390 aa9.37□□□□□ -0.91
CALU-203ENST00000479257 MARCH6O60337 910 aa9.36□□□□□ -0.91
CALU-203ENST00000479257 GPCPD1Q9NPB8 672 aa9.35□□□□□ -0.91
CALU-203ENST00000479257 TFIP11Q9UBB9 837 aaKnown RBP9.35□□□□□ -0.91
CALU-203ENST00000479257 DNAJC2Q99543 621 aaKnown RBP9.35□□□□□ -0.91
CALU-203ENST00000479257 CHADLQ6NUI6 762 aa9.34□□□□□ -0.91
CALU-203ENST00000479257 UPF1Q92900 1129 aaKnown RBP eCLIP9.34□□□□□ -0.918e-26■■■■■ 27.3
CALU-203ENST00000479257 GPATCH3Q96I76 525 aa9.34□□□□□ -0.91
CALU-203ENST00000479257 GPHNQ9NQX3 736 aaPredicted RBP9.34□□□□□ -0.91
CALU-203ENST00000479257 FCHSD2O94868 740 aa9.34□□□□□ -0.91
CALU-203ENST00000479257 VTI1AQ96AJ9 217 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms