RNA–Protein interactions for RNA: ENST00000477100.1

TRBVB-201, Transcript of T cell receptor beta variable B (pseudogene), humanhuman

BASIC

Gene TRBVB, Length 408 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVB-201ENST00000477100 FBXW7Q969H0 707 aa7.28□□□□□ -1.24
TRBVB-201ENST00000477100 ANKK1Q8NFD2 765 aa7.26□□□□□ -1.25
TRBVB-201ENST00000477100 CAMK2BQ13554 666 aa7.25□□□□□ -1.25
TRBVB-201ENST00000477100 LAPTM4BQ86VI4 370 aa7.25□□□□□ -1.25
TRBVB-201ENST00000477100 ITGBL1O95965 494 aaPredicted RBP7.24□□□□□ -1.25
TRBVB-201ENST00000477100 DCAF8L2P0C7V8 631 aa7.24□□□□□ -1.25
TRBVB-201ENST00000477100 EPAS1Q99814 870 aa7.24□□□□□ -1.25
TRBVB-201ENST00000477100 SOWAHBA6NEL2 793 aa7.23□□□□□ -1.25
TRBVB-201ENST00000477100 ONECUT3O60422 494 aaPredicted RBP7.23□□□□□ -1.25
TRBVB-201ENST00000477100 BCAMP50895 628 aa7.23□□□□□ -1.25
TRBVB-201ENST00000477100 IRX2Q9BZI1 471 aaPredicted RBP7.23□□□□□ -1.25
TRBVB-201ENST00000477100 KIAA1468Q9P260 1216 aa7.23□□□□□ -1.25
TRBVB-201ENST00000477100 C6orf132Q5T0Z8 1188 aa7.22□□□□□ -1.25
TRBVB-201ENST00000477100 NYAP1Q6ZVC0 841 aa7.21□□□□□ -1.26
TRBVB-201ENST00000477100 ZFRQ96KR1 1074 aaKnown RBP7.21□□□□□ -1.26
TRBVB-201ENST00000477100 DPYSL4O14531 572 aa7.2□□□□□ -1.26
TRBVB-201ENST00000477100 TRIM6-TRIM34B2RNG4 842 aa7.19□□□□□ -1.26
TRBVB-201ENST00000477100 SEPT9Q9UHD8 586 aaPredicted RBP7.19□□□□□ -1.26
TRBVB-201ENST00000477100 WBP1LQ9NX94 342 aa7.18□□□□□ -1.26
TRBVB-201ENST00000477100 FAM98CQ17RN3 349 aaKnown RBP7.17□□□□□ -1.26
TRBVB-201ENST00000477100 DDX12PQ92771 950 aa7.16□□□□□ -1.26
TRBVB-201ENST00000477100 RBM33Q96EV2 1170 aaKnown RBP7.16□□□□□ -1.26
TRBVB-201ENST00000477100 KCNC4Q03721 635 aa7.14□□□□□ -1.27
TRBVB-201ENST00000477100 EN1Q05925 392 aaPredicted RBP7.14□□□□□ -1.27
TRBVB-201ENST00000477100 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.14□□□□□ -1.27
TRBVB-201ENST00000477100 TSR3Q9UJK0 312 aaKnown RBP7.14□□□□□ -1.27
TRBVB-201ENST00000477100 PDIA6Q15084 440 aa7.13□□□□□ -1.27
TRBVB-201ENST00000477100 LRCH3Q96II8 777 aa7.13□□□□□ -1.27
TRBVB-201ENST00000477100 TSKSQ9UJT2 592 aa7.13□□□□□ -1.27
TRBVB-201ENST00000477100 HPS5Q9UPZ3 1129 aa7.13□□□□□ -1.27
TRBVB-201ENST00000477100 NBR1Q14596 966 aa7.12□□□□□ -1.27
TRBVB-201ENST00000477100 TSR1Q2NL82 804 aaKnown RBP7.12□□□□□ -1.27
TRBVB-201ENST00000477100 MAP3K7O43318 606 aa7.11□□□□□ -1.27
TRBVB-201ENST00000477100 PACS2Q86VP3 889 aa7.11□□□□□ -1.27
TRBVB-201ENST00000477100 BBXQ8WY36 941 aaPredicted RBP7.11□□□□□ -1.27
TRBVB-201ENST00000477100 SPDYE16A6NNV3 312 aaPredicted RBP7.1□□□□□ -1.27
TRBVB-201ENST00000477100 PRSS12P56730 875 aa7.07□□□□□ -1.28
TRBVB-201ENST00000477100 CDCA7LQ96GN5 454 aa7.07□□□□□ -1.28
TRBVB-201ENST00000477100 FAM198AQ9UFP1 575 aa7.07□□□□□ -1.28
TRBVB-201ENST00000477100 PRIM1P49642 420 aaKnown RBP7.06□□□□□ -1.28
TRBVB-201ENST00000477100 PPP4CP60510 307 aa7.06□□□□□ -1.28
TRBVB-201ENST00000477100 Q6ZNB5 142 aa7.06□□□□□ -1.28
TRBVB-201ENST00000477100 ARIH1Q9Y4X5 557 aaPredicted RBP7.06□□□□□ -1.28
TRBVB-201ENST00000477100 SMAPO00193 183 aa7.05□□□□□ -1.28
TRBVB-201ENST00000477100 TJAP1Q5JTD0 557 aa7.05□□□□□ -1.28
TRBVB-201ENST00000477100 SAMD7Q7Z3H4 446 aa7.05□□□□□ -1.28
TRBVB-201ENST00000477100 CERKQ8TCT0 537 aa7.05□□□□□ -1.28
TRBVB-201ENST00000477100 C3orf80F5H4A9 247 aa7.04□□□□□ -1.28
TRBVB-201ENST00000477100 E2F4Q16254 413 aa7.04□□□□□ -1.28
TRBVB-201ENST00000477100 NBPF26B4DH59 902 aa7.03□□□□□ -1.28
TRBVB-201ENST00000477100 LAPTM4AQ15012 233 aa7.03□□□□□ -1.28
TRBVB-201ENST00000477100 SPRYD3Q8NCJ5 442 aa7.03□□□□□ -1.28
TRBVB-201ENST00000477100 TATDN2Q93075 761 aa7.03□□□□□ -1.28
TRBVB-201ENST00000477100 PNMA3Q9UL41 463 aa7.02□□□□□ -1.29
TRBVB-201ENST00000477100 GRXCR2A6NFK2 248 aa7.01□□□□□ -1.29
TRBVB-201ENST00000477100 OSBPP22059 807 aa7.01□□□□□ -1.29
TRBVB-201ENST00000477100 MTRQ99707 1265 aa7.01□□□□□ -1.29
TRBVB-201ENST00000477100 CDHR5Q9HBB8 845 aa7.01□□□□□ -1.29
TRBVB-201ENST00000477100 IL21Q9HBE4 155 aa7.01□□□□□ -1.29
TRBVB-201ENST00000477100 RBM27Q9P2N5 1060 aaKnown RBP7.01□□□□□ -1.29
TRBVB-201ENST00000477100 LCE2BO14633 110 aa7□□□□□ -1.29
TRBVB-201ENST00000477100 NUDT18Q6ZVK8 323 aa6.99□□□□□ -1.29
TRBVB-201ENST00000477100 GFRA3O60609 400 aa6.98□□□□□ -1.29
TRBVB-201ENST00000477100 PPP1R18Q6NYC8 613 aa6.98□□□□□ -1.29
TRBVB-201ENST00000477100 PRKD2Q9BZL6 878 aa6.98□□□□□ -1.29
TRBVB-201ENST00000477100 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.98□□□□□ -1.29
TRBVB-201ENST00000477100 APLP1P51693 650 aa6.97□□□□□ -1.29
TRBVB-201ENST00000477100 TTC13Q8NBP0 860 aa6.97□□□□□ -1.29
TRBVB-201ENST00000477100 ZNF516Q92618 1163 aa6.97□□□□□ -1.29
TRBVB-201ENST00000477100 WDR70Q9NW82 654 aa6.97□□□□□ -1.29
TRBVB-201ENST00000477100 RNF40O75150 1001 aa6.96□□□□□ -1.3
TRBVB-201ENST00000477100 V9GY48 417 aaPredicted RBP6.96□□□□□ -1.3
TRBVB-201ENST00000477100 NRG2O14511 850 aaPredicted RBP6.95□□□□□ -1.3
TRBVB-201ENST00000477100 HDGFP51858 240 aaKnown RBP6.95□□□□□ -1.3
TRBVB-201ENST00000477100 TRAF7Q6Q0C0 670 aa6.95□□□□□ -1.3
TRBVB-201ENST00000477100 NECTIN2Q92692 538 aa6.95□□□□□ -1.3
TRBVB-201ENST00000477100 NPDC1Q9NQX5 325 aaPredicted RBP6.95□□□□□ -1.3
TRBVB-201ENST00000477100 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.95□□□□□ -1.3
TRBVB-201ENST00000477100 PADI6Q6TGC4 694 aa6.94□□□□□ -1.3
TRBVB-201ENST00000477100 SWT1Q5T5J6 900 aaKnown RBP6.93□□□□□ -1.3
TRBVB-201ENST00000477100 PAXIP1Q6ZW49 1069 aaPredicted RBP6.93□□□□□ -1.3
TRBVB-201ENST00000477100 NKX2-3Q8TAU0 364 aa6.93□□□□□ -1.3
TRBVB-201ENST00000477100 SLF2Q8IX21 1173 aa6.92□□□□□ -1.3
TRBVB-201ENST00000477100 CFAP44Q96MT7 982 aa6.92□□□□□ -1.3
TRBVB-201ENST00000477100 COPS2P61201 443 aa6.9□□□□□ -1.3
TRBVB-201ENST00000477100 EYA1Q99502 592 aa6.9□□□□□ -1.3
TRBVB-201ENST00000477100 GGCXP38435 758 aa6.89□□□□□ -1.31
TRBVB-201ENST00000477100 TMUB1Q9BVT8 246 aa6.88□□□□□ -1.31
TRBVB-201ENST00000477100 ZPR1O75312 459 aa6.87□□□□□ -1.31
TRBVB-201ENST00000477100 SLC4A3P48751 1232 aa6.87□□□□□ -1.31
TRBVB-201ENST00000477100 PRR14Q9BWN1 585 aa6.87□□□□□ -1.31
TRBVB-201ENST00000477100 PDZRN3Q9UPQ7 1066 aa6.87□□□□□ -1.31
TRBVB-201ENST00000477100 AMER1Q5JTC6 1135 aaPredicted RBP6.86□□□□□ -1.31
TRBVB-201ENST00000477100 PCDHB3Q9Y5E6 796 aa6.85□□□□□ -1.31
TRBVB-201ENST00000477100 MLLT3P42568 568 aaPredicted RBP6.84□□□□□ -1.31
TRBVB-201ENST00000477100 DNAJB2P25686 324 aa6.83□□□□□ -1.32
TRBVB-201ENST00000477100 PTGDRQ13258 359 aa6.83□□□□□ -1.32
TRBVB-201ENST00000477100 BLOC1S3Q6QNY0 202 aa6.83□□□□□ -1.32
TRBVB-201ENST00000477100 ARHGEF1Q92888 912 aaKnown RBP6.83□□□□□ -1.32
TRBVB-201ENST00000477100 RNF223E7ERA6 249 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms