RNA–Protein interactions for RNA: ENST00000476556.5

RERE-212, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 1 (best) BASIC

Gene RERE, Length 4,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-212ENST00000476556 POGKQ9P215 609 aa16.74■□□□□ 0.27
RERE-212ENST00000476556 RRP7AQ9Y3A4 280 aaKnown RBP16.74■□□□□ 0.27
RERE-212ENST00000476556 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
RERE-212ENST00000476556 EFCAB2Q5VUJ9 269 aa16.73■□□□□ 0.27
RERE-212ENST00000476556 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
RERE-212ENST00000476556 COG6Q9Y2V7 657 aa16.72■□□□□ 0.27
RERE-212ENST00000476556 NFKBIBQ15653 356 aa16.72■□□□□ 0.27
RERE-212ENST00000476556 BCL2L13Q9BXK5 485 aa16.72■□□□□ 0.27
RERE-212ENST00000476556 MIA2Q96PC5 1412 aa16.72■□□□□ 0.27
RERE-212ENST00000476556 EIF3AQ14152 1382 aaKnown RBP16.72■□□□□ 0.27
RERE-212ENST00000476556 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
RERE-212ENST00000476556 SRPK2P78362 688 aaKnown RBP16.71■□□□□ 0.27
RERE-212ENST00000476556 AQRO60306 1485 aaKnown RBP eCLIP16.7■□□□□ 0.264e-7■■■■■ 30.1
RERE-212ENST00000476556 E9PSI1 815 aa16.7■□□□□ 0.26
RERE-212ENST00000476556 BACH2Q9BYV9 841 aa16.7■□□□□ 0.26
RERE-212ENST00000476556 ADAMTS8Q9UP79 889 aa16.7■□□□□ 0.26
RERE-212ENST00000476556 CASC1Q6TDU7 716 aa16.7■□□□□ 0.26
RERE-212ENST00000476556 GOLGA6L3A6NEY3 463 aa16.69■□□□□ 0.26
RERE-212ENST00000476556 CHMP4BQ9H444 224 aaKnown RBP16.69■□□□□ 0.26
RERE-212ENST00000476556 TOPBP1Q92547 1522 aa16.69■□□□□ 0.26
RERE-212ENST00000476556 SMC4Q9NTJ3 1288 aa16.69■□□□□ 0.26
RERE-212ENST00000476556 IL27Q8NEV9 243 aa16.69■□□□□ 0.26
RERE-212ENST00000476556 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
RERE-212ENST00000476556 CGNL1Q0VF96 1302 aa16.68■□□□□ 0.26
RERE-212ENST00000476556 PTMAP06454 111 aaKnown RBP16.68■□□□□ 0.26
RERE-212ENST00000476556 KIF3BO15066 747 aa16.68■□□□□ 0.26
RERE-212ENST00000476556 SUPT6HQ7KZ85 1726 aaKnown RBP16.68■□□□□ 0.26
RERE-212ENST00000476556 KIAA1107Q9UPP5 1409 aa16.68■□□□□ 0.26
RERE-212ENST00000476556 NESP48681 1621 aa16.68■□□□□ 0.26
RERE-212ENST00000476556 TPRNQ4KMQ1 711 aa16.67■□□□□ 0.26
RERE-212ENST00000476556 NBPF1Q3BBV0 1214 aa16.67■□□□□ 0.26
RERE-212ENST00000476556 GGT6Q6P531 493 aa16.66■□□□□ 0.26
RERE-212ENST00000476556 NCOA1Q15788 1441 aa16.66■□□□□ 0.26
RERE-212ENST00000476556 IPO8O15397 1037 aaKnown RBP16.66■□□□□ 0.26
RERE-212ENST00000476556 ANKRD30BQ9BXX2 1392 aa16.66■□□□□ 0.26
RERE-212ENST00000476556 DAPK1P53355 1430 aa16.65■□□□□ 0.26
RERE-212ENST00000476556 PRDM2Q13029 1718 aa16.65■□□□□ 0.26
RERE-212ENST00000476556 STK26Q9P289 416 aa16.65■□□□□ 0.26
RERE-212ENST00000476556 SPAG9O60271 1321 aaKnown RBP16.64■□□□□ 0.25
RERE-212ENST00000476556 PLPPR3Q6T4P5 718 aa16.64■□□□□ 0.25
RERE-212ENST00000476556 GBP4Q96PP9 640 aa16.64■□□□□ 0.25
RERE-212ENST00000476556 PTPRKQ15262 1439 aa16.63■□□□□ 0.25
RERE-212ENST00000476556 PTPN23Q9H3S7 1636 aa16.63■□□□□ 0.25
RERE-212ENST00000476556 TRAK1Q9UPV9 953 aa16.62■□□□□ 0.25
RERE-212ENST00000476556 DNTTIP2Q5QJE6 756 aaKnown RBP16.62■□□□□ 0.25
RERE-212ENST00000476556 BRPF3Q9ULD4 1205 aa16.62■□□□□ 0.25
RERE-212ENST00000476556 CDK13Q14004 1512 aaKnown RBP16.61■□□□□ 0.25
RERE-212ENST00000476556 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
RERE-212ENST00000476556 UNC13AQ9UPW8 1703 aa16.6■□□□□ 0.25
RERE-212ENST00000476556 APBB1O00213 710 aa16.59■□□□□ 0.25
RERE-212ENST00000476556 FOXD4L1Q9NU39 408 aa16.59■□□□□ 0.25
RERE-212ENST00000476556 EPRSP07814 1512 aaKnown RBP16.59■□□□□ 0.25
RERE-212ENST00000476556 PRG4Q92954 1404 aaPredicted RBP16.59■□□□□ 0.25
RERE-212ENST00000476556 MSNP26038 577 aaKnown RBP16.59■□□□□ 0.25
RERE-212ENST00000476556 SKAP1Q86WV1 359 aa16.59■□□□□ 0.25
RERE-212ENST00000476556 PANK1Q8TE04 598 aa16.58■□□□□ 0.25
RERE-212ENST00000476556 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.25
RERE-212ENST00000476556 HECW1Q76N89 1606 aa16.58■□□□□ 0.24
RERE-212ENST00000476556 PPP2R1AP30153 589 aa16.58■□□□□ 0.24
RERE-212ENST00000476556 ANO8Q9HCE9 1232 aaPredicted RBP16.58■□□□□ 0.24
RERE-212ENST00000476556 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.24
RERE-212ENST00000476556 PTPRGP23470 1445 aa16.57■□□□□ 0.24
RERE-212ENST00000476556 ROCK1Q13464 1354 aa16.57■□□□□ 0.24
RERE-212ENST00000476556 NUTM2DQ5VT03 806 aaPredicted RBP16.57■□□□□ 0.24
RERE-212ENST00000476556 WASHC2CQ9Y4E1 1318 aa16.56■□□□□ 0.24
RERE-212ENST00000476556 ZKSCAN2Q63HK3 967 aa16.56■□□□□ 0.24
RERE-212ENST00000476556 RSPH6AQ9H0K4 717 aa16.56■□□□□ 0.24
RERE-212ENST00000476556 PLCB2Q00722 1185 aa16.55■□□□□ 0.24
RERE-212ENST00000476556 RPRD2Q5VT52 1461 aaKnown RBP16.55■□□□□ 0.24
RERE-212ENST00000476556 HDGFL2Q7Z4V5 671 aaPredicted RBP16.54■□□□□ 0.24
RERE-212ENST00000476556 NGEFQ8N5V2 710 aa16.53■□□□□ 0.24
RERE-212ENST00000476556 TROQ12816 1431 aaPredicted RBP16.53■□□□□ 0.24
RERE-212ENST00000476556 GRIN2BQ13224 1484 aa16.53■□□□□ 0.24
RERE-212ENST00000476556 ABCC5O15440 1437 aa16.53■□□□□ 0.24
RERE-212ENST00000476556 C9orf84Q5VXU9 1444 aa16.53■□□□□ 0.24
RERE-212ENST00000476556 BCAR3O75815 825 aa16.52■□□□□ 0.24
RERE-212ENST00000476556 PTMSP20962 102 aa16.51■□□□□ 0.23
RERE-212ENST00000476556 DDX11L8A8MPP1 907 aa16.51■□□□□ 0.23
RERE-212ENST00000476556 C20orf194Q5TEA3 1177 aa16.5■□□□□ 0.23
RERE-212ENST00000476556 C14orf37Q86TY3 774 aa16.5■□□□□ 0.23
RERE-212ENST00000476556 SOX12O15370 315 aa16.49■□□□□ 0.23
RERE-212ENST00000476556 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
RERE-212ENST00000476556 DZIP1LQ8IYY4 767 aaKnown RBP16.49■□□□□ 0.23
RERE-212ENST00000476556 RUNDC1Q96C34 613 aa16.49■□□□□ 0.23
RERE-212ENST00000476556 CFAP44Q96MT7 982 aa16.49■□□□□ 0.23
RERE-212ENST00000476556 ZBTB7CA1YPR0 619 aa16.48■□□□□ 0.23
RERE-212ENST00000476556 CALD1Q05682 793 aaKnown RBP16.48■□□□□ 0.23
RERE-212ENST00000476556 TERF2IPQ9NYB0 399 aa16.48■□□□□ 0.23
RERE-212ENST00000476556 CHMP5Q9NZZ3 219 aa16.48■□□□□ 0.23
RERE-212ENST00000476556 CUL7Q14999 1698 aa16.47■□□□□ 0.23
RERE-212ENST00000476556 ELL2O00472 640 aaPredicted RBP16.47■□□□□ 0.23
RERE-212ENST00000476556 ANKRD45Q5TZF3 282 aa16.47■□□□□ 0.23
RERE-212ENST00000476556 DDX19BQ9UMR2 479 aa16.45■□□□□ 0.22
RERE-212ENST00000476556 C22orf23Q9BZE7 217 aa16.45■□□□□ 0.22
RERE-212ENST00000476556 HAP1P54257 671 aaPredicted RBP16.45■□□□□ 0.22
RERE-212ENST00000476556 ERBINQ96RT1 1412 aa16.44■□□□□ 0.22
RERE-212ENST00000476556 MCCP23508 829 aa16.44■□□□□ 0.22
RERE-212ENST00000476556 TCP11L2Q8N4U5 519 aa16.44■□□□□ 0.22
RERE-212ENST00000476556 CC2D2AQ9P2K1 1620 aa16.44■□□□□ 0.22
RERE-212ENST00000476556 PDE3AQ14432 1141 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 659 ms