RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 GPR37O15354 613 aa9.98□□□□□ -0.81
PRPF4B-202ENST00000461612 PRKCSHP14314 528 aaPredicted RBP9.98□□□□□ -0.81
PRPF4B-202ENST00000461612 PTPREP23469 700 aa9.98□□□□□ -0.81
PRPF4B-202ENST00000461612 VARS2Q5ST30 1063 aaKnown RBP9.98□□□□□ -0.81
PRPF4B-202ENST00000461612 LCE2DQ5TA82 110 aaPredicted RBP9.98□□□□□ -0.81
PRPF4B-202ENST00000461612 BARGINQ6ZT62 677 aa9.98□□□□□ -0.81
PRPF4B-202ENST00000461612 FAM205CA6NFA0 338 aa9.97□□□□□ -0.81
PRPF4B-202ENST00000461612 GNPATO15228 680 aa9.97□□□□□ -0.81
PRPF4B-202ENST00000461612 TSR1Q2NL82 804 aaKnown RBP9.97□□□□□ -0.81
PRPF4B-202ENST00000461612 KCNH8Q96L42 1107 aa9.97□□□□□ -0.81
PRPF4B-202ENST00000461612 ZNF687Q8N1G0 1237 aa9.96□□□□□ -0.82
PRPF4B-202ENST00000461612 NPDC1Q9NQX5 325 aaPredicted RBP9.96□□□□□ -0.82
PRPF4B-202ENST00000461612 PBX2P40425 430 aa9.95□□□□□ -0.82
PRPF4B-202ENST00000461612 CDHR5Q9HBB8 845 aa9.95□□□□□ -0.82
PRPF4B-202ENST00000461612 HS3ST6Q96QI5 342 aa9.94□□□□□ -0.82
PRPF4B-202ENST00000461612 RBM27Q9P2N5 1060 aaKnown RBP9.94□□□□□ -0.82
PRPF4B-202ENST00000461612 PPP1R3GB7ZBB8 358 aa9.93□□□□□ -0.82
PRPF4B-202ENST00000461612 MINK1Q8N4C8 1332 aaPredicted RBP9.92□□□□□ -0.82
PRPF4B-202ENST00000461612 ARHGAP33O14559 1287 aa9.92□□□□□ -0.82
PRPF4B-202ENST00000461612 KRI1Q8N9T8 703 aaKnown RBP9.91□□□□□ -0.82
PRPF4B-202ENST00000461612 ONECUT3O60422 494 aaPredicted RBP9.9□□□□□ -0.82
PRPF4B-202ENST00000461612 MAP2K5Q13163 448 aa9.9□□□□□ -0.82
PRPF4B-202ENST00000461612 PRSS12P56730 875 aa9.89□□□□□ -0.83
PRPF4B-202ENST00000461612 KCNK17Q96T54 332 aa9.89□□□□□ -0.83
PRPF4B-202ENST00000461612 COL9A1P20849 921 aa9.88□□□□□ -0.83
PRPF4B-202ENST00000461612 AK7Q96M32 723 aa9.88□□□□□ -0.83
PRPF4B-202ENST00000461612 SLC4A5Q9BY07 1137 aa9.88□□□□□ -0.83
PRPF4B-202ENST00000461612 POTEB3A0JP26 581 aa9.87□□□□□ -0.83
PRPF4B-202ENST00000461612 IRF6O14896 467 aa9.87□□□□□ -0.83
PRPF4B-202ENST00000461612 POTEBQ6S5H4 581 aa9.87□□□□□ -0.83
PRPF4B-202ENST00000461612 POTEEQ6S8J3 1075 aa9.87□□□□□ -0.83
PRPF4B-202ENST00000461612 TTC13Q8NBP0 860 aa9.87□□□□□ -0.83
PRPF4B-202ENST00000461612 CDCA7LQ96GN5 454 aa9.87□□□□□ -0.83
PRPF4B-202ENST00000461612 SLC24A3Q9HC58 644 aa9.87□□□□□ -0.83
PRPF4B-202ENST00000461612 FECHP22830 423 aa9.85□□□□□ -0.83
PRPF4B-202ENST00000461612 PSEN2P49810 448 aa9.85□□□□□ -0.83
PRPF4B-202ENST00000461612 PADI6Q6TGC4 694 aa9.85□□□□□ -0.83
PRPF4B-202ENST00000461612 TRIM6-TRIM34B2RNG4 842 aa9.84□□□□□ -0.83
PRPF4B-202ENST00000461612 ZBED2Q9BTP6 218 aa9.84□□□□□ -0.83
PRPF4B-202ENST00000461612 OATP04181 439 aa9.83□□□□□ -0.84
PRPF4B-202ENST00000461612 PACS2Q86VP3 889 aa9.83□□□□□ -0.84
PRPF4B-202ENST00000461612 TK2O00142 265 aa9.82□□□□□ -0.84
PRPF4B-202ENST00000461612 AXIN2Q9Y2T1 843 aa9.82□□□□□ -0.84
PRPF4B-202ENST00000461612 CCDC102AQ96A19 550 aa9.81□□□□□ -0.84
PRPF4B-202ENST00000461612 TSKSQ9UJT2 592 aa9.81□□□□□ -0.84
PRPF4B-202ENST00000461612 DMRTA1Q5VZB9 504 aa9.8□□□□□ -0.84
PRPF4B-202ENST00000461612 ADGRG1Q9Y653 693 aa9.8□□□□□ -0.84
PRPF4B-202ENST00000461612 NBPF26B4DH59 902 aa9.79□□□□□ -0.84
PRPF4B-202ENST00000461612 TRIM66O15016 1216 aa9.79□□□□□ -0.84
PRPF4B-202ENST00000461612 RBM46Q8TBY0 533 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-202ENST00000461612 FAM198AQ9UFP1 575 aa9.79□□□□□ -0.84
PRPF4B-202ENST00000461612 RABGEF1Q9UJ41 708 aa9.79□□□□□ -0.84
PRPF4B-202ENST00000461612 LSM11P83369 360 aaKnown RBP eCLIP9.78□□□□□ -0.841e-7■□□□□ 8.1
PRPF4B-202ENST00000461612 PROX2Q3B8N5 592 aa9.78□□□□□ -0.84
PRPF4B-202ENST00000461612 POTEGQ6S5H5 508 aa9.78□□□□□ -0.84
PRPF4B-202ENST00000461612 VPS9D1Q9Y2B5 631 aa9.78□□□□□ -0.84
PRPF4B-202ENST00000461612 POTEMA6NI47 508 aa9.77□□□□□ -0.85
PRPF4B-202ENST00000461612 TATDN2Q93075 761 aa9.77□□□□□ -0.85
PRPF4B-202ENST00000461612 KIAA1468Q9P260 1216 aa9.77□□□□□ -0.85
PRPF4B-202ENST00000461612 PXYLP1Q8TE99 480 aa9.76□□□□□ -0.85
PRPF4B-202ENST00000461612 PNMA3Q9UL41 463 aa9.76□□□□□ -0.85
PRPF4B-202ENST00000461612 AMHR2Q16671 573 aa9.75□□□□□ -0.85
PRPF4B-202ENST00000461612 METTL3Q86U44 580 aaKnown RBP9.75□□□□□ -0.85
PRPF4B-202ENST00000461612 EYA1Q99502 592 aa9.75□□□□□ -0.85
PRPF4B-202ENST00000461612 NUDT18Q6ZVK8 323 aa9.74□□□□□ -0.85
PRPF4B-202ENST00000461612 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.73□□□□□ -0.85
PRPF4B-202ENST00000461612 PDE4DQ08499 809 aa9.73□□□□□ -0.85
PRPF4B-202ENST00000461612 ADGRD1Q6QNK2 874 aa9.73□□□□□ -0.85
PRPF4B-202ENST00000461612 LAPTM4BQ86VI4 370 aa9.73□□□□□ -0.85
PRPF4B-202ENST00000461612 NBPF3Q9H094 633 aa9.73□□□□□ -0.85
PRPF4B-202ENST00000461612 BHMG1C9JSJ3 638 aaPredicted RBP9.72□□□□□ -0.85
PRPF4B-202ENST00000461612 FAM161AQ3B820 660 aa9.72□□□□□ -0.85
PRPF4B-202ENST00000461612 CDAN1Q8IWY9 1227 aa9.72□□□□□ -0.85
PRPF4B-202ENST00000461612 KRTAP3-3Q9BYR6 98 aa9.71□□□□□ -0.86
PRPF4B-202ENST00000461612 KRTAP3-2Q9BYR7 98 aa9.71□□□□□ -0.86
PRPF4B-202ENST00000461612 DNAJB2P25686 324 aa9.7□□□□□ -0.86
PRPF4B-202ENST00000461612 ANKRD13DQ6ZTN6 518 aa9.7□□□□□ -0.86
PRPF4B-202ENST00000461612 PCDH10Q9P2E7 1040 aa9.7□□□□□ -0.86
PRPF4B-202ENST00000461612 RCCD1A6NED2 376 aa9.69□□□□□ -0.86
PRPF4B-202ENST00000461612 HRO43593 1189 aa9.69□□□□□ -0.86
PRPF4B-202ENST00000461612 CLCN1P35523 988 aa9.69□□□□□ -0.86
PRPF4B-202ENST00000461612 FAM98CQ17RN3 349 aaKnown RBP9.69□□□□□ -0.86
PRPF4B-202ENST00000461612 C3orf80F5H4A9 247 aa9.68□□□□□ -0.86
PRPF4B-202ENST00000461612 BRPF1P55201 1214 aaPredicted RBP9.68□□□□□ -0.86
PRPF4B-202ENST00000461612 NEUROD2Q15784 382 aa9.68□□□□□ -0.86
PRPF4B-202ENST00000461612 STAC3Q96MF2 364 aa9.68□□□□□ -0.86
PRPF4B-202ENST00000461612 PHOX2BQ99453 314 aa9.68□□□□□ -0.86
PRPF4B-202ENST00000461612 SMAPO00193 183 aa9.67□□□□□ -0.86
PRPF4B-202ENST00000461612 MRPL50Q8N5N7 158 aaKnown RBP9.67□□□□□ -0.86
PRPF4B-202ENST00000461612 TMUB1Q9BVT8 246 aa9.67□□□□□ -0.86
PRPF4B-202ENST00000461612 GPCPD1Q9NPB8 672 aa9.67□□□□□ -0.86
PRPF4B-202ENST00000461612 DAXXQ9UER7 740 aaPredicted RBP9.67□□□□□ -0.86
PRPF4B-202ENST00000461612 HDGFP51858 240 aaKnown RBP9.66□□□□□ -0.86
PRPF4B-202ENST00000461612 TTLL12Q14166 644 aaPredicted RBP9.66□□□□□ -0.86
PRPF4B-202ENST00000461612 MDM2Q00987 491 aaPredicted RBP9.65□□□□□ -0.86
PRPF4B-202ENST00000461612 PARP9Q8IXQ6 854 aa9.65□□□□□ -0.86
PRPF4B-202ENST00000461612 TMEM134Q9H6X4 195 aa9.65□□□□□ -0.86
PRPF4B-202ENST00000461612 SEPT9Q9UHD8 586 aaPredicted RBP9.65□□□□□ -0.86
PRPF4B-202ENST00000461612 SLC4A3P48751 1232 aa9.62□□□□□ -0.87
PRPF4B-202ENST00000461612 GIGYF2Q6Y7W6 1299 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms