RNA–Protein interactions for RNA: ENST00000456049.1

VSTM2A-OT1-201, VSTM2A overlapping transcript 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM2A-OT1, Length 3,031 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-OT1-201ENST00000456049 PTPN23Q9H3S7 1636 aa4.52□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 CNKSR2Q8WXI2 1034 aa4.52□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 INO80Q9ULG1 1556 aaPredicted RBP4.52□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.52□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 KIAA1107Q9UPP5 1409 aa4.52□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 C9orf84Q5VXU9 1444 aa4.51□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 MAP3K1Q13233 1512 aa4.51□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 DAPK1P53355 1430 aa4.51□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 YTHDC1Q96MU7 727 aaKnown RBP4.51□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 ADGBQ8N7X0 1667 aa4.51□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 A2MP01023 1474 aa4.51□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 CCDC141Q6ZP82 1450 aa4.51□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 DIEXFQ68CQ4 756 aaKnown RBP4.51□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 PLXNC1O60486 1568 aa4.5□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 CFAP74Q9C0B2 1584 aa4.5□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 LMTK3Q96Q04 1460 aa4.5□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 MAPK8IP2Q13387 824 aaPredicted RBP4.5□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 KIF15Q9NS87 1388 aa4.49□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 MROH1Q8NDA8 1641 aa4.49□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 FER1L4A9Z1Z3 1794 aa4.49□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 NCOA1Q15788 1441 aa4.49□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 ZMYM3Q14202 1370 aa4.49□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 TSPY4P0CV99 314 aa4.49□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 TSPY10P0CW01 314 aa4.49□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 TCOF1Q13428 1488 aaKnown RBP4.49□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 MAGI2Q86UL8 1455 aa4.49□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 DHX29Q7Z478 1369 aaKnown RBP4.49□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 CLTCQ00610 1675 aaKnown RBP4.49□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 MIA2Q96PC5 1412 aa4.48□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 C3P01024 1663 aa4.48□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 NUTM2DQ5VT03 806 aaPredicted RBP4.48□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 DNMT1P26358 1616 aaKnown RBP4.48□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 NEUROD1Q13562 356 aa4.48□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 ARHGEF5Q12774 1597 aa4.47□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 UGGT1Q9NYU2 1555 aa4.47□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 NPM3O75607 178 aaKnown RBP4.47□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 WASHC2CQ9Y4E1 1318 aa4.47□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 CROCC2H7BZ55 1655 aa4.47□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 ZNF316A6NFI3 1004 aaPredicted RBP4.46□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 RBM33Q96EV2 1170 aaKnown RBP4.46□□□□□ -1.69
VSTM2A-OT1-201ENST00000456049 NCKAP5LQ9HCH0 1330 aa4.46□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 RTEL1-TNFRSF6BF6WH68 1400 aa4.46□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 RRBP1Q9P2E9 1410 aaKnown RBP4.46□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 CEP152O94986 1710 aa4.46□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 AGLP35573 1532 aa4.46□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 NPATQ14207 1427 aa4.46□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 ABCC3O15438 1527 aa4.45□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 ANKRD50Q9ULJ7 1429 aa4.45□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 REREQ9P2R6 1566 aa4.45□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.45□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 HAX1O00165 279 aa4.45□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 NAIPQ13075 1403 aa4.45□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 STRCQ7RTU9 1775 aa4.44□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 PRDM15P57071 1507 aaPredicted RBP4.44□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 LTKP29376 864 aa4.44□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 SIN3AQ96ST3 1273 aa4.44□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 HIRIP3Q9BW71 556 aaPredicted RBP4.44□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 MAST1Q9Y2H9 1570 aa4.44□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 IDI1Q13907 227 aa4.44□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 MIER1Q8N108 512 aa4.43□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 ANKRD30AQ9BXX3 1397 aa4.43□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 SHANK2Q9UPX8 1470 aa4.43□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 RSPH4AQ5TD94 716 aa4.43□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 KRTAP4-6Q9BYQ5 205 aa4.43□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 ESF1Q9H501 851 aaKnown RBP4.43□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 ZNF335Q9H4Z2 1342 aaPredicted RBP4.43□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 NUP155O75694 1391 aa4.43□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 ADGRL2O95490 1459 aa4.43□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 DUOX2Q9NRD8 1548 aa4.43□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 UTRNP46939 3433 aa4.42□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 RNF17Q9BXT8 1623 aaKnown RBP4.42□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 PLA2R1Q13018 1463 aa4.42□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 KDM5DQ9BY66 1539 aa4.42□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 SYNMO15061 1565 aa4.42□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 CAMSAP1Q5T5Y3 1602 aa4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 MYO3AQ8NEV4 1616 aa4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 ERBINQ96RT1 1412 aa4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 PZPP20742 1482 aa4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 ERVK-7P63135 1459 aa4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 VWDEQ8N2E2 1590 aa4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 DEPDC5O75140 1603 aa4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 SETD1BQ9UPS6 1966 aaKnown RBP4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 EP400Q96L91 3159 aa4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 ILDR1Q86SU0 546 aaPredicted RBP4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 TRIM52Q96A61 297 aa4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 DHX57Q6P158 1386 aaKnown RBP4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 TNRQ92752 1358 aa4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 MYO5BQ9ULV0 1848 aa4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 E9PCH4 1651 aa4.41□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 CEP170BQ9Y4F5 1589 aaPredicted RBP4.4□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 UHRF1BP1Q6BDS2 1440 aa4.4□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 SLC26A8Q96RN1 970 aa4.4□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 RAB3GAP2Q9H2M9 1393 aa4.4□□□□□ -1.7
VSTM2A-OT1-201ENST00000456049 PKD2Q13563 968 aa4.4□□□□□ -1.71
VSTM2A-OT1-201ENST00000456049 GOLGB1Q14789 3259 aaKnown RBP4.4□□□□□ -1.71
VSTM2A-OT1-201ENST00000456049 PREX1Q8TCU6 1659 aa4.4□□□□□ -1.71
VSTM2A-OT1-201ENST00000456049 FAM135AQ9P2D6 1515 aa4.4□□□□□ -1.71
VSTM2A-OT1-201ENST00000456049 HFM1A2PYH4 1435 aa4.4□□□□□ -1.71
VSTM2A-OT1-201ENST00000456049 CHGAP10645 457 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms