RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 MRS2Q9HD23 443 aa18.37■□□□□ 0.53
TOP3B-213ENST00000457179 RPRD2Q5VT52 1461 aaKnown RBP18.37■□□□□ 0.53
TOP3B-213ENST00000457179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.37■□□□□ 0.535e-7■□□□□ 8.9
TOP3B-213ENST00000457179 PLEKHH2Q8IVE3 1493 aa18.37■□□□□ 0.53
TOP3B-213ENST00000457179 CHGAP10645 457 aaKnown RBP18.36■□□□□ 0.53
TOP3B-213ENST00000457179 TRAPPC8Q9Y2L5 1435 aa18.35■□□□□ 0.53
TOP3B-213ENST00000457179 ST20-MTHFSA0A0A6YYL1 179 aa18.35■□□□□ 0.53
TOP3B-213ENST00000457179 GGT6Q6P531 493 aa18.35■□□□□ 0.53
TOP3B-213ENST00000457179 NBPF1Q3BBV0 1214 aa18.34■□□□□ 0.53
TOP3B-213ENST00000457179 CCDC7Q96M83 1385 aa18.34■□□□□ 0.53
TOP3B-213ENST00000457179 KIF7Q2M1P5 1343 aa18.33■□□□□ 0.52
TOP3B-213ENST00000457179 SAMD9LQ8IVG5 1584 aa18.33■□□□□ 0.52
TOP3B-213ENST00000457179 SCAPERQ9BY12 1400 aa18.32■□□□□ 0.52
TOP3B-213ENST00000457179 PRKRIP1Q9H875 184 aaPredicted RBP18.32■□□□□ 0.52
TOP3B-213ENST00000457179 ARHGEF12Q9NZN5 1544 aa18.31■□□□□ 0.52
TOP3B-213ENST00000457179 RAPGEF3O95398 923 aa18.3■□□□□ 0.52
TOP3B-213ENST00000457179 ANP32AP39687 249 aaKnown RBP18.3■□□□□ 0.52
TOP3B-213ENST00000457179 USP47Q96K76 1375 aa18.3■□□□□ 0.52
TOP3B-213ENST00000457179 CNTLNQ9NXG0 1405 aa18.29■□□□□ 0.52
TOP3B-213ENST00000457179 CCDC144AA2RUR9 1427 aa18.29■□□□□ 0.52
TOP3B-213ENST00000457179 PLCH2O75038 1416 aa18.29■□□□□ 0.52
TOP3B-213ENST00000457179 ZBTB47Q9UFB7 747 aaPredicted RBP18.28■□□□□ 0.52
TOP3B-213ENST00000457179 ADGRL2O95490 1459 aa18.28■□□□□ 0.52
TOP3B-213ENST00000457179 ADCY10Q96PN6 1610 aa18.27■□□□□ 0.52
TOP3B-213ENST00000457179 CDC42BPBQ9Y5S2 1711 aa18.27■□□□□ 0.51
TOP3B-213ENST00000457179 ROCK2O75116 1388 aaKnown RBP18.26■□□□□ 0.51
TOP3B-213ENST00000457179 TEX14Q8IWB6 1497 aa18.26■□□□□ 0.51
TOP3B-213ENST00000457179 ASXL2Q76L83 1435 aa18.25■□□□□ 0.51
TOP3B-213ENST00000457179 EIF5BO60841 1220 aaKnown RBP18.25■□□□□ 0.51
TOP3B-213ENST00000457179 CLASP1Q7Z460 1538 aa18.25■□□□□ 0.51
TOP3B-213ENST00000457179 SHROOM2Q13796 1616 aa18.25■□□□□ 0.51
TOP3B-213ENST00000457179 NUTM2DQ5VT03 806 aaPredicted RBP18.24■□□□□ 0.51
TOP3B-213ENST00000457179 IPO9Q96P70 1041 aaKnown RBP18.24■□□□□ 0.51
TOP3B-213ENST00000457179 ZCCHC11Q5TAX3 1644 aaKnown RBP18.23■□□□□ 0.51
TOP3B-213ENST00000457179 UBE2Q2Q8WVN8 375 aa18.23■□□□□ 0.51
TOP3B-213ENST00000457179 FANCAO15360 1455 aa18.22■□□□□ 0.51
TOP3B-213ENST00000457179 NPM2Q86SE8 214 aaKnown RBP18.21■□□□□ 0.51
TOP3B-213ENST00000457179 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
TOP3B-213ENST00000457179 WDR7Q9Y4E6 1490 aa18.2■□□□□ 0.5
TOP3B-213ENST00000457179 FAM135AQ9P2D6 1515 aa18.2■□□□□ 0.5
TOP3B-213ENST00000457179 SHANK2Q9UPX8 1470 aa18.19■□□□□ 0.5
TOP3B-213ENST00000457179 PREX2Q70Z35 1606 aa18.19■□□□□ 0.5
TOP3B-213ENST00000457179 ADGBQ8N7X0 1667 aa18.18■□□□□ 0.5
TOP3B-213ENST00000457179 ADGRL1O94910 1474 aa18.16■□□□□ 0.5
TOP3B-213ENST00000457179 NEFMP07197 916 aa18.15■□□□□ 0.5
TOP3B-213ENST00000457179 SPATA31E1Q6ZUB1 1445 aa18.15■□□□□ 0.5
TOP3B-213ENST00000457179 CROCC2H7BZ55 1655 aa18.14■□□□□ 0.49
TOP3B-213ENST00000457179 CC2D1BQ5T0F9 858 aaKnown RBP18.14■□□□□ 0.49
TOP3B-213ENST00000457179 MLECQ14165 292 aa18.13■□□□□ 0.49
TOP3B-213ENST00000457179 MYO5CQ9NQX4 1742 aa18.13■□□□□ 0.49
TOP3B-213ENST00000457179 FAM69CQ0P6D2 419 aa18.13■□□□□ 0.49
TOP3B-213ENST00000457179 CD109Q6YHK3 1445 aa18.13■□□□□ 0.49
TOP3B-213ENST00000457179 ARHGEF5Q12774 1597 aa18.12■□□□□ 0.49
TOP3B-213ENST00000457179 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
TOP3B-213ENST00000457179 TMC1Q8TDI8 760 aa18.11■□□□□ 0.49
TOP3B-213ENST00000457179 UHRF1BP1LA0JNW5 1464 aa18.11■□□□□ 0.49
TOP3B-213ENST00000457179 WASHC2CQ9Y4E1 1318 aa18.1■□□□□ 0.49
TOP3B-213ENST00000457179 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
TOP3B-213ENST00000457179 BRPF3Q9ULD4 1205 aa18.09■□□□□ 0.49
TOP3B-213ENST00000457179 KANK1Q14678 1352 aa18.09■□□□□ 0.49
TOP3B-213ENST00000457179 CFAP70Q5T0N1 1121 aa18.06■□□□□ 0.48
TOP3B-213ENST00000457179 ZBED9Q6R2W3 1325 aa18.05■□□□□ 0.48
TOP3B-213ENST00000457179 SAFB2Q14151 953 aaKnown RBP eCLIP18.04■□□□□ 0.48
TOP3B-213ENST00000457179 DHX29Q7Z478 1369 aaKnown RBP18.04■□□□□ 0.48
TOP3B-213ENST00000457179 ABCC1P33527 1531 aa18.04■□□□□ 0.48
TOP3B-213ENST00000457179 DUOX2Q9NRD8 1548 aa18.04■□□□□ 0.48
TOP3B-213ENST00000457179 BCORL1Q5H9F3 1711 aa18.02■□□□□ 0.47
TOP3B-213ENST00000457179 TMEM132EQ6IEE7 984 aa18.02■□□□□ 0.47
TOP3B-213ENST00000457179 PANK3Q9H999 370 aa18.02■□□□□ 0.47
TOP3B-213ENST00000457179 CFAP65Q6ZU64 1925 aaKnown RBP18.01■□□□□ 0.47
TOP3B-213ENST00000457179 A2MP01023 1474 aa18■□□□□ 0.47
TOP3B-213ENST00000457179 ERBINQ96RT1 1412 aa18■□□□□ 0.47
TOP3B-213ENST00000457179 TRAK1Q9UPV9 953 aa18■□□□□ 0.47
TOP3B-213ENST00000457179 ADGRF5Q8IZF2 1346 aa17.99■□□□□ 0.47
TOP3B-213ENST00000457179 PRAG1Q86YV5 1406 aa17.99■□□□□ 0.47
TOP3B-213ENST00000457179 TMF1P82094 1093 aa17.98■□□□□ 0.47
TOP3B-213ENST00000457179 DISP3Q9P2K9 1392 aa17.96■□□□□ 0.47
TOP3B-213ENST00000457179 DNAJC5Q9H3Z4 198 aa17.96■□□□□ 0.47
TOP3B-213ENST00000457179 UGGT1Q9NYU2 1555 aa17.96■□□□□ 0.47
TOP3B-213ENST00000457179 ATP7AQ04656 1500 aa17.96■□□□□ 0.47
TOP3B-213ENST00000457179 STK26Q9P289 416 aa17.95■□□□□ 0.46
TOP3B-213ENST00000457179 STAG3Q9UJ98 1225 aa17.95■□□□□ 0.46
TOP3B-213ENST00000457179 RALGAPBQ86X10 1494 aa17.95■□□□□ 0.46
TOP3B-213ENST00000457179 PNISRQ8TF01 805 aaKnown RBP17.94■□□□□ 0.46
TOP3B-213ENST00000457179 TNNT2P45379 298 aaPredicted RBP17.94■□□□□ 0.46
TOP3B-213ENST00000457179 TESK2Q96S53 571 aa17.94■□□□□ 0.46
TOP3B-213ENST00000457179 ZFYVE16Q7Z3T8 1539 aa17.94■□□□□ 0.46
TOP3B-213ENST00000457179 KDM5CP41229 1560 aa17.93■□□□□ 0.46
TOP3B-213ENST00000457179 UHRF1BP1Q6BDS2 1440 aa17.92■□□□□ 0.46
TOP3B-213ENST00000457179 KDM5DQ9BY66 1539 aa17.92■□□□□ 0.46
TOP3B-213ENST00000457179 FBXO31Q5XUX0 539 aaPredicted RBP17.92■□□□□ 0.46
TOP3B-213ENST00000457179 USP35Q9P2H5 1018 aa17.91■□□□□ 0.46
TOP3B-213ENST00000457179 NUDCQ9Y266 331 aa17.91■□□□□ 0.46
TOP3B-213ENST00000457179 RTEL1-TNFRSF6BF6WH68 1400 aa17.91■□□□□ 0.46
TOP3B-213ENST00000457179 KNSTRNQ9Y448 316 aa17.9■□□□□ 0.46
TOP3B-213ENST00000457179 ZNF518AQ6AHZ1 1483 aa17.89■□□□□ 0.45
TOP3B-213ENST00000457179 ATP10AO60312 1499 aa17.89■□□□□ 0.45
TOP3B-213ENST00000457179 ARID4BQ4LE39 1312 aaPredicted RBP17.89■□□□□ 0.45
TOP3B-213ENST00000457179 MAST1Q9Y2H9 1570 aa17.88■□□□□ 0.45
TOP3B-213ENST00000457179 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms