RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 FAM135BQ49AJ0 1406 aa7.19□□□□□ -1.26
CPS1-205ENST00000467353 MROH2AA6NES4 1674 aa7.19□□□□□ -1.26
CPS1-205ENST00000467353 MED14O60244 1454 aa7.18□□□□□ -1.26
CPS1-205ENST00000467353 ATXN8OSP0DMR3 200 aa7.18□□□□□ -1.26
CPS1-205ENST00000467353 FKBP8Q14318 412 aa7.18□□□□□ -1.26
CPS1-205ENST00000467353 KIDINS220Q9ULH0 1771 aa7.18□□□□□ -1.26
CPS1-205ENST00000467353 CLTCQ00610 1675 aaKnown RBP7.17□□□□□ -1.26
CPS1-205ENST00000467353 SETD1AO15047 1707 aaKnown RBP7.17□□□□□ -1.26
CPS1-205ENST00000467353 MYO5CQ9NQX4 1742 aa7.17□□□□□ -1.26
CPS1-205ENST00000467353 A2MP01023 1474 aa7.17□□□□□ -1.26
CPS1-205ENST00000467353 ABCC1P33527 1531 aa7.17□□□□□ -1.26
CPS1-205ENST00000467353 MIA2Q96PC5 1412 aa7.16□□□□□ -1.26
CPS1-205ENST00000467353 SAMD9LQ8IVG5 1584 aa7.16□□□□□ -1.26
CPS1-205ENST00000467353 RBM33Q96EV2 1170 aaKnown RBP7.15□□□□□ -1.26
CPS1-205ENST00000467353 CLIP1P30622 1438 aa7.15□□□□□ -1.27
CPS1-205ENST00000467353 RXRBP28702 533 aa7.14□□□□□ -1.27
CPS1-205ENST00000467353 ZNF772Q68DY9 489 aaPredicted RBP7.14□□□□□ -1.27
CPS1-205ENST00000467353 STRCP1A6NGW2 1772 aa7.13□□□□□ -1.27
CPS1-205ENST00000467353 SUPT6HQ7KZ85 1726 aaKnown RBP7.13□□□□□ -1.27
CPS1-205ENST00000467353 RNF17Q9BXT8 1623 aaKnown RBP7.13□□□□□ -1.27
CPS1-205ENST00000467353 WASHC2CQ9Y4E1 1318 aa7.13□□□□□ -1.27
CPS1-205ENST00000467353 KIF3BO15066 747 aa7.13□□□□□ -1.27
CPS1-205ENST00000467353 LTKP29376 864 aa7.13□□□□□ -1.27
CPS1-205ENST00000467353 PLXNC1O60486 1568 aa7.12□□□□□ -1.27
CPS1-205ENST00000467353 FAM135AQ9P2D6 1515 aa7.12□□□□□ -1.27
CPS1-205ENST00000467353 JCADQ9P266 1359 aa7.12□□□□□ -1.27
CPS1-205ENST00000467353 MYCNP04198 464 aaPredicted RBP7.12□□□□□ -1.27
CPS1-205ENST00000467353 SLAIN2Q9P270 581 aa7.12□□□□□ -1.27
CPS1-205ENST00000467353 CDC42BPBQ9Y5S2 1711 aa7.12□□□□□ -1.27
CPS1-205ENST00000467353 UGGT1Q9NYU2 1555 aa7.12□□□□□ -1.27
CPS1-205ENST00000467353 PZPP20742 1482 aa7.11□□□□□ -1.27
CPS1-205ENST00000467353 NLRP1Q9C000 1473 aa7.11□□□□□ -1.27
CPS1-205ENST00000467353 FMN1Q68DA7 1419 aa7.11□□□□□ -1.27
CPS1-205ENST00000467353 TMEM94Q12767 1356 aa7.11□□□□□ -1.27
CPS1-205ENST00000467353 MEX3CQ5U5Q3 659 aaKnown RBP7.11□□□□□ -1.27
CPS1-205ENST00000467353 TXNDC2Q86VQ3 553 aa7.11□□□□□ -1.27
CPS1-205ENST00000467353 ITSN2Q9NZM3 1697 aa7.11□□□□□ -1.27
CPS1-205ENST00000467353 DEPDC5O75140 1603 aa7.11□□□□□ -1.27
CPS1-205ENST00000467353 ATP7AQ04656 1500 aa7.11□□□□□ -1.27
CPS1-205ENST00000467353 POLR1AO95602 1720 aaPredicted RBP7.1□□□□□ -1.27
CPS1-205ENST00000467353 DHX29Q7Z478 1369 aaKnown RBP7.1□□□□□ -1.27
CPS1-205ENST00000467353 ZNF644Q9H582 1327 aaPredicted RBP7.1□□□□□ -1.27
CPS1-205ENST00000467353 PROSER2Q86WR7 435 aaPredicted RBP7.1□□□□□ -1.27
CPS1-205ENST00000467353 CFDP1Q9UEE9 299 aaPredicted RBP7.1□□□□□ -1.27
CPS1-205ENST00000467353 ZRANB1Q9UGI0 708 aa7.1□□□□□ -1.27
CPS1-205ENST00000467353 SYCP2Q9BX26 1530 aa7.1□□□□□ -1.27
CPS1-205ENST00000467353 KIAA1107Q9UPP5 1409 aa7.1□□□□□ -1.27
CPS1-205ENST00000467353 LRP6O75581 1613 aa7.09□□□□□ -1.27
CPS1-205ENST00000467353 KCNA6P17658 529 aa7.09□□□□□ -1.27
CPS1-205ENST00000467353 GPATCH8Q9UKJ3 1502 aaKnown RBP7.09□□□□□ -1.27
CPS1-205ENST00000467353 IQGAP1P46940 1657 aa7.09□□□□□ -1.27
CPS1-205ENST00000467353 PREX2Q70Z35 1606 aa7.09□□□□□ -1.28
CPS1-205ENST00000467353 SYNMO15061 1565 aa7.08□□□□□ -1.28
CPS1-205ENST00000467353 SPATA31A6Q5VVP1 1343 aa7.08□□□□□ -1.28
CPS1-205ENST00000467353 MAPK8IP2Q13387 824 aaPredicted RBP7.08□□□□□ -1.28
CPS1-205ENST00000467353 KDM5DQ9BY66 1539 aa7.07□□□□□ -1.28
CPS1-205ENST00000467353 ARHGAP35Q9NRY4 1499 aa7.07□□□□□ -1.28
CPS1-205ENST00000467353 NUTM2BA6NNL0 878 aaPredicted RBP7.07□□□□□ -1.28
CPS1-205ENST00000467353 NUTM2EB1AL46 878 aaPredicted RBP7.07□□□□□ -1.28
CPS1-205ENST00000467353 UBTFP17480 764 aaKnown RBP7.07□□□□□ -1.28
CPS1-205ENST00000467353 NUTM2DQ5VT03 806 aaPredicted RBP7.07□□□□□ -1.28
CPS1-205ENST00000467353 NUTM2AQ8IVF1 878 aaPredicted RBP7.07□□□□□ -1.28
CPS1-205ENST00000467353 SLC26A8Q96RN1 970 aa7.07□□□□□ -1.28
CPS1-205ENST00000467353 SCAF11Q99590 1463 aaKnown RBP7.06□□□□□ -1.28
CPS1-205ENST00000467353 CDK12Q9NYV4 1490 aaPredicted RBP7.06□□□□□ -1.28
CPS1-205ENST00000467353 QTRT2Q9H974 415 aaKnown RBP7.06□□□□□ -1.28
CPS1-205ENST00000467353 INO80Q9ULG1 1556 aaPredicted RBP7.06□□□□□ -1.28
CPS1-205ENST00000467353 ROBO1Q9Y6N7 1651 aa7.06□□□□□ -1.28
CPS1-205ENST00000467353 AFF2P51816 1311 aa7.05□□□□□ -1.28
CPS1-205ENST00000467353 SETBP1Q9Y6X0 1596 aa7.05□□□□□ -1.28
CPS1-205ENST00000467353 EID1Q9Y6B2 187 aa7.05□□□□□ -1.28
CPS1-205ENST00000467353 NCOA2Q15596 1464 aa7.04□□□□□ -1.28
CPS1-205ENST00000467353 MBD5Q9P267 1494 aa7.04□□□□□ -1.28
CPS1-205ENST00000467353 HOXD11P31277 338 aaPredicted RBP7.04□□□□□ -1.28
CPS1-205ENST00000467353 RBM6P78332 1123 aaKnown RBP7.04□□□□□ -1.28
CPS1-205ENST00000467353 PLEKHH2Q8IVE3 1493 aa7.04□□□□□ -1.28
CPS1-205ENST00000467353 ZC3H13Q5T200 1668 aaKnown RBP7.03□□□□□ -1.28
CPS1-205ENST00000467353 RTEL1-TNFRSF6BF6WH68 1400 aa7.03□□□□□ -1.28
CPS1-205ENST00000467353 RGS12O14924 1447 aa7.03□□□□□ -1.28
CPS1-205ENST00000467353 MAP3K1Q13233 1512 aa7.03□□□□□ -1.28
CPS1-205ENST00000467353 MSH6P52701 1360 aa7.03□□□□□ -1.28
CPS1-205ENST00000467353 CCNB3Q8WWL7 1395 aa7.03□□□□□ -1.28
CPS1-205ENST00000467353 XIRP1Q702N8 1843 aaKnown RBP7.03□□□□□ -1.28
CPS1-205ENST00000467353 ARHGAP23Q9P227 1491 aa7.03□□□□□ -1.28
CPS1-205ENST00000467353 FGD6Q6ZV73 1430 aa7.02□□□□□ -1.29
CPS1-205ENST00000467353 LRRC9Q6ZRR7 1453 aa7.02□□□□□ -1.29
CPS1-205ENST00000467353 EEA1Q15075 1411 aa7.01□□□□□ -1.29
CPS1-205ENST00000467353 CASKIN1Q8WXD9 1431 aa7.01□□□□□ -1.29
CPS1-205ENST00000467353 CDC42BPAQ5VT25 1732 aa7.01□□□□□ -1.29
CPS1-205ENST00000467353 ERVK-7P63135 1459 aa7.01□□□□□ -1.29
CPS1-205ENST00000467353 TMEM2Q9UHN6 1383 aa7.01□□□□□ -1.29
CPS1-205ENST00000467353 C8orf37Q96NL8 207 aa7.01□□□□□ -1.29
CPS1-205ENST00000467353 SLIT1O75093 1534 aa7.01□□□□□ -1.29
CPS1-205ENST00000467353 PRDM15P57071 1507 aaPredicted RBP7.01□□□□□ -1.29
CPS1-205ENST00000467353 ATAD2Q6PL18 1390 aa7□□□□□ -1.29
CPS1-205ENST00000467353 SLC4A2P04920 1241 aa7□□□□□ -1.29
CPS1-205ENST00000467353 PHLPP1O60346 1717 aa7□□□□□ -1.29
CPS1-205ENST00000467353 LRRIQ1Q96JM4 1722 aa7□□□□□ -1.29
CPS1-205ENST00000467353 COL16A1Q07092 1604 aaPredicted RBP7□□□□□ -1.29
CPS1-205ENST00000467353 CCDC18Q5T9S5 1454 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms