RNA–Protein interactions for RNA: ENST00000459235.1

snoU13.28-201, humanhuman

BASIC

Gene snoU13, Length 104 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
snoU13.28-201ENST00000459235 KCNA1Q09470 495 aa4.94□□□□□ -1.62
snoU13.28-201ENST00000459235 SOCS7O14512 581 aa4.93□□□□□ -1.62
snoU13.28-201ENST00000459235 BRD1O95696 1058 aa4.93□□□□□ -1.62
snoU13.28-201ENST00000459235 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.93□□□□□ -1.62
snoU13.28-201ENST00000459235 REPIN1Q9BWE0 567 aaKnown RBP4.93□□□□□ -1.62
snoU13.28-201ENST00000459235 AMOTL2Q9Y2J4 779 aa4.93□□□□□ -1.62
snoU13.28-201ENST00000459235 HMGB1P09429 215 aaKnown RBP4.92□□□□□ -1.62
snoU13.28-201ENST00000459235 TIE1P35590 1138 aa4.92□□□□□ -1.62
snoU13.28-201ENST00000459235 IRF5Q13568 498 aa4.92□□□□□ -1.62
snoU13.28-201ENST00000459235 MICALL2Q8IY33 904 aa4.92□□□□□ -1.62
snoU13.28-201ENST00000459235 PROCA1Q8NCQ7 364 aaPredicted RBP4.92□□□□□ -1.62
snoU13.28-201ENST00000459235 BEGAINQ9BUH8 593 aa4.92□□□□□ -1.62
snoU13.28-201ENST00000459235 RBM25P49756 843 aaKnown RBP4.91□□□□□ -1.62
snoU13.28-201ENST00000459235 CLK2P49760 499 aaKnown RBP4.91□□□□□ -1.62
snoU13.28-201ENST00000459235 FXR2P51116 673 aaKnown RBP eCLIP4.91□□□□□ -1.62
snoU13.28-201ENST00000459235 PPP2R2DQ66LE6 453 aa4.91□□□□□ -1.62
snoU13.28-201ENST00000459235 CALR3Q96L12 384 aaKnown RBP4.91□□□□□ -1.62
snoU13.28-201ENST00000459235 ZRANB1Q9UGI0 708 aa4.91□□□□□ -1.62
snoU13.28-201ENST00000459235 USTQ9Y2C2 406 aa4.91□□□□□ -1.62
snoU13.28-201ENST00000459235 KIF3CO14782 793 aa4.9□□□□□ -1.63
snoU13.28-201ENST00000459235 OATP04181 439 aa4.9□□□□□ -1.63
snoU13.28-201ENST00000459235 RFC5P40937 340 aa4.9□□□□□ -1.63
snoU13.28-201ENST00000459235 MDM2Q00987 491 aaPredicted RBP4.9□□□□□ -1.63
snoU13.28-201ENST00000459235 DDX12PQ92771 950 aa4.9□□□□□ -1.63
snoU13.28-201ENST00000459235 EPAS1Q99814 870 aa4.9□□□□□ -1.63
snoU13.28-201ENST00000459235 FAM217BQ9NTX9 383 aaPredicted RBP4.9□□□□□ -1.63
snoU13.28-201ENST00000459235 POLR3EQ9NVU0 708 aa4.9□□□□□ -1.63
snoU13.28-201ENST00000459235 LOC105371045A0A1W2PR82 267 aa4.89□□□□□ -1.63
snoU13.28-201ENST00000459235 C2orf72A6NCS6 295 aa4.89□□□□□ -1.63
snoU13.28-201ENST00000459235 G3V3G9 751 aa4.89□□□□□ -1.63
snoU13.28-201ENST00000459235 TUSC1Q2TAM9 212 aa4.89□□□□□ -1.63
snoU13.28-201ENST00000459235 MYSM1Q5VVJ2 828 aa4.89□□□□□ -1.63
snoU13.28-201ENST00000459235 CSB-PGBD3P0DP91 1061 aa4.88□□□□□ -1.63
snoU13.28-201ENST00000459235 PBXIP1Q96AQ6 731 aa4.88□□□□□ -1.63
snoU13.28-201ENST00000459235 SNRKQ9NRH2 765 aa4.88□□□□□ -1.63
snoU13.28-201ENST00000459235 EVI5O60447 810 aa4.87□□□□□ -1.63
snoU13.28-201ENST00000459235 FOXD4L5Q5VV16 416 aaPredicted RBP4.87□□□□□ -1.63
snoU13.28-201ENST00000459235 FOXD4L4Q8WXT5 416 aaPredicted RBP4.87□□□□□ -1.63
snoU13.28-201ENST00000459235 UPF1Q92900 1129 aaKnown RBP eCLIP4.87□□□□□ -1.63
snoU13.28-201ENST00000459235 TMEM121BQ9BXQ6 578 aaPredicted RBP4.87□□□□□ -1.63
snoU13.28-201ENST00000459235 PHF14O94880 888 aa4.86□□□□□ -1.63
snoU13.28-201ENST00000459235 CD44P16070 742 aaKnown RBP4.86□□□□□ -1.63
snoU13.28-201ENST00000459235 EN1Q05925 392 aaPredicted RBP4.86□□□□□ -1.63
snoU13.28-201ENST00000459235 CCDC27Q2M243 656 aa4.86□□□□□ -1.63
snoU13.28-201ENST00000459235 ANO8Q9HCE9 1232 aaPredicted RBP4.86□□□□□ -1.63
snoU13.28-201ENST00000459235 NPDC1Q9NQX5 325 aaPredicted RBP4.86□□□□□ -1.63
snoU13.28-201ENST00000459235 TTLL13PA6NNM8 815 aa4.85□□□□□ -1.63
snoU13.28-201ENST00000459235 WASHC4Q2M389 1173 aa4.85□□□□□ -1.63
snoU13.28-201ENST00000459235 DPY19L2Q6NUT2 758 aa4.85□□□□□ -1.63
snoU13.28-201ENST00000459235 CERKQ8TCT0 537 aa4.85□□□□□ -1.63
snoU13.28-201ENST00000459235 GLMNQ92990 594 aa4.85□□□□□ -1.63
snoU13.28-201ENST00000459235 PHF12Q96QT6 1004 aa4.85□□□□□ -1.63
snoU13.28-201ENST00000459235 TBC1D2Q9BYX2 928 aa4.85□□□□□ -1.63
snoU13.28-201ENST00000459235 GDPD2Q9HCC8 539 aa4.85□□□□□ -1.63
snoU13.28-201ENST00000459235 BOLA1Q9Y3E2 137 aa4.85□□□□□ -1.63
snoU13.28-201ENST00000459235 IGSF3O75054 1194 aa4.84□□□□□ -1.63
snoU13.28-201ENST00000459235 GJA5P36382 358 aa4.84□□□□□ -1.63
snoU13.28-201ENST00000459235 ABL2P42684 1182 aa4.84□□□□□ -1.63
snoU13.28-201ENST00000459235 PRIM1P49642 420 aaKnown RBP4.84□□□□□ -1.63
snoU13.28-201ENST00000459235 METTL3Q86U44 580 aaKnown RBP4.84□□□□□ -1.63
snoU13.28-201ENST00000459235 POTEDQ86YR6 584 aa4.84□□□□□ -1.63
snoU13.28-201ENST00000459235 MS4A3Q96HJ5 214 aa4.84□□□□□ -1.63
snoU13.28-201ENST00000459235 RIC3Q7Z5B4 369 aa4.83□□□□□ -1.64
snoU13.28-201ENST00000459235 MTMR14Q8NCE2 650 aa4.83□□□□□ -1.64
snoU13.28-201ENST00000459235 PTCD2Q8WV60 388 aaKnown RBP4.83□□□□□ -1.64
snoU13.28-201ENST00000459235 L3MBTL3Q96JM7 780 aaPredicted RBP4.83□□□□□ -1.64
snoU13.28-201ENST00000459235 PHOX2BQ99453 314 aa4.83□□□□□ -1.64
snoU13.28-201ENST00000459235 SPTLC1O15269 473 aa4.82□□□□□ -1.64
snoU13.28-201ENST00000459235 MAP3K7O43318 606 aa4.82□□□□□ -1.64
snoU13.28-201ENST00000459235 B4GALNT3Q6L9W6 998 aa4.82□□□□□ -1.64
snoU13.28-201ENST00000459235 SND1Q7KZF4 910 aaKnown RBP eCLIP4.82□□□□□ -1.64
snoU13.28-201ENST00000459235 PXYLP1Q8TE99 480 aa4.82□□□□□ -1.64
snoU13.28-201ENST00000459235 OCEL1Q9H607 264 aa4.82□□□□□ -1.64
snoU13.28-201ENST00000459235 TRIM35Q9UPQ4 493 aa4.82□□□□□ -1.64
snoU13.28-201ENST00000459235 TRPC6Q9Y210 931 aa4.82□□□□□ -1.64
snoU13.28-201ENST00000459235 HDGFL1Q5TGJ6 251 aa4.81□□□□□ -1.64
snoU13.28-201ENST00000459235 TYW1BQ6NUM6 668 aa4.81□□□□□ -1.64
snoU13.28-201ENST00000459235 PDCD7Q8N8D1 485 aaKnown RBP4.81□□□□□ -1.64
snoU13.28-201ENST00000459235 SLAIN1Q8ND83 568 aa4.81□□□□□ -1.64
snoU13.28-201ENST00000459235 ZNF428Q96B54 188 aa4.81□□□□□ -1.64
snoU13.28-201ENST00000459235 VRTNQ9H8Y1 702 aa4.81□□□□□ -1.64
snoU13.28-201ENST00000459235 RBM27Q9P2N5 1060 aaKnown RBP4.81□□□□□ -1.64
snoU13.28-201ENST00000459235 MYT1LQ9UL68 1186 aa4.81□□□□□ -1.64
snoU13.28-201ENST00000459235 SLC34A2O95436 690 aa4.8□□□□□ -1.64
snoU13.28-201ENST00000459235 HSP90B1P14625 803 aaKnown RBP4.8□□□□□ -1.64
snoU13.28-201ENST00000459235 ERCC3P19447 782 aa4.8□□□□□ -1.64
snoU13.28-201ENST00000459235 CLCN6P51797 869 aa4.8□□□□□ -1.64
snoU13.28-201ENST00000459235 SRPK2P78362 688 aaKnown RBP4.8□□□□□ -1.64
snoU13.28-201ENST00000459235 IER5LQ5T953 404 aa4.8□□□□□ -1.64
snoU13.28-201ENST00000459235 RSPH4AQ5TD94 716 aa4.8□□□□□ -1.64
snoU13.28-201ENST00000459235 ZNF710Q8N1W2 664 aa4.8□□□□□ -1.64
snoU13.28-201ENST00000459235 CDHR5Q9HBB8 845 aa4.8□□□□□ -1.64
snoU13.28-201ENST00000459235 LIMD1Q9UGP4 676 aa4.8□□□□□ -1.64
snoU13.28-201ENST00000459235 NDUFB9Q9Y6M9 179 aa4.8□□□□□ -1.64
snoU13.28-201ENST00000459235 POM121CA8CG34 1229 aa4.79□□□□□ -1.64
snoU13.28-201ENST00000459235 SOX11P35716 441 aa4.79□□□□□ -1.64
snoU13.28-201ENST00000459235 NUTM1Q86Y26 1132 aa4.79□□□□□ -1.64
snoU13.28-201ENST00000459235 SULF1Q8IWU6 871 aa4.79□□□□□ -1.64
snoU13.28-201ENST00000459235 RBM46Q8TBY0 533 aaKnown RBP4.79□□□□□ -1.64
snoU13.28-201ENST00000459235 SPIRE2Q8WWL2 714 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms