RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 KDM5CP41229 1560 aa17.16■□□□□ 0.34
RNF220-211ENST00000474956 ST20-MTHFSA0A0A6YYL1 179 aa17.16■□□□□ 0.34
RNF220-211ENST00000474956 NBPF1Q3BBV0 1214 aa17.15■□□□□ 0.34
RNF220-211ENST00000474956 EFCAB2Q5VUJ9 269 aa17.14■□□□□ 0.33
RNF220-211ENST00000474956 RSPH4AQ5TD94 716 aa17.13■□□□□ 0.33
RNF220-211ENST00000474956 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
RNF220-211ENST00000474956 RBM19Q9Y4C8 960 aaKnown RBP17.13■□□□□ 0.33
RNF220-211ENST00000474956 IRX6P78412 446 aaPredicted RBP17.13■□□□□ 0.33
RNF220-211ENST00000474956 CCDC144AA2RUR9 1427 aa17.11■□□□□ 0.33
RNF220-211ENST00000474956 MAST1Q9Y2H9 1570 aa17.11■□□□□ 0.33
RNF220-211ENST00000474956 ABCC1P33527 1531 aa17.11■□□□□ 0.33
RNF220-211ENST00000474956 UHRF1BP1LA0JNW5 1464 aa17.11■□□□□ 0.33
RNF220-211ENST00000474956 POLR1AO95602 1720 aaPredicted RBP17.1■□□□□ 0.33
RNF220-211ENST00000474956 RALGAPBQ86X10 1494 aa17.1■□□□□ 0.33
RNF220-211ENST00000474956 UHRF1BP1Q6BDS2 1440 aa17.1■□□□□ 0.33
RNF220-211ENST00000474956 DHX29Q7Z478 1369 aaKnown RBP17.1■□□□□ 0.33
RNF220-211ENST00000474956 UNC13BO14795 1591 aa17.1■□□□□ 0.33
RNF220-211ENST00000474956 ROCK2O75116 1388 aaKnown RBP17.09■□□□□ 0.33
RNF220-211ENST00000474956 PLXNC1O60486 1568 aa17.08■□□□□ 0.32
RNF220-211ENST00000474956 MYT1LQ9UL68 1186 aa17.08■□□□□ 0.32
RNF220-211ENST00000474956 SPAG9O60271 1321 aaKnown RBP17.07■□□□□ 0.32
RNF220-211ENST00000474956 A2MP01023 1474 aa17.07■□□□□ 0.32
RNF220-211ENST00000474956 DUOX2Q9NRD8 1548 aa17.06■□□□□ 0.32
RNF220-211ENST00000474956 IQGAP3Q86VI3 1631 aa17.04■□□□□ 0.32
RNF220-211ENST00000474956 WDR7Q9Y4E6 1490 aa17.04■□□□□ 0.32
RNF220-211ENST00000474956 PRAG1Q86YV5 1406 aa17.04■□□□□ 0.32
RNF220-211ENST00000474956 FANCAO15360 1455 aa17.02■□□□□ 0.32
RNF220-211ENST00000474956 ASXL2Q76L83 1435 aa17.01■□□□□ 0.31
RNF220-211ENST00000474956 ZFYVE16Q7Z3T8 1539 aa17.01■□□□□ 0.31
RNF220-211ENST00000474956 SCAPERQ9BY12 1400 aa17.01■□□□□ 0.31
RNF220-211ENST00000474956 TRPM1Q7Z4N2 1603 aa17.01■□□□□ 0.31
RNF220-211ENST00000474956 ERBINQ96RT1 1412 aa17■□□□□ 0.31
RNF220-211ENST00000474956 MAGI2Q86UL8 1455 aa16.99■□□□□ 0.31
RNF220-211ENST00000474956 KIF3BO15066 747 aa16.98■□□□□ 0.31
RNF220-211ENST00000474956 E9PCH4 1651 aa16.98■□□□□ 0.31
RNF220-211ENST00000474956 ADGRL1O94910 1474 aa16.96■□□□□ 0.31
RNF220-211ENST00000474956 DISP3Q9P2K9 1392 aa16.96■□□□□ 0.31
RNF220-211ENST00000474956 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
RNF220-211ENST00000474956 ERICH6BQ5W0A0 696 aa16.95■□□□□ 0.3
RNF220-211ENST00000474956 ABCA9Q8IUA7 1624 aa16.95■□□□□ 0.3
RNF220-211ENST00000474956 UGGT1Q9NYU2 1555 aa16.94■□□□□ 0.3
RNF220-211ENST00000474956 ATP7AQ04656 1500 aa16.93■□□□□ 0.3
RNF220-211ENST00000474956 ATP10AO60312 1499 aa16.93■□□□□ 0.3
RNF220-211ENST00000474956 TESK2Q96S53 571 aa16.93■□□□□ 0.3
RNF220-211ENST00000474956 FANCIQ9NVI1 1328 aa16.92■□□□□ 0.3
RNF220-211ENST00000474956 INO80Q9ULG1 1556 aaPredicted RBP16.9■□□□□ 0.3
RNF220-211ENST00000474956 CLTCL1P53675 1640 aa16.89■□□□□ 0.29
RNF220-211ENST00000474956 CFAP65Q6ZU64 1925 aaKnown RBP16.89■□□□□ 0.29
RNF220-211ENST00000474956 RTEL1-TNFRSF6BF6WH68 1400 aa16.88■□□□□ 0.29
RNF220-211ENST00000474956 CC2D1BQ5T0F9 858 aaKnown RBP16.88■□□□□ 0.29
RNF220-211ENST00000474956 BCL11AQ9H165 835 aa16.88■□□□□ 0.29
RNF220-211ENST00000474956 MSH5O43196 834 aa16.88■□□□□ 0.29
RNF220-211ENST00000474956 SALL2Q9Y467 1007 aaPredicted RBP16.88■□□□□ 0.29
RNF220-211ENST00000474956 GPRASP1Q5JY77 1395 aa16.88■□□□□ 0.29
RNF220-211ENST00000474956 ZBED9Q6R2W3 1325 aa16.87■□□□□ 0.29
RNF220-211ENST00000474956 ARAP3Q8WWN8 1544 aa16.87■□□□□ 0.29
RNF220-211ENST00000474956 TMC1Q8TDI8 760 aa16.87■□□□□ 0.29
RNF220-211ENST00000474956 ARID4BQ4LE39 1312 aaPredicted RBP16.87■□□□□ 0.29
RNF220-211ENST00000474956 PNISRQ8TF01 805 aaKnown RBP16.87■□□□□ 0.29
RNF220-211ENST00000474956 PRDM15P57071 1507 aaPredicted RBP16.87■□□□□ 0.29
RNF220-211ENST00000474956 SPHKAPQ2M3C7 1700 aa16.86■□□□□ 0.29
RNF220-211ENST00000474956 KIDINS220Q9ULH0 1771 aa16.86■□□□□ 0.29
RNF220-211ENST00000474956 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
RNF220-211ENST00000474956 MROH1Q8NDA8 1641 aa16.85■□□□□ 0.29
RNF220-211ENST00000474956 NPM1P06748 294 aaKnown RBP eCLIP16.85■□□□□ 0.29
RNF220-211ENST00000474956 PPP4R2Q9NY27 417 aa16.85■□□□□ 0.29
RNF220-211ENST00000474956 DEPDC5O75140 1603 aa16.85■□□□□ 0.29
RNF220-211ENST00000474956 RAPGEF3O95398 923 aa16.85■□□□□ 0.29
RNF220-211ENST00000474956 PER1O15534 1290 aaPredicted RBP16.85■□□□□ 0.29
RNF220-211ENST00000474956 PANK3Q9H999 370 aa16.85■□□□□ 0.29
RNF220-211ENST00000474956 TRPM2O94759 1503 aa16.83■□□□□ 0.29
RNF220-211ENST00000474956 GGT6Q6P531 493 aa16.83■□□□□ 0.29
RNF220-211ENST00000474956 COL17A1Q9UMD9 1497 aaPredicted RBP16.83■□□□□ 0.29
RNF220-211ENST00000474956 MADDQ8WXG6 1647 aa16.83■□□□□ 0.28
RNF220-211ENST00000474956 CD109Q6YHK3 1445 aa16.82■□□□□ 0.28
RNF220-211ENST00000474956 PTPRTO14522 1441 aa16.82■□□□□ 0.28
RNF220-211ENST00000474956 ADGRF5Q8IZF2 1346 aa16.81■□□□□ 0.28
RNF220-211ENST00000474956 CFAP70Q5T0N1 1121 aa16.81■□□□□ 0.28
RNF220-211ENST00000474956 TET3O43151 1660 aa16.81■□□□□ 0.28
RNF220-211ENST00000474956 CEP152O94986 1710 aa16.8■□□□□ 0.28
RNF220-211ENST00000474956 CHGAP10645 457 aaKnown RBP16.8■□□□□ 0.28
RNF220-211ENST00000474956 MYBBP1AQ9BQG0 1328 aaKnown RBP16.8■□□□□ 0.28
RNF220-211ENST00000474956 ERICH6Q7L0X2 663 aa16.79■□□□□ 0.28
RNF220-211ENST00000474956 VWDEQ8N2E2 1590 aa16.79■□□□□ 0.28
RNF220-211ENST00000474956 KANK1Q14678 1352 aa16.79■□□□□ 0.28
RNF220-211ENST00000474956 RNF17Q9BXT8 1623 aaKnown RBP16.79■□□□□ 0.28
RNF220-211ENST00000474956 NUTM2DQ5VT03 806 aaPredicted RBP16.78■□□□□ 0.28
RNF220-211ENST00000474956 EIF2AK4Q9P2K8 1649 aaKnown RBP16.78■□□□□ 0.28
RNF220-211ENST00000474956 PPRC1Q5VV67 1664 aaKnown RBP16.78■□□□□ 0.28
RNF220-211ENST00000474956 TMF1P82094 1093 aa16.77■□□□□ 0.27
RNF220-211ENST00000474956 CYB5RLQ6IPT4 315 aa16.77■□□□□ 0.27
RNF220-211ENST00000474956 B4GALNT3Q6L9W6 998 aa16.76■□□□□ 0.27
RNF220-211ENST00000474956 MROH2AA6NES4 1674 aa16.76■□□□□ 0.27
RNF220-211ENST00000474956 ZNF518AQ6AHZ1 1483 aa16.76■□□□□ 0.27
RNF220-211ENST00000474956 LAMC1P11047 1609 aa16.76■□□□□ 0.27
RNF220-211ENST00000474956 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
RNF220-211ENST00000474956 PARD3Q8TEW0 1356 aa16.75■□□□□ 0.27
RNF220-211ENST00000474956 FRMPD1Q5SYB0 1578 aa16.75■□□□□ 0.27
RNF220-211ENST00000474956 RALBP1Q15311 655 aa16.75■□□□□ 0.27
RNF220-211ENST00000474956 POGZQ7Z3K3 1410 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms