RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TK2O00142 265 aa7.82□□□□□ -1.16
SCFD1-204ENST00000463622 PTGER2P43116 358 aa7.81□□□□□ -1.16
SCFD1-204ENST00000463622 HAP1P54257 671 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-204ENST00000463622 NBR1Q14596 966 aa7.81□□□□□ -1.16
SCFD1-204ENST00000463622 ZBED2Q9BTP6 218 aa7.81□□□□□ -1.16
SCFD1-204ENST00000463622 SPDYE16A6NNV3 312 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-204ENST00000463622 KCNV2Q8TDN2 545 aa7.8□□□□□ -1.16
SCFD1-204ENST00000463622 PROX2Q3B8N5 592 aa7.8□□□□□ -1.16
SCFD1-204ENST00000463622 FBXW7Q969H0 707 aa7.8□□□□□ -1.16
SCFD1-204ENST00000463622 PRIM1P49642 420 aaKnown RBP7.79□□□□□ -1.16
SCFD1-204ENST00000463622 C6orf132Q5T0Z8 1188 aa7.79□□□□□ -1.16
SCFD1-204ENST00000463622 EPAS1Q99814 870 aa7.79□□□□□ -1.16
SCFD1-204ENST00000463622 ARIH1Q9Y4X5 557 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-204ENST00000463622 TSR1Q2NL82 804 aaKnown RBP7.78□□□□□ -1.16
SCFD1-204ENST00000463622 STAC3Q96MF2 364 aa7.78□□□□□ -1.16
SCFD1-204ENST00000463622 MAP3K7O43318 606 aa7.77□□□□□ -1.17
SCFD1-204ENST00000463622 PPP1R3GB7ZBB8 358 aa7.76□□□□□ -1.17
SCFD1-204ENST00000463622 KCTD12Q96CX2 325 aaKnown RBP7.76□□□□□ -1.17
SCFD1-204ENST00000463622 EN1Q05925 392 aaPredicted RBP7.76□□□□□ -1.17
SCFD1-204ENST00000463622 SLC4A5Q9BY07 1137 aa7.76□□□□□ -1.17
SCFD1-204ENST00000463622 BHMG1C9JSJ3 638 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-204ENST00000463622 MLLT3P42568 568 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-204ENST00000463622 ARHGEF1Q92888 912 aaKnown RBP7.74□□□□□ -1.17
SCFD1-204ENST00000463622 OSBPP22059 807 aa7.74□□□□□ -1.17
SCFD1-204ENST00000463622 KDM2AQ9Y2K7 1162 aa7.73□□□□□ -1.17
SCFD1-204ENST00000463622 CDHR5Q9HBB8 845 aa7.72□□□□□ -1.17
SCFD1-204ENST00000463622 KIAA1468Q9P260 1216 aa7.72□□□□□ -1.17
SCFD1-204ENST00000463622 MRPL50Q8N5N7 158 aaKnown RBP7.72□□□□□ -1.17
SCFD1-204ENST00000463622 RB1CC1Q8TDY2 1594 aa7.72□□□□□ -1.17
SCFD1-204ENST00000463622 GOLGA8CPA6NN73 597 aa7.7□□□□□ -1.18
SCFD1-204ENST00000463622 PTPN5P54829 565 aa7.7□□□□□ -1.18
SCFD1-204ENST00000463622 SEPT9Q9UHD8 586 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-204ENST00000463622 RABGEF1Q9UJ41 708 aa7.7□□□□□ -1.18
SCFD1-204ENST00000463622 SEMA3EO15041 775 aa7.69□□□□□ -1.18
SCFD1-204ENST00000463622 NBPF3Q9H094 633 aa7.69□□□□□ -1.18
SCFD1-204ENST00000463622 TRIM6-TRIM34B2RNG4 842 aa7.68□□□□□ -1.18
SCFD1-204ENST00000463622 TSKSQ9UJT2 592 aa7.68□□□□□ -1.18
SCFD1-204ENST00000463622 WNT2BQ93097 391 aa7.68□□□□□ -1.18
SCFD1-204ENST00000463622 HCSTQ9UBK5 93 aa7.68□□□□□ -1.18
SCFD1-204ENST00000463622 P3H3Q8IVL6 736 aa7.67□□□□□ -1.18
SCFD1-204ENST00000463622 FAM198AQ9UFP1 575 aa7.67□□□□□ -1.18
SCFD1-204ENST00000463622 SMAPO00193 183 aa7.66□□□□□ -1.18
SCFD1-204ENST00000463622 CDCA7LQ96GN5 454 aa7.66□□□□□ -1.18
SCFD1-204ENST00000463622 C3orf80F5H4A9 247 aa7.66□□□□□ -1.18
SCFD1-204ENST00000463622 THSD4Q6ZMP0 1018 aa7.65□□□□□ -1.18
SCFD1-204ENST00000463622 NACADO15069 1562 aa7.65□□□□□ -1.19
SCFD1-204ENST00000463622 PRSS12P56730 875 aa7.64□□□□□ -1.19
SCFD1-204ENST00000463622 NPDC1Q9NQX5 325 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-204ENST00000463622 BCAMP50895 628 aa7.63□□□□□ -1.19
SCFD1-204ENST00000463622 ZFRQ96KR1 1074 aaKnown RBP7.63□□□□□ -1.19
SCFD1-204ENST00000463622 ONECUT3O60422 494 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-204ENST00000463622 PACS2Q86VP3 889 aa7.62□□□□□ -1.19
SCFD1-204ENST00000463622 NUTM2FA1L443 756 aa7.61□□□□□ -1.19
SCFD1-204ENST00000463622 ANKK1Q8NFD2 765 aa7.61□□□□□ -1.19
SCFD1-204ENST00000463622 CERKQ8TCT0 537 aa7.61□□□□□ -1.19
SCFD1-204ENST00000463622 PADI6Q6TGC4 694 aa7.6□□□□□ -1.19
SCFD1-204ENST00000463622 LAPTM4BQ86VI4 370 aa7.6□□□□□ -1.19
SCFD1-204ENST00000463622 PNMA3Q9UL41 463 aa7.6□□□□□ -1.19
SCFD1-204ENST00000463622 FAM98CQ17RN3 349 aaKnown RBP7.6□□□□□ -1.19
SCFD1-204ENST00000463622 TATDN2Q93075 761 aa7.6□□□□□ -1.19
SCFD1-204ENST00000463622 PLA2G2EQ9NZK7 142 aa7.6□□□□□ -1.19
SCFD1-204ENST00000463622 NUDT18Q6ZVK8 323 aa7.59□□□□□ -1.19
SCFD1-204ENST00000463622 VSIG10Q8N0Z9 540 aa7.59□□□□□ -1.19
SCFD1-204ENST00000463622 RBM26Q5T8P6 1007 aaKnown RBP7.58□□□□□ -1.2
SCFD1-204ENST00000463622 TESPA1A2RU30 521 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-204ENST00000463622 SOWAHBA6NEL2 793 aa7.58□□□□□ -1.2
SCFD1-204ENST00000463622 PTGDRQ13258 359 aa7.57□□□□□ -1.2
SCFD1-204ENST00000463622 WBP1LQ9NX94 342 aa7.56□□□□□ -1.2
SCFD1-204ENST00000463622 FAM161AQ3B820 660 aa7.56□□□□□ -1.2
SCFD1-204ENST00000463622 SAMD7Q7Z3H4 446 aa7.56□□□□□ -1.2
SCFD1-204ENST00000463622 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-204ENST00000463622 NBPF26B4DH59 902 aa7.55□□□□□ -1.2
SCFD1-204ENST00000463622 TTC13Q8NBP0 860 aa7.55□□□□□ -1.2
SCFD1-204ENST00000463622 LRCH3Q96II8 777 aa7.55□□□□□ -1.2
SCFD1-204ENST00000463622 HPS5Q9UPZ3 1129 aa7.54□□□□□ -1.2
SCFD1-204ENST00000463622 RBM27Q9P2N5 1060 aaKnown RBP7.54□□□□□ -1.2
SCFD1-204ENST00000463622 BICRAQ9NZM4 1560 aa7.53□□□□□ -1.2
SCFD1-204ENST00000463622 RNF40O75150 1001 aa7.52□□□□□ -1.21
SCFD1-204ENST00000463622 MYO15BQ96JP2 1530 aa7.51□□□□□ -1.21
SCFD1-204ENST00000463622 TSR3Q9UJK0 312 aaKnown RBP7.51□□□□□ -1.21
SCFD1-204ENST00000463622 FECHP22830 423 aa7.5□□□□□ -1.21
SCFD1-204ENST00000463622 SMYD5Q6GMV2 418 aa7.5□□□□□ -1.21
SCFD1-204ENST00000463622 EYA1Q99502 592 aa7.5□□□□□ -1.21
SCFD1-204ENST00000463622 FCHSD2O94868 740 aa7.5□□□□□ -1.21
SCFD1-204ENST00000463622 PPP4CP60510 307 aa7.5□□□□□ -1.21
SCFD1-204ENST00000463622 SWT1Q5T5J6 900 aaKnown RBP7.5□□□□□ -1.21
SCFD1-204ENST00000463622 ADGRG1Q9Y653 693 aa7.48□□□□□ -1.21
SCFD1-204ENST00000463622 HDGFP51858 240 aaKnown RBP7.48□□□□□ -1.21
SCFD1-204ENST00000463622 CECR2Q9BXF3 1484 aa7.47□□□□□ -1.21
SCFD1-204ENST00000463622 GPR37O15354 613 aa7.46□□□□□ -1.22
SCFD1-204ENST00000463622 HIC1Q14526 733 aa7.45□□□□□ -1.22
SCFD1-204ENST00000463622 RBM46Q8TBY0 533 aaKnown RBP7.45□□□□□ -1.22
SCFD1-204ENST00000463622 RCCD1A6NED2 376 aa7.44□□□□□ -1.22
SCFD1-204ENST00000463622 GNPATO15228 680 aa7.44□□□□□ -1.22
SCFD1-204ENST00000463622 APLP1P51693 650 aa7.44□□□□□ -1.22
SCFD1-204ENST00000463622 NYAP1Q6ZVC0 841 aa7.44□□□□□ -1.22
SCFD1-204ENST00000463622 GPIHBP1Q8IV16 184 aa7.44□□□□□ -1.22
SCFD1-204ENST00000463622 NLRP7Q8WX94 980 aa7.44□□□□□ -1.22
SCFD1-204ENST00000463622 UNC13AQ9UPW8 1703 aa7.43□□□□□ -1.22
SCFD1-204ENST00000463622 SHROOM4Q9ULL8 1493 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms