RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 PBXIP1Q96AQ6 731 aa11.32□□□□□ -0.6
LRCH3-210ENST00000461674 ATP1B4Q9UN42 357 aaPredicted RBP11.32□□□□□ -0.6
LRCH3-210ENST00000461674 SNRKQ9NRH2 765 aa11.31□□□□□ -0.6
LRCH3-210ENST00000461674 DSG2Q14126 1118 aa11.3□□□□□ -0.6
LRCH3-210ENST00000461674 SND1Q7KZF4 910 aaKnown RBP eCLIP11.3□□□□□ -0.6
LRCH3-210ENST00000461674 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
LRCH3-210ENST00000461674 GPCPD1Q9NPB8 672 aa11.3□□□□□ -0.6
LRCH3-210ENST00000461674 GLMNQ92990 594 aa11.29□□□□□ -0.6
LRCH3-210ENST00000461674 RBM42Q9BTD8 480 aaKnown RBP11.29□□□□□ -0.6
LRCH3-210ENST00000461674 MYT1LQ9UL68 1186 aa11.29□□□□□ -0.6
LRCH3-210ENST00000461674 CSB-PGBD3P0DP91 1061 aa11.27□□□□□ -0.61
LRCH3-210ENST00000461674 MAP3K13O43283 966 aa11.26□□□□□ -0.61
LRCH3-210ENST00000461674 SSTR3P32745 418 aaPredicted RBP11.26□□□□□ -0.61
LRCH3-210ENST00000461674 RFC5P40937 340 aa11.26□□□□□ -0.61
LRCH3-210ENST00000461674 PTGDRQ13258 359 aa11.26□□□□□ -0.61
LRCH3-210ENST00000461674 POLR3EQ9NVU0 708 aa11.26□□□□□ -0.61
LRCH3-210ENST00000461674 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
LRCH3-210ENST00000461674 BEGAINQ9BUH8 593 aa11.25□□□□□ -0.61
LRCH3-210ENST00000461674 TBC1D12O60347 775 aa11.24□□□□□ -0.61
LRCH3-210ENST00000461674 FOXK1P85037 733 aa11.24□□□□□ -0.61
LRCH3-210ENST00000461674 GDPD2Q9HCC8 539 aa11.24□□□□□ -0.61
LRCH3-210ENST00000461674 CLK2P49760 499 aaKnown RBP11.23□□□□□ -0.61
LRCH3-210ENST00000461674 MDM2Q00987 491 aaPredicted RBP11.23□□□□□ -0.61
LRCH3-210ENST00000461674 GOLGA2Q08379 1002 aa11.23□□□□□ -0.61
LRCH3-210ENST00000461674 TMEM259Q4ZIN3 620 aa11.23□□□□□ -0.61
LRCH3-210ENST00000461674 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
LRCH3-210ENST00000461674 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
LRCH3-210ENST00000461674 PTGER2P43116 358 aa11.22□□□□□ -0.61
LRCH3-210ENST00000461674 KIF12Q96FN5 646 aa11.22□□□□□ -0.61
LRCH3-210ENST00000461674 IGSF5Q9NSI5 407 aa11.22□□□□□ -0.61
LRCH3-210ENST00000461674 POM121CA8CG34 1229 aa11.21□□□□□ -0.61
LRCH3-210ENST00000461674 SOCS7O14512 581 aa11.21□□□□□ -0.61
LRCH3-210ENST00000461674 NISCHQ9Y2I1 1504 aa11.2□□□□□ -0.62
LRCH3-210ENST00000461674 MAP3K9P80192 1104 aa11.2□□□□□ -0.62
LRCH3-210ENST00000461674 MTMR14Q8NCE2 650 aa11.2□□□□□ -0.62
LRCH3-210ENST00000461674 UNCXA6NJT0 531 aa11.19□□□□□ -0.62
LRCH3-210ENST00000461674 PRM3Q9NNZ6 103 aa11.19□□□□□ -0.62
LRCH3-210ENST00000461674 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.18□□□□□ -0.62
LRCH3-210ENST00000461674 PITPNM1O00562 1244 aa11.18□□□□□ -0.62
LRCH3-210ENST00000461674 CHADLQ6NUI6 762 aa11.18□□□□□ -0.62
LRCH3-210ENST00000461674 FAM177A1Q8N128 213 aaPredicted RBP11.18□□□□□ -0.62
LRCH3-210ENST00000461674 ABL2P42684 1182 aa11.17□□□□□ -0.62
LRCH3-210ENST00000461674 PPP2R2DQ66LE6 453 aa11.17□□□□□ -0.62
LRCH3-210ENST00000461674 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
LRCH3-210ENST00000461674 RBM47A0AV96 593 aaKnown RBP11.16□□□□□ -0.62
LRCH3-210ENST00000461674 PAK3O75914 559 aaPredicted RBP11.16□□□□□ -0.62
LRCH3-210ENST00000461674 SRPK2P78362 688 aaKnown RBP11.16□□□□□ -0.62
LRCH3-210ENST00000461674 TMC2Q8TDI7 906 aa11.16□□□□□ -0.62
LRCH3-210ENST00000461674 CFAP70Q5T0N1 1121 aa11.14□□□□□ -0.63
LRCH3-210ENST00000461674 PLPP6Q8IY26 295 aa11.14□□□□□ -0.63
LRCH3-210ENST00000461674 DDX12PQ92771 950 aa11.14□□□□□ -0.63
LRCH3-210ENST00000461674 PRIM1P49642 420 aaKnown RBP11.13□□□□□ -0.63
LRCH3-210ENST00000461674 RFX1P22670 979 aa11.12□□□□□ -0.63
LRCH3-210ENST00000461674 DIXDC1Q155Q3 683 aa11.12□□□□□ -0.63
LRCH3-210ENST00000461674 PHOX2BQ99453 314 aa11.12□□□□□ -0.63
LRCH3-210ENST00000461674 CHMP4AQ9BY43 222 aa11.12□□□□□ -0.63
LRCH3-210ENST00000461674 VRTNQ9H8Y1 702 aa11.12□□□□□ -0.63
LRCH3-210ENST00000461674 CCDC125Q86Z20 511 aa11.11□□□□□ -0.63
LRCH3-210ENST00000461674 TBC1D2BQ9UPU7 963 aa11.11□□□□□ -0.63
LRCH3-210ENST00000461674 GNEQ9Y223 722 aaKnown RBP11.11□□□□□ -0.63
LRCH3-210ENST00000461674 FBXO31Q5XUX0 539 aaPredicted RBP11.1□□□□□ -0.63
LRCH3-210ENST00000461674 ILDR1Q86SU0 546 aaPredicted RBP11.1□□□□□ -0.63
LRCH3-210ENST00000461674 CARNS1A5YM72 827 aa11.09□□□□□ -0.63
LRCH3-210ENST00000461674 TBC1D2Q9BYX2 928 aa11.08□□□□□ -0.64
LRCH3-210ENST00000461674 HDGFL1Q5TGJ6 251 aa11.07□□□□□ -0.64
LRCH3-210ENST00000461674 ADAMTS19Q8TE59 1207 aa11.07□□□□□ -0.64
LRCH3-210ENST00000461674 TMEM106CQ9BVX2 250 aa11.07□□□□□ -0.64
LRCH3-210ENST00000461674 TMEM88BA6NKF7 163 aa11.05□□□□□ -0.64
LRCH3-210ENST00000461674 PPP1R12CQ9BZL4 782 aa11.05□□□□□ -0.64
LRCH3-210ENST00000461674 LIMD1Q9UGP4 676 aa11.05□□□□□ -0.64
LRCH3-210ENST00000461674 ERCC3P19447 782 aa11.04□□□□□ -0.64
LRCH3-210ENST00000461674 TUSC1Q2TAM9 212 aa11.04□□□□□ -0.64
LRCH3-210ENST00000461674 B4GALNT3Q6L9W6 998 aa11.04□□□□□ -0.64
LRCH3-210ENST00000461674 CANXP27824 592 aaKnown RBP11.03□□□□□ -0.64
LRCH3-210ENST00000461674 MICALL2Q8IY33 904 aa11.03□□□□□ -0.64
LRCH3-210ENST00000461674 UPF1Q92900 1129 aaKnown RBP eCLIP11.03□□□□□ -0.64
LRCH3-210ENST00000461674 NPDC1Q9NQX5 325 aaPredicted RBP11.03□□□□□ -0.64
LRCH3-210ENST00000461674 KIAA1522Q9P206 1035 aaPredicted RBP11.03□□□□□ -0.64
LRCH3-210ENST00000461674 ATG7O95352 703 aa11.02□□□□□ -0.65
LRCH3-210ENST00000461674 MRRFQ96E11 262 aaKnown RBP11.02□□□□□ -0.65
LRCH3-210ENST00000461674 WASHC4Q2M389 1173 aa11.01□□□□□ -0.65
LRCH3-210ENST00000461674 TXNDC2Q86VQ3 553 aa11.01□□□□□ -0.65
LRCH3-210ENST00000461674 CDHR5Q9HBB8 845 aa11.01□□□□□ -0.65
LRCH3-210ENST00000461674 METTL3Q86U44 580 aaKnown RBP11□□□□□ -0.65
LRCH3-210ENST00000461674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11□□□□□ -0.652e-11■■□□□ 11.6
LRCH3-210ENST00000461674 C2orf72A6NCS6 295 aa10.99□□□□□ -0.65
LRCH3-210ENST00000461674 KIF3CO14782 793 aa10.99□□□□□ -0.65
LRCH3-210ENST00000461674 RIC3Q7Z5B4 369 aa10.99□□□□□ -0.65
LRCH3-210ENST00000461674 NDUFB9Q9Y6M9 179 aa10.99□□□□□ -0.65
LRCH3-210ENST00000461674 PALM3A6NDB9 673 aaPredicted RBP10.98□□□□□ -0.65
LRCH3-210ENST00000461674 OATP04181 439 aa10.97□□□□□ -0.65
LRCH3-210ENST00000461674 EN1Q05925 392 aaPredicted RBP10.97□□□□□ -0.65
LRCH3-210ENST00000461674 LMOD1P29536 600 aaPredicted RBP10.96□□□□□ -0.65
LRCH3-210ENST00000461674 EVI5O60447 810 aa10.95□□□□□ -0.66
LRCH3-210ENST00000461674 USP17L8P0C7I0 530 aa10.95□□□□□ -0.66
LRCH3-210ENST00000461674 DNAJC14Q6Y2X3 702 aaPredicted RBP10.95□□□□□ -0.66
LRCH3-210ENST00000461674 ZNF710Q8N1W2 664 aa10.95□□□□□ -0.66
LRCH3-210ENST00000461674 CCER1Q8TC90 406 aaPredicted RBP10.95□□□□□ -0.66
LRCH3-210ENST00000461674 C8orf37Q96NL8 207 aa10.95□□□□□ -0.66
LRCH3-210ENST00000461674 SPTLC1O15269 473 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms