RNA–Protein interactions for RNA: ENST00000457858.1

LINC01038-201, Transcript of long intergenic non-protein coding RNA 1038, humanhuman

TSL 3 BASIC

Gene LINC01038, Length 428 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01038-201ENST00000457858 LSM11P83369 360 aaKnown RBP eCLIP7.76□□□□□ -1.17
LINC01038-201ENST00000457858 RBM33Q96EV2 1170 aaKnown RBP7.76□□□□□ -1.17
LINC01038-201ENST00000457858 ANKRD13DQ6ZTN6 518 aa7.75□□□□□ -1.17
LINC01038-201ENST00000457858 MAP3K7O43318 606 aa7.73□□□□□ -1.17
LINC01038-201ENST00000457858 EN1Q05925 392 aaPredicted RBP7.73□□□□□ -1.17
LINC01038-201ENST00000457858 DMRTA1Q5VZB9 504 aa7.73□□□□□ -1.17
LINC01038-201ENST00000457858 SEMA3EO15041 775 aa7.72□□□□□ -1.17
LINC01038-201ENST00000457858 MLLT3P42568 568 aaPredicted RBP7.72□□□□□ -1.17
LINC01038-201ENST00000457858 PPP1R3GB7ZBB8 358 aa7.7□□□□□ -1.18
LINC01038-201ENST00000457858 C6orf132Q5T0Z8 1188 aa7.7□□□□□ -1.18
LINC01038-201ENST00000457858 ADGRD1Q6QNK2 874 aa7.7□□□□□ -1.18
LINC01038-201ENST00000457858 OSBPP22059 807 aa7.69□□□□□ -1.18
LINC01038-201ENST00000457858 TSR1Q2NL82 804 aaKnown RBP7.69□□□□□ -1.18
LINC01038-201ENST00000457858 TK2O00142 265 aa7.68□□□□□ -1.18
LINC01038-201ENST00000457858 COL9A1P20849 921 aa7.68□□□□□ -1.18
LINC01038-201ENST00000457858 PRIM1P49642 420 aaKnown RBP7.68□□□□□ -1.18
LINC01038-201ENST00000457858 ZBED2Q9BTP6 218 aa7.67□□□□□ -1.18
LINC01038-201ENST00000457858 TESPA1A2RU30 521 aaPredicted RBP7.66□□□□□ -1.18
LINC01038-201ENST00000457858 CDHR5Q9HBB8 845 aa7.66□□□□□ -1.18
LINC01038-201ENST00000457858 VPS9D1Q9Y2B5 631 aa7.66□□□□□ -1.18
LINC01038-201ENST00000457858 PROX2Q3B8N5 592 aa7.65□□□□□ -1.18
LINC01038-201ENST00000457858 SMYD5Q6GMV2 418 aa7.65□□□□□ -1.18
LINC01038-201ENST00000457858 STAC3Q96MF2 364 aa7.65□□□□□ -1.18
LINC01038-201ENST00000457858 SLC4A5Q9BY07 1137 aa7.65□□□□□ -1.18
LINC01038-201ENST00000457858 MYT1LQ9UL68 1186 aa7.64□□□□□ -1.19
LINC01038-201ENST00000457858 CERKQ8TCT0 537 aa7.63□□□□□ -1.19
LINC01038-201ENST00000457858 NUTM2FA1L443 756 aa7.62□□□□□ -1.19
LINC01038-201ENST00000457858 TULP1O00294 542 aaPredicted RBP7.62□□□□□ -1.19
LINC01038-201ENST00000457858 HRO43593 1189 aa7.61□□□□□ -1.19
LINC01038-201ENST00000457858 RNF166Q96A37 237 aaPredicted RBP7.61□□□□□ -1.19
LINC01038-201ENST00000457858 NBPF3Q9H094 633 aa7.61□□□□□ -1.19
LINC01038-201ENST00000457858 TRIM6-TRIM34B2RNG4 842 aa7.6□□□□□ -1.19
LINC01038-201ENST00000457858 RABGEF1Q9UJ41 708 aa7.6□□□□□ -1.19
LINC01038-201ENST00000457858 PRSS12P56730 875 aa7.59□□□□□ -1.19
LINC01038-201ENST00000457858 RBM26Q5T8P6 1007 aaKnown RBP7.59□□□□□ -1.19
LINC01038-201ENST00000457858 MRPL50Q8N5N7 158 aaKnown RBP7.59□□□□□ -1.19
LINC01038-201ENST00000457858 CDCA7LQ96GN5 454 aa7.59□□□□□ -1.19
LINC01038-201ENST00000457858 GOLGA8CPA6NN73 597 aa7.58□□□□□ -1.2
LINC01038-201ENST00000457858 KIAA1468Q9P260 1216 aa7.58□□□□□ -1.2
LINC01038-201ENST00000457858 ONECUT3O60422 494 aaPredicted RBP7.57□□□□□ -1.2
LINC01038-201ENST00000457858 PTGDRQ13258 359 aa7.57□□□□□ -1.2
LINC01038-201ENST00000457858 PACS2Q86VP3 889 aa7.57□□□□□ -1.2
LINC01038-201ENST00000457858 NPDC1Q9NQX5 325 aaPredicted RBP7.57□□□□□ -1.2
LINC01038-201ENST00000457858 TSKSQ9UJT2 592 aa7.57□□□□□ -1.2
LINC01038-201ENST00000457858 BHMG1C9JSJ3 638 aaPredicted RBP7.56□□□□□ -1.2
LINC01038-201ENST00000457858 FCHSD2O94868 740 aa7.56□□□□□ -1.2
LINC01038-201ENST00000457858 PADI6Q6TGC4 694 aa7.56□□□□□ -1.2
LINC01038-201ENST00000457858 RBM27Q9P2N5 1060 aaKnown RBP7.56□□□□□ -1.2
LINC01038-201ENST00000457858 SEPT9Q9UHD8 586 aaPredicted RBP7.56□□□□□ -1.2
LINC01038-201ENST00000457858 NBPF26B4DH59 902 aa7.55□□□□□ -1.2
LINC01038-201ENST00000457858 GPIHBP1Q8IV16 184 aa7.55□□□□□ -1.2
LINC01038-201ENST00000457858 KCTD12Q96CX2 325 aaKnown RBP7.55□□□□□ -1.2
LINC01038-201ENST00000457858 FAM198AQ9UFP1 575 aa7.54□□□□□ -1.2
LINC01038-201ENST00000457858 SMAPO00193 183 aa7.53□□□□□ -1.2
LINC01038-201ENST00000457858 LAPTM4BQ86VI4 370 aa7.53□□□□□ -1.2
LINC01038-201ENST00000457858 PNMA3Q9UL41 463 aa7.53□□□□□ -1.2
LINC01038-201ENST00000457858 HIC1Q14526 733 aa7.52□□□□□ -1.21
LINC01038-201ENST00000457858 FAM98CQ17RN3 349 aaKnown RBP7.52□□□□□ -1.21
LINC01038-201ENST00000457858 WNT2BQ93097 391 aa7.52□□□□□ -1.21
LINC01038-201ENST00000457858 ANKK1Q8NFD2 765 aa7.51□□□□□ -1.21
LINC01038-201ENST00000457858 TATDN2Q93075 761 aa7.51□□□□□ -1.21
LINC01038-201ENST00000457858 GPR37O15354 613 aa7.5□□□□□ -1.21
LINC01038-201ENST00000457858 LMOD2Q6P5Q4 547 aa7.5□□□□□ -1.21
LINC01038-201ENST00000457858 NUDT18Q6ZVK8 323 aa7.5□□□□□ -1.21
LINC01038-201ENST00000457858 TTC13Q8NBP0 860 aa7.5□□□□□ -1.21
LINC01038-201ENST00000457858 ZFRQ96KR1 1074 aaKnown RBP7.5□□□□□ -1.21
LINC01038-201ENST00000457858 C3orf80F5H4A9 247 aa7.49□□□□□ -1.21
LINC01038-201ENST00000457858 GNPATO15228 680 aa7.49□□□□□ -1.21
LINC01038-201ENST00000457858 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.49□□□□□ -1.21
LINC01038-201ENST00000457858 PTPN5P54829 565 aa7.48□□□□□ -1.21
LINC01038-201ENST00000457858 THSD4Q6ZMP0 1018 aa7.48□□□□□ -1.21
LINC01038-201ENST00000457858 BCAMP50895 628 aa7.47□□□□□ -1.21
LINC01038-201ENST00000457858 FAM161AQ3B820 660 aa7.47□□□□□ -1.21
LINC01038-201ENST00000457858 LRCH3Q96II8 777 aa7.47□□□□□ -1.21
LINC01038-201ENST00000457858 HCSTQ9UBK5 93 aa7.47□□□□□ -1.21
LINC01038-201ENST00000457858 RBM46Q8TBY0 533 aaKnown RBP7.46□□□□□ -1.22
LINC01038-201ENST00000457858 BCANQ96GW7 911 aa7.46□□□□□ -1.22
LINC01038-201ENST00000457858 ADGRG1Q9Y653 693 aa7.46□□□□□ -1.22
LINC01038-201ENST00000457858 RNF40O75150 1001 aa7.45□□□□□ -1.22
LINC01038-201ENST00000457858 FECHP22830 423 aa7.45□□□□□ -1.22
LINC01038-201ENST00000457858 SAMD7Q7Z3H4 446 aa7.45□□□□□ -1.22
LINC01038-201ENST00000457858 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.45□□□□□ -1.22
LINC01038-201ENST00000457858 SOWAHBA6NEL2 793 aa7.44□□□□□ -1.22
LINC01038-201ENST00000457858 HDGFP51858 240 aaKnown RBP7.44□□□□□ -1.22
LINC01038-201ENST00000457858 EYA1Q99502 592 aa7.43□□□□□ -1.22
LINC01038-201ENST00000457858 OATP04181 439 aa7.42□□□□□ -1.22
LINC01038-201ENST00000457858 DNAJB2P25686 324 aa7.42□□□□□ -1.22
LINC01038-201ENST00000457858 SWT1Q5T5J6 900 aaKnown RBP7.42□□□□□ -1.22
LINC01038-201ENST00000457858 HPS5Q9UPZ3 1129 aa7.42□□□□□ -1.22
LINC01038-201ENST00000457858 SLC4A3P48751 1232 aa7.41□□□□□ -1.22
LINC01038-201ENST00000457858 MAP2K5Q13163 448 aa7.41□□□□□ -1.22
LINC01038-201ENST00000457858 RCCD1A6NED2 376 aa7.4□□□□□ -1.22
LINC01038-201ENST00000457858 METTL3Q86U44 580 aaKnown RBP7.4□□□□□ -1.22
LINC01038-201ENST00000457858 PXYLP1Q8TE99 480 aa7.4□□□□□ -1.22
LINC01038-201ENST00000457858 TSR3Q9UJK0 312 aaKnown RBP7.4□□□□□ -1.22
LINC01038-201ENST00000457858 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.39□□□□□ -1.23
LINC01038-201ENST00000457858 PPP4CP60510 307 aa7.39□□□□□ -1.23
LINC01038-201ENST00000457858 SLF2Q8IX21 1173 aa7.39□□□□□ -1.23
LINC01038-201ENST00000457858 TMEM134Q9H6X4 195 aa7.39□□□□□ -1.23
LINC01038-201ENST00000457858 WBP1LQ9NX94 342 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms