RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 FANCAO15360 1455 aa20.48■□□□□ 0.87
GAPDH-206ENST00000466525 DHX29Q7Z478 1369 aaKnown RBP20.47■□□□□ 0.87
GAPDH-206ENST00000466525 NUP153P49790 1475 aaKnown RBP20.46■□□□□ 0.87
GAPDH-206ENST00000466525 CERKQ8TCT0 537 aa20.46■□□□□ 0.87
GAPDH-206ENST00000466525 KDM5CP41229 1560 aa20.46■□□□□ 0.87
GAPDH-206ENST00000466525 CFAP74Q9C0B2 1584 aa20.46■□□□□ 0.87
GAPDH-206ENST00000466525 ERICH6Q7L0X2 663 aa20.45■□□□□ 0.86
GAPDH-206ENST00000466525 MAGI2Q86UL8 1455 aa20.45■□□□□ 0.86
GAPDH-206ENST00000466525 UHRF1BP1Q6BDS2 1440 aa20.45■□□□□ 0.86
GAPDH-206ENST00000466525 ROCK2O75116 1388 aaKnown RBP20.44■□□□□ 0.86
GAPDH-206ENST00000466525 IRX6P78412 446 aaPredicted RBP20.44■□□□□ 0.86
GAPDH-206ENST00000466525 KIAA1107Q9UPP5 1409 aa20.44■□□□□ 0.86
GAPDH-206ENST00000466525 RIMS1Q86UR5 1692 aaKnown RBP20.43■□□□□ 0.86
GAPDH-206ENST00000466525 ARHGEF12Q9NZN5 1544 aa20.42■□□□□ 0.86
GAPDH-206ENST00000466525 HSPA2P54652 639 aa20.41■□□□□ 0.86
GAPDH-206ENST00000466525 TROQ12816 1431 aaPredicted RBP20.41■□□□□ 0.86
GAPDH-206ENST00000466525 FAM9BQ8IZU0 186 aa20.41■□□□□ 0.86
GAPDH-206ENST00000466525 CAMSAP2Q08AD1 1489 aa20.41■□□□□ 0.86
GAPDH-206ENST00000466525 KTN1Q86UP2 1357 aaKnown RBP20.4■□□□□ 0.86
GAPDH-206ENST00000466525 SLC4A1APQ9BWU0 796 aaKnown RBP20.4■□□□□ 0.86
GAPDH-206ENST00000466525 RICTORQ6R327 1708 aa20.4■□□□□ 0.86
GAPDH-206ENST00000466525 ZMYM4Q5VZL5 1548 aa20.4■□□□□ 0.86
GAPDH-206ENST00000466525 RALGAPBQ86X10 1494 aa20.39■□□□□ 0.86
GAPDH-206ENST00000466525 KDM5DQ9BY66 1539 aa20.39■□□□□ 0.85
GAPDH-206ENST00000466525 NUDCQ9Y266 331 aa20.39■□□□□ 0.85
GAPDH-206ENST00000466525 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
GAPDH-206ENST00000466525 ZFYVE16Q7Z3T8 1539 aa20.37■□□□□ 0.85
GAPDH-206ENST00000466525 SHANK2Q9UPX8 1470 aa20.37■□□□□ 0.85
GAPDH-206ENST00000466525 FOXD1Q16676 465 aa20.36■□□□□ 0.85
GAPDH-206ENST00000466525 USP47Q96K76 1375 aa20.36■□□□□ 0.85
GAPDH-206ENST00000466525 E9PCH4 1651 aa20.34■□□□□ 0.85
GAPDH-206ENST00000466525 GPATCH8Q9UKJ3 1502 aaKnown RBP20.34■□□□□ 0.85
GAPDH-206ENST00000466525 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.85
GAPDH-206ENST00000466525 B4GALNT3Q6L9W6 998 aa20.33■□□□□ 0.84
GAPDH-206ENST00000466525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.32■□□□□ 0.841e-323■■■□□ 18.8
GAPDH-206ENST00000466525 TTC37Q6PGP7 1564 aa20.31■□□□□ 0.84
GAPDH-206ENST00000466525 YEATS2Q9ULM3 1422 aa20.3■□□□□ 0.84
GAPDH-206ENST00000466525 LRPPRCP42704 1394 aaKnown RBP20.3■□□□□ 0.84
GAPDH-206ENST00000466525 ANKRD30AQ9BXX3 1397 aa20.3■□□□□ 0.84
GAPDH-206ENST00000466525 MLECQ14165 292 aa20.3■□□□□ 0.84
GAPDH-206ENST00000466525 ATP10AO60312 1499 aa20.29■□□□□ 0.84
GAPDH-206ENST00000466525 PLCH2O75038 1416 aa20.28■□□□□ 0.84
GAPDH-206ENST00000466525 SCAPERQ9BY12 1400 aa20.28■□□□□ 0.84
GAPDH-206ENST00000466525 KIF15Q9NS87 1388 aa20.27■□□□□ 0.84
GAPDH-206ENST00000466525 ZNF644Q9H582 1327 aaPredicted RBP20.27■□□□□ 0.84
GAPDH-206ENST00000466525 EFCAB2Q5VUJ9 269 aa20.27■□□□□ 0.83
GAPDH-206ENST00000466525 BRD4O60885 1362 aaPredicted RBP20.27■□□□□ 0.83
GAPDH-206ENST00000466525 C9orf84Q5VXU9 1444 aa20.26■□□□□ 0.83
GAPDH-206ENST00000466525 FER1L4A9Z1Z3 1794 aa20.26■□□□□ 0.83
GAPDH-206ENST00000466525 PNISRQ8TF01 805 aaKnown RBP20.26■□□□□ 0.83
GAPDH-206ENST00000466525 NOP58Q9Y2X3 529 aaKnown RBP20.26■□□□□ 0.83
GAPDH-206ENST00000466525 CDC42BPAQ5VT25 1732 aa20.26■□□□□ 0.83
GAPDH-206ENST00000466525 INSRP06213 1382 aa20.25■□□□□ 0.83
GAPDH-206ENST00000466525 SOCS7O14512 581 aa20.24■□□□□ 0.83
GAPDH-206ENST00000466525 ANKRD50Q9ULJ7 1429 aa20.24■□□□□ 0.83
GAPDH-206ENST00000466525 DISP3Q9P2K9 1392 aa20.24■□□□□ 0.83
GAPDH-206ENST00000466525 CFDP1Q9UEE9 299 aaPredicted RBP20.23■□□□□ 0.83
GAPDH-206ENST00000466525 SETD1BQ9UPS6 1966 aaKnown RBP20.22■□□□□ 0.83
GAPDH-206ENST00000466525 PREX1Q8TCU6 1659 aa20.22■□□□□ 0.83
GAPDH-206ENST00000466525 ARHGEF5Q12774 1597 aa20.22■□□□□ 0.83
GAPDH-206ENST00000466525 RALBP1Q15311 655 aa20.21■□□□□ 0.83
GAPDH-206ENST00000466525 LAMC1P11047 1609 aa20.2■□□□□ 0.82
GAPDH-206ENST00000466525 PKD2Q13563 968 aa20.19■□□□□ 0.82
GAPDH-206ENST00000466525 CCDC136Q96JN2 1154 aa20.19■□□□□ 0.82
GAPDH-206ENST00000466525 MYBBP1AQ9BQG0 1328 aaKnown RBP20.18■□□□□ 0.82
GAPDH-206ENST00000466525 ZNF518AQ6AHZ1 1483 aa20.17■□□□□ 0.82
GAPDH-206ENST00000466525 SIGLEC1Q9BZZ2 1709 aa20.17■□□□□ 0.82
GAPDH-206ENST00000466525 PTPRTO14522 1441 aa20.16■□□□□ 0.82
GAPDH-206ENST00000466525 IPO9Q96P70 1041 aaKnown RBP20.16■□□□□ 0.82
GAPDH-206ENST00000466525 ANP32AP39687 249 aaKnown RBP20.15■□□□□ 0.82
GAPDH-206ENST00000466525 PDE3BQ13370 1112 aa20.15■□□□□ 0.82
GAPDH-206ENST00000466525 TMC1Q8TDI8 760 aa20.15■□□□□ 0.82
GAPDH-206ENST00000466525 CEBPAP49715 358 aaPredicted RBP20.14■□□□□ 0.81
GAPDH-206ENST00000466525 ESF1Q9H501 851 aaKnown RBP20.14■□□□□ 0.81
GAPDH-206ENST00000466525 TRPM1Q7Z4N2 1603 aa20.14■□□□□ 0.81
GAPDH-206ENST00000466525 ILDR2Q71H61 639 aa20.13■□□□□ 0.81
GAPDH-206ENST00000466525 WASHC2CQ9Y4E1 1318 aa20.11■□□□□ 0.81
GAPDH-206ENST00000466525 IQSEC2Q5JU85 1478 aa20.11■□□□□ 0.81
GAPDH-206ENST00000466525 DEKP35659 375 aaKnown RBP20.1■□□□□ 0.81
GAPDH-206ENST00000466525 PARD3Q8TEW0 1356 aa20.1■□□□□ 0.81
GAPDH-206ENST00000466525 MYO5CQ9NQX4 1742 aa20.1■□□□□ 0.81
GAPDH-206ENST00000466525 CARD11Q9BXL7 1154 aa20.1■□□□□ 0.81
GAPDH-206ENST00000466525 NUP155O75694 1391 aa20.1■□□□□ 0.81
GAPDH-206ENST00000466525 REREQ9P2R6 1566 aa20.09■□□□□ 0.81
GAPDH-206ENST00000466525 STRCQ7RTU9 1775 aa20.08■□□□□ 0.81
GAPDH-206ENST00000466525 TCERG1O14776 1098 aaKnown RBP20.07■□□□□ 0.8
GAPDH-206ENST00000466525 RRP1P56182 461 aaKnown RBP20.07■□□□□ 0.8
GAPDH-206ENST00000466525 GPRASP1Q5JY77 1395 aa20.07■□□□□ 0.8
GAPDH-206ENST00000466525 AFAP1Q8N556 730 aa20.07■□□□□ 0.8
GAPDH-206ENST00000466525 TRAPPC8Q9Y2L5 1435 aa20.06■□□□□ 0.8
GAPDH-206ENST00000466525 MAST1Q9Y2H9 1570 aa20.06■□□□□ 0.8
GAPDH-206ENST00000466525 PLEKHH2Q8IVE3 1493 aa20.06■□□□□ 0.8
GAPDH-206ENST00000466525 MS4A1P11836 297 aa20.06■□□□□ 0.8
GAPDH-206ENST00000466525 MLH3Q9UHC1 1453 aa20.06■□□□□ 0.8
GAPDH-206ENST00000466525 NLRP13Q86W25 1043 aa20.05■□□□□ 0.8
GAPDH-206ENST00000466525 UNC13BO14795 1591 aa20.05■□□□□ 0.8
GAPDH-206ENST00000466525 ARHGAP5Q13017 1502 aa20.05■□□□□ 0.8
GAPDH-206ENST00000466525 EIF2AK4Q9P2K8 1649 aaKnown RBP20.04■□□□□ 0.8
GAPDH-206ENST00000466525 AGLP35573 1532 aa20.04■□□□□ 0.8
GAPDH-206ENST00000466525 PRAG1Q86YV5 1406 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms