RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 PCDHGA10Q9Y5H3 936 aa6.95□□□□□ -1.3
CNOT11-203ENST00000462489 SEMA3EO15041 775 aa6.94□□□□□ -1.3
CNOT11-203ENST00000462489 ZDHHC16Q969W1 377 aa6.94□□□□□ -1.3
CNOT11-203ENST00000462489 SMYD5Q6GMV2 418 aa6.93□□□□□ -1.3
CNOT11-203ENST00000462489 DDX12PQ92771 950 aa6.93□□□□□ -1.3
CNOT11-203ENST00000462489 BCL2L12Q9HB09 334 aa6.93□□□□□ -1.3
CNOT11-203ENST00000462489 OSBPP22059 807 aa6.92□□□□□ -1.3
CNOT11-203ENST00000462489 MLLT3P42568 568 aaPredicted RBP6.92□□□□□ -1.3
CNOT11-203ENST00000462489 TK2O00142 265 aa6.91□□□□□ -1.3
CNOT11-203ENST00000462489 NBR1Q14596 966 aa6.91□□□□□ -1.3
CNOT11-203ENST00000462489 KCNK17Q96T54 332 aa6.91□□□□□ -1.3
CNOT11-203ENST00000462489 GRXCR2A6NFK2 248 aa6.9□□□□□ -1.3
CNOT11-203ENST00000462489 EN1Q05925 392 aaPredicted RBP6.9□□□□□ -1.3
CNOT11-203ENST00000462489 ADAM33Q9BZ11 813 aa6.9□□□□□ -1.3
CNOT11-203ENST00000462489 TULP1O00294 542 aaPredicted RBP6.88□□□□□ -1.31
CNOT11-203ENST00000462489 PTPREP23469 700 aa6.88□□□□□ -1.31
CNOT11-203ENST00000462489 KCTD12Q96CX2 325 aaKnown RBP6.88□□□□□ -1.31
CNOT11-203ENST00000462489 PRIM1P49642 420 aaKnown RBP6.87□□□□□ -1.31
CNOT11-203ENST00000462489 C6orf132Q5T0Z8 1188 aa6.87□□□□□ -1.31
CNOT11-203ENST00000462489 BCANQ96GW7 911 aa6.87□□□□□ -1.31
CNOT11-203ENST00000462489 KCNH8Q96L42 1107 aa6.87□□□□□ -1.31
CNOT11-203ENST00000462489 SLC4A5Q9BY07 1137 aa6.86□□□□□ -1.31
CNOT11-203ENST00000462489 VPS9D1Q9Y2B5 631 aa6.86□□□□□ -1.31
CNOT11-203ENST00000462489 PPP1R3GB7ZBB8 358 aa6.85□□□□□ -1.31
CNOT11-203ENST00000462489 MAP3K7O43318 606 aa6.85□□□□□ -1.31
CNOT11-203ENST00000462489 CERKQ8TCT0 537 aa6.85□□□□□ -1.31
CNOT11-203ENST00000462489 RBM33Q96EV2 1170 aaKnown RBP6.85□□□□□ -1.31
CNOT11-203ENST00000462489 ONECUT3O60422 494 aaPredicted RBP6.83□□□□□ -1.32
CNOT11-203ENST00000462489 TSR1Q2NL82 804 aaKnown RBP6.83□□□□□ -1.32
CNOT11-203ENST00000462489 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.83□□□□□ -1.32
CNOT11-203ENST00000462489 ZBED2Q9BTP6 218 aa6.83□□□□□ -1.32
CNOT11-203ENST00000462489 COL9A1P20849 921 aa6.82□□□□□ -1.32
CNOT11-203ENST00000462489 PTPN5P54829 565 aa6.82□□□□□ -1.32
CNOT11-203ENST00000462489 NPDC1Q9NQX5 325 aaPredicted RBP6.82□□□□□ -1.32
CNOT11-203ENST00000462489 BHMG1C9JSJ3 638 aaPredicted RBP6.81□□□□□ -1.32
CNOT11-203ENST00000462489 RBM26Q5T8P6 1007 aaKnown RBP6.81□□□□□ -1.32
CNOT11-203ENST00000462489 RBM27Q9P2N5 1060 aaKnown RBP6.81□□□□□ -1.32
CNOT11-203ENST00000462489 PTGDRQ13258 359 aa6.8□□□□□ -1.32
CNOT11-203ENST00000462489 FCHSD2O94868 740 aa6.79□□□□□ -1.32
CNOT11-203ENST00000462489 CDHR5Q9HBB8 845 aa6.79□□□□□ -1.32
CNOT11-203ENST00000462489 NUTM2FA1L443 756 aa6.78□□□□□ -1.32
CNOT11-203ENST00000462489 PRSS12P56730 875 aa6.78□□□□□ -1.32
CNOT11-203ENST00000462489 LMOD2Q6P5Q4 547 aa6.78□□□□□ -1.32
CNOT11-203ENST00000462489 TTC13Q8NBP0 860 aa6.78□□□□□ -1.32
CNOT11-203ENST00000462489 TRIM6-TRIM34B2RNG4 842 aa6.77□□□□□ -1.33
CNOT11-203ENST00000462489 GPR37O15354 613 aa6.77□□□□□ -1.33
CNOT11-203ENST00000462489 HIC1Q14526 733 aa6.77□□□□□ -1.33
CNOT11-203ENST00000462489 PROX2Q3B8N5 592 aa6.77□□□□□ -1.33
CNOT11-203ENST00000462489 GPIHBP1Q8IV16 184 aa6.77□□□□□ -1.33
CNOT11-203ENST00000462489 CDCA7LQ96GN5 454 aa6.77□□□□□ -1.33
CNOT11-203ENST00000462489 STAC3Q96MF2 364 aa6.77□□□□□ -1.33
CNOT11-203ENST00000462489 RABGEF1Q9UJ41 708 aa6.77□□□□□ -1.33
CNOT11-203ENST00000462489 IFFO2Q5TF58 517 aa6.76□□□□□ -1.33
CNOT11-203ENST00000462489 THSD4Q6ZMP0 1018 aa6.76□□□□□ -1.33
CNOT11-203ENST00000462489 PACS2Q86VP3 889 aa6.75□□□□□ -1.33
CNOT11-203ENST00000462489 GNPATO15228 680 aa6.74□□□□□ -1.33
CNOT11-203ENST00000462489 MRPL50Q8N5N7 158 aaKnown RBP6.74□□□□□ -1.33
CNOT11-203ENST00000462489 TSKSQ9UJT2 592 aa6.74□□□□□ -1.33
CNOT11-203ENST00000462489 LAPTM4BQ86VI4 370 aa6.73□□□□□ -1.33
CNOT11-203ENST00000462489 NBPF3Q9H094 633 aa6.73□□□□□ -1.33
CNOT11-203ENST00000462489 KIAA1468Q9P260 1216 aa6.73□□□□□ -1.33
CNOT11-203ENST00000462489 A0A0G2JS52 829 aa6.72□□□□□ -1.33
CNOT11-203ENST00000462489 PADI6Q6TGC4 694 aa6.72□□□□□ -1.33
CNOT11-203ENST00000462489 FAM198AQ9UFP1 575 aa6.72□□□□□ -1.33
CNOT11-203ENST00000462489 NBPF26B4DH59 902 aa6.71□□□□□ -1.34
CNOT11-203ENST00000462489 RGS20O76081 388 aa6.71□□□□□ -1.34
CNOT11-203ENST00000462489 ZC3H15Q8WU90 426 aaKnown RBP6.71□□□□□ -1.34
CNOT11-203ENST00000462489 WNT2BQ93097 391 aa6.71□□□□□ -1.34
CNOT11-203ENST00000462489 ZMYND10O75800 440 aa6.7□□□□□ -1.34
CNOT11-203ENST00000462489 TATDN2Q93075 761 aa6.7□□□□□ -1.34
CNOT11-203ENST00000462489 IRX2Q9BZI1 471 aaPredicted RBP6.7□□□□□ -1.34
CNOT11-203ENST00000462489 GOLGA8CPA6NN73 597 aa6.69□□□□□ -1.34
CNOT11-203ENST00000462489 BARGINQ6ZT62 677 aa6.69□□□□□ -1.34
CNOT11-203ENST00000462489 ADGRG1Q9Y653 693 aa6.69□□□□□ -1.34
CNOT11-203ENST00000462489 MINK1Q8N4C8 1332 aaPredicted RBP6.69□□□□□ -1.34
CNOT11-203ENST00000462489 OATP04181 439 aa6.68□□□□□ -1.34
CNOT11-203ENST00000462489 MAP2K5Q13163 448 aa6.68□□□□□ -1.34
CNOT11-203ENST00000462489 FAM98CQ17RN3 349 aaKnown RBP6.68□□□□□ -1.34
CNOT11-203ENST00000462489 EYA1Q99502 592 aa6.68□□□□□ -1.34
CNOT11-203ENST00000462489 SEPT9Q9UHD8 586 aaPredicted RBP6.68□□□□□ -1.34
CNOT11-203ENST00000462489 FECHP22830 423 aa6.67□□□□□ -1.34
CNOT11-203ENST00000462489 NUDT18Q6ZVK8 323 aa6.67□□□□□ -1.34
CNOT11-203ENST00000462489 RBM46Q8TBY0 533 aaKnown RBP6.67□□□□□ -1.34
CNOT11-203ENST00000462489 PNMA3Q9UL41 463 aa6.67□□□□□ -1.34
CNOT11-203ENST00000462489 C3orf80F5H4A9 247 aa6.66□□□□□ -1.34
CNOT11-203ENST00000462489 BCAMP50895 628 aa6.66□□□□□ -1.34
CNOT11-203ENST00000462489 ZFRQ96KR1 1074 aaKnown RBP6.66□□□□□ -1.34
CNOT11-203ENST00000462489 IRF6O14896 467 aa6.65□□□□□ -1.34
CNOT11-203ENST00000462489 ANKK1Q8NFD2 765 aa6.65□□□□□ -1.34
CNOT11-203ENST00000462489 PXYLP1Q8TE99 480 aa6.65□□□□□ -1.34
CNOT11-203ENST00000462489 METTL3Q86U44 580 aaKnown RBP6.64□□□□□ -1.35
CNOT11-203ENST00000462489 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.63□□□□□ -1.35
CNOT11-203ENST00000462489 SOWAHBA6NEL2 793 aa6.63□□□□□ -1.35
CNOT11-203ENST00000462489 SMAPO00193 183 aa6.63□□□□□ -1.35
CNOT11-203ENST00000462489 DNAJB2P25686 324 aa6.63□□□□□ -1.35
CNOT11-203ENST00000462489 ITGBL1O95965 494 aaPredicted RBP6.62□□□□□ -1.35
CNOT11-203ENST00000462489 KRI1Q8N9T8 703 aaKnown RBP6.62□□□□□ -1.35
CNOT11-203ENST00000462489 RCCD1A6NED2 376 aa6.61□□□□□ -1.35
CNOT11-203ENST00000462489 HDGFP51858 240 aaKnown RBP6.61□□□□□ -1.35
CNOT11-203ENST00000462489 FAM161AQ3B820 660 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms