RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-209ENST00000467081 PTPREP23469 700 aa14□□□□□ -0.17
CCNL1-209ENST00000467081 PRIM1P49642 420 aaKnown RBP14□□□□□ -0.17
CCNL1-209ENST00000467081 EN1Q05925 392 aaPredicted RBP14□□□□□ -0.17
CCNL1-209ENST00000467081 MAP3K7O43318 606 aa13.99□□□□□ -0.17
CCNL1-209ENST00000467081 KCNH8Q96L42 1107 aa13.99□□□□□ -0.17
CCNL1-209ENST00000467081 C6orf132Q5T0Z8 1188 aa13.96□□□□□ -0.17
CCNL1-209ENST00000467081 TSR1Q2NL82 804 aaKnown RBP13.95□□□□□ -0.18
CCNL1-209ENST00000467081 DMRTA1Q5VZB9 504 aa13.95□□□□□ -0.18
CCNL1-209ENST00000467081 SMYD5Q6GMV2 418 aa13.94□□□□□ -0.18
CCNL1-209ENST00000467081 LSM11P83369 360 aaKnown RBP eCLIP13.93□□□□□ -0.181e-10■■□□□ 12.6
CCNL1-209ENST00000467081 ANKRD13DQ6ZTN6 518 aa13.93□□□□□ -0.18
CCNL1-209ENST00000467081 COL9A1P20849 921 aa13.91□□□□□ -0.18
CCNL1-209ENST00000467081 PPP1R3GB7ZBB8 358 aa13.89□□□□□ -0.19
CCNL1-209ENST00000467081 CDHR5Q9HBB8 845 aa13.89□□□□□ -0.19
CCNL1-209ENST00000467081 RBM26Q5T8P6 1007 aaKnown RBP13.88□□□□□ -0.19
CCNL1-209ENST00000467081 NUTM2FA1L443 756 aa13.85□□□□□ -0.19
CCNL1-209ENST00000467081 TULP1O00294 542 aaPredicted RBP13.85□□□□□ -0.19
CCNL1-209ENST00000467081 ADGRD1Q6QNK2 874 aa13.84□□□□□ -0.19
CCNL1-209ENST00000467081 ZBED2Q9BTP6 218 aa13.84□□□□□ -0.19
CCNL1-209ENST00000467081 PROX2Q3B8N5 592 aa13.82□□□□□ -0.2
CCNL1-209ENST00000467081 VPS9D1Q9Y2B5 631 aa13.82□□□□□ -0.2
CCNL1-209ENST00000467081 TK2O00142 265 aa13.81□□□□□ -0.2
CCNL1-209ENST00000467081 CERKQ8TCT0 537 aa13.8□□□□□ -0.2
CCNL1-209ENST00000467081 SLC4A5Q9BY07 1137 aa13.8□□□□□ -0.2
CCNL1-209ENST00000467081 BCANQ96GW7 911 aa13.79□□□□□ -0.2
CCNL1-209ENST00000467081 NPDC1Q9NQX5 325 aaPredicted RBP13.79□□□□□ -0.2
CCNL1-209ENST00000467081 SPNS2Q8IVW8 549 aa13.77□□□□□ -0.21
CCNL1-209ENST00000467081 PTGDRQ13258 359 aa13.76□□□□□ -0.21
CCNL1-209ENST00000467081 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCNL1-209ENST00000467081 TRIM6-TRIM34B2RNG4 842 aa13.75□□□□□ -0.21
CCNL1-209ENST00000467081 PRSS12P56730 875 aa13.75□□□□□ -0.21
CCNL1-209ENST00000467081 CDCA7LQ96GN5 454 aa13.75□□□□□ -0.21
CCNL1-209ENST00000467081 HRO43593 1189 aa13.74□□□□□ -0.21
CCNL1-209ENST00000467081 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
CCNL1-209ENST00000467081 FCHSD2O94868 740 aa13.73□□□□□ -0.21
CCNL1-209ENST00000467081 LMOD2Q6P5Q4 547 aa13.73□□□□□ -0.21
CCNL1-209ENST00000467081 TSKSQ9UJT2 592 aa13.73□□□□□ -0.21
CCNL1-209ENST00000467081 STAC3Q96MF2 364 aa13.72□□□□□ -0.21
CCNL1-209ENST00000467081 KIAA1468Q9P260 1216 aa13.72□□□□□ -0.21
CCNL1-209ENST00000467081 RABGEF1Q9UJ41 708 aa13.72□□□□□ -0.21
CCNL1-209ENST00000467081 PADI6Q6TGC4 694 aa13.71□□□□□ -0.21
CCNL1-209ENST00000467081 ONECUT3O60422 494 aaPredicted RBP13.7□□□□□ -0.22
CCNL1-209ENST00000467081 FAM198AQ9UFP1 575 aa13.7□□□□□ -0.22
CCNL1-209ENST00000467081 BHMG1C9JSJ3 638 aaPredicted RBP13.69□□□□□ -0.22
CCNL1-209ENST00000467081 PACS2Q86VP3 889 aa13.69□□□□□ -0.22
CCNL1-209ENST00000467081 GPR37O15354 613 aa13.68□□□□□ -0.22
CCNL1-209ENST00000467081 NBPF3Q9H094 633 aa13.68□□□□□ -0.22
CCNL1-209ENST00000467081 RBM27Q9P2N5 1060 aaKnown RBP13.68□□□□□ -0.22
CCNL1-209ENST00000467081 HIC1Q14526 733 aa13.66□□□□□ -0.22
CCNL1-209ENST00000467081 MRPL50Q8N5N7 158 aaKnown RBP13.66□□□□□ -0.22
CCNL1-209ENST00000467081 MYT1LQ9UL68 1186 aa13.66□□□□□ -0.22
CCNL1-209ENST00000467081 PLSCR2Q9NRY7 297 aa13.65□□□□□ -0.22
CCNL1-209ENST00000467081 TTC13Q8NBP0 860 aa13.64□□□□□ -0.23
CCNL1-209ENST00000467081 SEPT9Q9UHD8 586 aaPredicted RBP13.64□□□□□ -0.23
CCNL1-209ENST00000467081 GNPATO15228 680 aa13.63□□□□□ -0.23
CCNL1-209ENST00000467081 MMRN1Q13201 1228 aa13.63□□□□□ -0.23
CCNL1-209ENST00000467081 NBPF26B4DH59 902 aa13.62□□□□□ -0.23
CCNL1-209ENST00000467081 C3orf80F5H4A9 247 aa13.62□□□□□ -0.23
CCNL1-209ENST00000467081 SMAPO00193 183 aa13.62□□□□□ -0.23
CCNL1-209ENST00000467081 FECHP22830 423 aa13.62□□□□□ -0.23
CCNL1-209ENST00000467081 TATDN2Q93075 761 aa13.62□□□□□ -0.23
CCNL1-209ENST00000467081 PNMA3Q9UL41 463 aa13.62□□□□□ -0.23
CCNL1-209ENST00000467081 NUDT18Q6ZVK8 323 aa13.61□□□□□ -0.23
CCNL1-209ENST00000467081 GOLGA8CPA6NN73 597 aa13.6□□□□□ -0.23
CCNL1-209ENST00000467081 FAM161AQ3B820 660 aa13.58□□□□□ -0.24
CCNL1-209ENST00000467081 RNF166Q96A37 237 aaPredicted RBP13.58□□□□□ -0.24
CCNL1-209ENST00000467081 LAPTM4BQ86VI4 370 aa13.57□□□□□ -0.24
CCNL1-209ENST00000467081 FAM98CQ17RN3 349 aaKnown RBP13.56□□□□□ -0.24
CCNL1-209ENST00000467081 ZC3H15Q8WU90 426 aaKnown RBP13.56□□□□□ -0.24
CCNL1-209ENST00000467081 KCTD12Q96CX2 325 aaKnown RBP13.55□□□□□ -0.24
CCNL1-209ENST00000467081 ADGRG1Q9Y653 693 aa13.55□□□□□ -0.24
CCNL1-209ENST00000467081 WNT2BQ93097 391 aa13.54□□□□□ -0.24
CCNL1-209ENST00000467081 ZFRQ96KR1 1074 aaKnown RBP13.54□□□□□ -0.24
CCNL1-209ENST00000467081 RBM46Q8TBY0 533 aaKnown RBP13.52□□□□□ -0.25
CCNL1-209ENST00000467081 EYA1Q99502 592 aa13.52□□□□□ -0.25
CCNL1-209ENST00000467081 ANKK1Q8NFD2 765 aa13.5□□□□□ -0.25
CCNL1-209ENST00000467081 ZMYND10O75800 440 aa13.48□□□□□ -0.25
CCNL1-209ENST00000467081 OATP04181 439 aa13.48□□□□□ -0.25
CCNL1-209ENST00000467081 MAP2K5Q13163 448 aa13.48□□□□□ -0.25
CCNL1-209ENST00000467081 BARGINQ6ZT62 677 aa13.46□□□□□ -0.25
CCNL1-209ENST00000467081 SAMD7Q7Z3H4 446 aa13.46□□□□□ -0.25
CCNL1-209ENST00000467081 KRI1Q8N9T8 703 aaKnown RBP13.46□□□□□ -0.25
CCNL1-209ENST00000467081 PXYLP1Q8TE99 480 aa13.46□□□□□ -0.25
CCNL1-209ENST00000467081 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
CCNL1-209ENST00000467081 BCAMP50895 628 aa13.45□□□□□ -0.26
CCNL1-209ENST00000467081 THSD4Q6ZMP0 1018 aa13.45□□□□□ -0.26
CCNL1-209ENST00000467081 METTL3Q86U44 580 aaKnown RBP13.45□□□□□ -0.26
CCNL1-209ENST00000467081 RCCD1A6NED2 376 aa13.44□□□□□ -0.26
CCNL1-209ENST00000467081 IRF6O14896 467 aa13.44□□□□□ -0.26
CCNL1-209ENST00000467081 HDGFP51858 240 aaKnown RBP13.44□□□□□ -0.26
CCNL1-209ENST00000467081 LRCH3Q96II8 777 aa13.44□□□□□ -0.26
CCNL1-209ENST00000467081 SOWAHBA6NEL2 793 aa13.43□□□□□ -0.26
CCNL1-209ENST00000467081 DNAJB2P25686 324 aa13.43□□□□□ -0.26
CCNL1-209ENST00000467081 PTPN5P54829 565 aa13.43□□□□□ -0.26
CCNL1-209ENST00000467081 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.43□□□□□ -0.26
CCNL1-209ENST00000467081 CCDC102AQ96A19 550 aa13.42□□□□□ -0.26
CCNL1-209ENST00000467081 SWT1Q5T5J6 900 aaKnown RBP13.41□□□□□ -0.26
CCNL1-209ENST00000467081 RNF40O75150 1001 aa13.4□□□□□ -0.26
CCNL1-209ENST00000467081 PHOX2BQ99453 314 aa13.4□□□□□ -0.26
CCNL1-209ENST00000467081 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms