RNA–Protein interactions for RNA: ENST00000473626.1

CNOT9-206, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-206ENST00000473626 FBXW7Q969H0 707 aa12.41□□□□□ -0.42
CNOT9-206ENST00000473626 C6orf132Q5T0Z8 1188 aa12.4□□□□□ -0.42
CNOT9-206ENST00000473626 NPDC1Q9NQX5 325 aaPredicted RBP12.38□□□□□ -0.43
CNOT9-206ENST00000473626 FECHP22830 423 aa12.37□□□□□ -0.43
CNOT9-206ENST00000473626 PSDA5PKW4 1024 aaPredicted RBP12.36□□□□□ -0.43
CNOT9-206ENST00000473626 ZMYND10O75800 440 aa12.36□□□□□ -0.43
CNOT9-206ENST00000473626 PTGDRQ13258 359 aa12.36□□□□□ -0.43
CNOT9-206ENST00000473626 HS3ST6Q96QI5 342 aa12.36□□□□□ -0.43
CNOT9-206ENST00000473626 COL9A1P20849 921 aa12.35□□□□□ -0.43
CNOT9-206ENST00000473626 POTEEQ6S8J3 1075 aa12.35□□□□□ -0.43
CNOT9-206ENST00000473626 BCL2L12Q9HB09 334 aa12.34□□□□□ -0.43
CNOT9-206ENST00000473626 AXIN2Q9Y2T1 843 aa12.34□□□□□ -0.43
CNOT9-206ENST00000473626 FCHSD2O94868 740 aa12.33□□□□□ -0.44
CNOT9-206ENST00000473626 SLC24A3Q9HC58 644 aa12.33□□□□□ -0.44
CNOT9-206ENST00000473626 PSEN2P49810 448 aa12.32□□□□□ -0.44
CNOT9-206ENST00000473626 KCNK17Q96T54 332 aa12.32□□□□□ -0.44
CNOT9-206ENST00000473626 BARGINQ6ZT62 677 aa12.31□□□□□ -0.44
CNOT9-206ENST00000473626 GNPATO15228 680 aa12.3□□□□□ -0.44
CNOT9-206ENST00000473626 PTPREP23469 700 aa12.3□□□□□ -0.44
CNOT9-206ENST00000473626 HIC1Q14526 733 aa12.28□□□□□ -0.44
CNOT9-206ENST00000473626 KRI1Q8N9T8 703 aaKnown RBP12.28□□□□□ -0.44
CNOT9-206ENST00000473626 ZNF687Q8N1G0 1237 aa12.27□□□□□ -0.45
CNOT9-206ENST00000473626 FAM161AQ3B820 660 aa12.26□□□□□ -0.45
CNOT9-206ENST00000473626 DMRTA1Q5VZB9 504 aa12.26□□□□□ -0.45
CNOT9-206ENST00000473626 PADI6Q6TGC4 694 aa12.26□□□□□ -0.45
CNOT9-206ENST00000473626 FAM198AQ9UFP1 575 aa12.25□□□□□ -0.45
CNOT9-206ENST00000473626 PPP1R3GB7ZBB8 358 aa12.24□□□□□ -0.45
CNOT9-206ENST00000473626 PROX2Q3B8N5 592 aa12.24□□□□□ -0.45
CNOT9-206ENST00000473626 CDCA7LQ96GN5 454 aa12.24□□□□□ -0.45
CNOT9-206ENST00000473626 ARHGAP33O14559 1287 aa12.23□□□□□ -0.45
CNOT9-206ENST00000473626 PRSS12P56730 875 aa12.22□□□□□ -0.45
CNOT9-206ENST00000473626 MAP2K5Q13163 448 aa12.21□□□□□ -0.45
CNOT9-206ENST00000473626 CERKQ8TCT0 537 aa12.21□□□□□ -0.45
CNOT9-206ENST00000473626 TSKSQ9UJT2 592 aa12.21□□□□□ -0.45
CNOT9-206ENST00000473626 C3orf80F5H4A9 247 aa12.2□□□□□ -0.46
CNOT9-206ENST00000473626 CCDC102AQ96A19 550 aa12.2□□□□□ -0.46
CNOT9-206ENST00000473626 IRF6O14896 467 aa12.19□□□□□ -0.46
CNOT9-206ENST00000473626 ZBED2Q9BTP6 218 aa12.19□□□□□ -0.46
CNOT9-206ENST00000473626 TTC13Q8NBP0 860 aa12.18□□□□□ -0.46
CNOT9-206ENST00000473626 MINK1Q8N4C8 1332 aaPredicted RBP12.17□□□□□ -0.46
CNOT9-206ENST00000473626 POTEGQ6S5H5 508 aa12.17□□□□□ -0.46
CNOT9-206ENST00000473626 KCNH8Q96L42 1107 aa12.17□□□□□ -0.46
CNOT9-206ENST00000473626 POTEMA6NI47 508 aa12.16□□□□□ -0.46
CNOT9-206ENST00000473626 TRIM6-TRIM34B2RNG4 842 aa12.16□□□□□ -0.46
CNOT9-206ENST00000473626 AK7Q96M32 723 aa12.16□□□□□ -0.46
CNOT9-206ENST00000473626 SMAPO00193 183 aa12.15□□□□□ -0.46
CNOT9-206ENST00000473626 PBX2P40425 430 aa12.15□□□□□ -0.46
CNOT9-206ENST00000473626 NLRP7Q8WX94 980 aa12.15□□□□□ -0.46
CNOT9-206ENST00000473626 PHOX2BQ99453 314 aa12.14□□□□□ -0.47
CNOT9-206ENST00000473626 ADGRG1Q9Y653 693 aa12.14□□□□□ -0.47
CNOT9-206ENST00000473626 TRIM66O15016 1216 aa12.13□□□□□ -0.47
CNOT9-206ENST00000473626 KIAA1468Q9P260 1216 aa12.13□□□□□ -0.47
CNOT9-206ENST00000473626 RBM27Q9P2N5 1060 aaKnown RBP12.13□□□□□ -0.47
CNOT9-206ENST00000473626 NUDT18Q6ZVK8 323 aa12.12□□□□□ -0.47
CNOT9-206ENST00000473626 VPS9D1Q9Y2B5 631 aa12.12□□□□□ -0.47
CNOT9-206ENST00000473626 KRTAP3-3Q9BYR6 98 aa12.11□□□□□ -0.47
CNOT9-206ENST00000473626 KRTAP3-2Q9BYR7 98 aa12.11□□□□□ -0.47
CNOT9-206ENST00000473626 PNMA3Q9UL41 463 aa12.11□□□□□ -0.47
CNOT9-206ENST00000473626 LSM11P83369 360 aaKnown RBP eCLIP12.1□□□□□ -0.47
CNOT9-206ENST00000473626 ANKRD13DQ6ZTN6 518 aa12.1□□□□□ -0.47
CNOT9-206ENST00000473626 TATDN2Q93075 761 aa12.09□□□□□ -0.47
CNOT9-206ENST00000473626 SEPT9Q9UHD8 586 aaPredicted RBP12.09□□□□□ -0.47
CNOT9-206ENST00000473626 METTL3Q86U44 580 aaKnown RBP12.08□□□□□ -0.48
CNOT9-206ENST00000473626 PACS2Q86VP3 889 aa12.08□□□□□ -0.48
CNOT9-206ENST00000473626 CDAN1Q8IWY9 1227 aa12.07□□□□□ -0.48
CNOT9-206ENST00000473626 PXYLP1Q8TE99 480 aa12.07□□□□□ -0.48
CNOT9-206ENST00000473626 PDE4DQ08499 809 aa12.06□□□□□ -0.48
CNOT9-206ENST00000473626 ADGRD1Q6QNK2 874 aa12.06□□□□□ -0.48
CNOT9-206ENST00000473626 EYA1Q99502 592 aa12.06□□□□□ -0.48
CNOT9-206ENST00000473626 SLC4A5Q9BY07 1137 aa12.06□□□□□ -0.48
CNOT9-206ENST00000473626 GPBP1L1Q9HC44 474 aaPredicted RBP12.06□□□□□ -0.48
CNOT9-206ENST00000473626 BRPF1P55201 1214 aaPredicted RBP12.05□□□□□ -0.48
CNOT9-206ENST00000473626 NEUROD2Q15784 382 aa12.05□□□□□ -0.48
CNOT9-206ENST00000473626 RABGEF1Q9UJ41 708 aa12.05□□□□□ -0.48
CNOT9-206ENST00000473626 NBPF26B4DH59 902 aa12.04□□□□□ -0.48
CNOT9-206ENST00000473626 OATP04181 439 aa12.04□□□□□ -0.48
CNOT9-206ENST00000473626 REPIN1Q9BWE0 567 aaKnown RBP12.04□□□□□ -0.48
CNOT9-206ENST00000473626 ONECUT3O60422 494 aaPredicted RBP12.03□□□□□ -0.48
CNOT9-206ENST00000473626 MDM2Q00987 491 aaPredicted RBP12.03□□□□□ -0.48
CNOT9-206ENST00000473626 RBM46Q8TBY0 533 aaKnown RBP12.03□□□□□ -0.48
CNOT9-206ENST00000473626 RCCD1A6NED2 376 aa12.02□□□□□ -0.49
CNOT9-206ENST00000473626 BHMG1C9JSJ3 638 aaPredicted RBP12.01□□□□□ -0.49
CNOT9-206ENST00000473626 TK2O00142 265 aa12.01□□□□□ -0.49
CNOT9-206ENST00000473626 TTLL12Q14166 644 aaPredicted RBP12□□□□□ -0.49
CNOT9-206ENST00000473626 AMHR2Q16671 573 aa12□□□□□ -0.49
CNOT9-206ENST00000473626 PARP9Q8IXQ6 854 aa12□□□□□ -0.49
CNOT9-206ENST00000473626 HRO43593 1189 aa11.99□□□□□ -0.49
CNOT9-206ENST00000473626 KDM4CQ9H3R0 1056 aa11.96□□□□□ -0.49
CNOT9-206ENST00000473626 TMUB1Q9BVT8 246 aa11.95□□□□□ -0.5
CNOT9-206ENST00000473626 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.94□□□□□ -0.5
CNOT9-206ENST00000473626 DNAJB2P25686 324 aa11.94□□□□□ -0.5
CNOT9-206ENST00000473626 GIGYF2Q6Y7W6 1299 aaKnown RBP11.94□□□□□ -0.5
CNOT9-206ENST00000473626 MRPL50Q8N5N7 158 aaKnown RBP11.94□□□□□ -0.5
CNOT9-206ENST00000473626 NBPF3Q9H094 633 aa11.94□□□□□ -0.5
CNOT9-206ENST00000473626 FAM98CQ17RN3 349 aaKnown RBP11.93□□□□□ -0.5
CNOT9-206ENST00000473626 SWT1Q5T5J6 900 aaKnown RBP11.93□□□□□ -0.5
CNOT9-206ENST00000473626 TMEM134Q9H6X4 195 aa11.93□□□□□ -0.5
CNOT9-206ENST00000473626 GPCPD1Q9NPB8 672 aa11.93□□□□□ -0.5
CNOT9-206ENST00000473626 CLCN1P35523 988 aa11.92□□□□□ -0.5
CNOT9-206ENST00000473626 MS4A1P11836 297 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms