RNA–Protein interactions for RNA: ENST00000472129.3

CLTC-204, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-204ENST00000472129 HCSTQ9UBK5 93 aa11.87□□□□□ -0.51
CLTC-204ENST00000472129 SEMA3EO15041 775 aa11.86□□□□□ -0.51
CLTC-204ENST00000472129 MLLT3P42568 568 aaPredicted RBP11.86□□□□□ -0.51
CLTC-204ENST00000472129 NBR1Q14596 966 aa11.84□□□□□ -0.51
CLTC-204ENST00000472129 PLA2G2EQ9NZK7 142 aa11.84□□□□□ -0.51
CLTC-204ENST00000472129 PRIM1P49642 420 aaKnown RBP11.83□□□□□ -0.52
CLTC-204ENST00000472129 TYW1BQ6NUM6 668 aa11.83□□□□□ -0.52
CLTC-204ENST00000472129 RBM33Q96EV2 1170 aaKnown RBP11.83□□□□□ -0.52
CLTC-204ENST00000472129 KCNK17Q96T54 332 aa11.82□□□□□ -0.52
CLTC-204ENST00000472129 EPAS1Q99814 870 aa11.82□□□□□ -0.52
CLTC-204ENST00000472129 BCL2L12Q9HB09 334 aa11.82□□□□□ -0.52
CLTC-204ENST00000472129 OSBPP22059 807 aa11.8□□□□□ -0.52
CLTC-204ENST00000472129 FBXW7Q969H0 707 aa11.8□□□□□ -0.52
CLTC-204ENST00000472129 PTPREP23469 700 aa11.77□□□□□ -0.53
CLTC-204ENST00000472129 EN1Q05925 392 aaPredicted RBP11.77□□□□□ -0.53
CLTC-204ENST00000472129 KCTD12Q96CX2 325 aaKnown RBP11.77□□□□□ -0.53
CLTC-204ENST00000472129 TESPA1A2RU30 521 aaPredicted RBP11.76□□□□□ -0.53
CLTC-204ENST00000472129 TSR1Q2NL82 804 aaKnown RBP11.76□□□□□ -0.53
CLTC-204ENST00000472129 C6orf132Q5T0Z8 1188 aa11.76□□□□□ -0.53
CLTC-204ENST00000472129 VPS9D1Q9Y2B5 631 aa11.76□□□□□ -0.53
CLTC-204ENST00000472129 MAP3K7O43318 606 aa11.75□□□□□ -0.53
CLTC-204ENST00000472129 KCNH8Q96L42 1107 aa11.75□□□□□ -0.53
CLTC-204ENST00000472129 COL9A1P20849 921 aa11.74□□□□□ -0.53
CLTC-204ENST00000472129 STAC3Q96MF2 364 aa11.73□□□□□ -0.53
CLTC-204ENST00000472129 CDHR5Q9HBB8 845 aa11.7□□□□□ -0.54
CLTC-204ENST00000472129 PPP1R3GB7ZBB8 358 aa11.69□□□□□ -0.54
CLTC-204ENST00000472129 SLC4A5Q9BY07 1137 aa11.69□□□□□ -0.54
CLTC-204ENST00000472129 ZBED2Q9BTP6 218 aa11.68□□□□□ -0.54
CLTC-204ENST00000472129 RBM26Q5T8P6 1007 aaKnown RBP11.67□□□□□ -0.54
CLTC-204ENST00000472129 BHMG1C9JSJ3 638 aaPredicted RBP11.66□□□□□ -0.54
CLTC-204ENST00000472129 PROX2Q3B8N5 592 aa11.66□□□□□ -0.54
CLTC-204ENST00000472129 PTPN5P54829 565 aa11.64□□□□□ -0.55
CLTC-204ENST00000472129 SMYD5Q6GMV2 418 aa11.64□□□□□ -0.55
CLTC-204ENST00000472129 NPDC1Q9NQX5 325 aaPredicted RBP11.64□□□□□ -0.55
CLTC-204ENST00000472129 NUTM2FA1L443 756 aa11.62□□□□□ -0.55
CLTC-204ENST00000472129 THSD4Q6ZMP0 1018 aa11.6□□□□□ -0.55
CLTC-204ENST00000472129 CDCA7LQ96GN5 454 aa11.58□□□□□ -0.56
CLTC-204ENST00000472129 FAM198AQ9UFP1 575 aa11.58□□□□□ -0.56
CLTC-204ENST00000472129 TSKSQ9UJT2 592 aa11.58□□□□□ -0.56
CLTC-204ENST00000472129 TRIM6-TRIM34B2RNG4 842 aa11.57□□□□□ -0.56
CLTC-204ENST00000472129 PRSS12P56730 875 aa11.57□□□□□ -0.56
CLTC-204ENST00000472129 PTGDRQ13258 359 aa11.57□□□□□ -0.56
CLTC-204ENST00000472129 KIAA1468Q9P260 1216 aa11.57□□□□□ -0.56
CLTC-204ENST00000472129 MRPL50Q8N5N7 158 aaKnown RBP11.56□□□□□ -0.56
CLTC-204ENST00000472129 CERKQ8TCT0 537 aa11.56□□□□□ -0.56
CLTC-204ENST00000472129 WNT2BQ93097 391 aa11.56□□□□□ -0.56
CLTC-204ENST00000472129 RABGEF1Q9UJ41 708 aa11.55□□□□□ -0.56
CLTC-204ENST00000472129 GOLGA8CPA6NN73 597 aa11.54□□□□□ -0.56
CLTC-204ENST00000472129 C3orf80F5H4A9 247 aa11.54□□□□□ -0.56
CLTC-204ENST00000472129 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLTC-204ENST00000472129 PADI6Q6TGC4 694 aa11.53□□□□□ -0.56
CLTC-204ENST00000472129 NBPF3Q9H094 633 aa11.53□□□□□ -0.56
CLTC-204ENST00000472129 TULP1O00294 542 aaPredicted RBP11.52□□□□□ -0.57
CLTC-204ENST00000472129 ONECUT3O60422 494 aaPredicted RBP11.52□□□□□ -0.57
CLTC-204ENST00000472129 GPR37O15354 613 aa11.51□□□□□ -0.57
CLTC-204ENST00000472129 FCHSD2O94868 740 aa11.51□□□□□ -0.57
CLTC-204ENST00000472129 SEPT9Q9UHD8 586 aaPredicted RBP11.51□□□□□ -0.57
CLTC-204ENST00000472129 IFFO2Q5TF58 517 aa11.5□□□□□ -0.57
CLTC-204ENST00000472129 PACS2Q86VP3 889 aa11.5□□□□□ -0.57
CLTC-204ENST00000472129 GPIHBP1Q8IV16 184 aa11.5□□□□□ -0.57
CLTC-204ENST00000472129 TTC13Q8NBP0 860 aa11.5□□□□□ -0.57
CLTC-204ENST00000472129 SMAPO00193 183 aa11.49□□□□□ -0.57
CLTC-204ENST00000472129 LMOD2Q6P5Q4 547 aa11.49□□□□□ -0.57
CLTC-204ENST00000472129 RBM27Q9P2N5 1060 aaKnown RBP11.49□□□□□ -0.57
CLTC-204ENST00000472129 FECHP22830 423 aa11.48□□□□□ -0.57
CLTC-204ENST00000472129 FAM161AQ3B820 660 aa11.46□□□□□ -0.57
CLTC-204ENST00000472129 TATDN2Q93075 761 aa11.46□□□□□ -0.57
CLTC-204ENST00000472129 BCANQ96GW7 911 aa11.46□□□□□ -0.57
CLTC-204ENST00000472129 PNMA3Q9UL41 463 aa11.46□□□□□ -0.57
CLTC-204ENST00000472129 HIC1Q14526 733 aa11.45□□□□□ -0.58
CLTC-204ENST00000472129 NUDT18Q6ZVK8 323 aa11.45□□□□□ -0.58
CLTC-204ENST00000472129 A0A0G2JS52 829 aa11.44□□□□□ -0.58
CLTC-204ENST00000472129 GNPATO15228 680 aa11.43□□□□□ -0.58
CLTC-204ENST00000472129 NBPF26B4DH59 902 aa11.42□□□□□ -0.58
CLTC-204ENST00000472129 LAPTM4BQ86VI4 370 aa11.42□□□□□ -0.58
CLTC-204ENST00000472129 RGS20O76081 388 aa11.41□□□□□ -0.58
CLTC-204ENST00000472129 FAM98CQ17RN3 349 aaKnown RBP11.41□□□□□ -0.58
CLTC-204ENST00000472129 ANKK1Q8NFD2 765 aa11.41□□□□□ -0.58
CLTC-204ENST00000472129 ZFRQ96KR1 1074 aaKnown RBP11.41□□□□□ -0.58
CLTC-204ENST00000472129 BCAMP50895 628 aa11.4□□□□□ -0.58
CLTC-204ENST00000472129 EYA1Q99502 592 aa11.4□□□□□ -0.58
CLTC-204ENST00000472129 ADGRG1Q9Y653 693 aa11.4□□□□□ -0.58
CLTC-204ENST00000472129 ZC3H15Q8WU90 426 aaKnown RBP11.37□□□□□ -0.59
CLTC-204ENST00000472129 SOWAHBA6NEL2 793 aa11.36□□□□□ -0.59
CLTC-204ENST00000472129 ITGBL1O95965 494 aaPredicted RBP11.35□□□□□ -0.59
CLTC-204ENST00000472129 SAMD7Q7Z3H4 446 aa11.34□□□□□ -0.59
CLTC-204ENST00000472129 RBM46Q8TBY0 533 aaKnown RBP11.33□□□□□ -0.6
CLTC-204ENST00000472129 PXYLP1Q8TE99 480 aa11.32□□□□□ -0.6
CLTC-204ENST00000472129 ZMYND10O75800 440 aa11.31□□□□□ -0.6
CLTC-204ENST00000472129 OATP04181 439 aa11.31□□□□□ -0.6
CLTC-204ENST00000472129 METTL3Q86U44 580 aaKnown RBP11.31□□□□□ -0.6
CLTC-204ENST00000472129 IRX2Q9BZI1 471 aaPredicted RBP11.31□□□□□ -0.6
CLTC-204ENST00000472129 WBP1LQ9NX94 342 aa11.31□□□□□ -0.6
CLTC-204ENST00000472129 RCCD1A6NED2 376 aa11.3□□□□□ -0.6
CLTC-204ENST00000472129 MAP2K5Q13163 448 aa11.3□□□□□ -0.6
CLTC-204ENST00000472129 SWT1Q5T5J6 900 aaKnown RBP11.3□□□□□ -0.6
CLTC-204ENST00000472129 LRCH3Q96II8 777 aa11.3□□□□□ -0.6
CLTC-204ENST00000472129 PHOX2BQ99453 314 aa11.3□□□□□ -0.6
CLTC-204ENST00000472129 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.3□□□□□ -0.6
CLTC-204ENST00000472129 IRF6O14896 467 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms