RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 ITGBL1O95965 494 aaPredicted RBP10.42□□□□□ -0.74
R3HDM1-212ENST00000456040 KCNC4Q03721 635 aa10.41□□□□□ -0.74
R3HDM1-212ENST00000456040 TYW1BQ6NUM6 668 aa10.41□□□□□ -0.74
R3HDM1-212ENST00000456040 SOWAHBA6NEL2 793 aa10.39□□□□□ -0.75
R3HDM1-212ENST00000456040 PHF14O94880 888 aa10.38□□□□□ -0.75
R3HDM1-212ENST00000456040 BCAMP50895 628 aa10.38□□□□□ -0.75
R3HDM1-212ENST00000456040 LAPTM4AQ15012 233 aa10.38□□□□□ -0.75
R3HDM1-212ENST00000456040 PROX2Q3B8N5 592 aa10.38□□□□□ -0.75
R3HDM1-212ENST00000456040 ONECUT3O60422 494 aaPredicted RBP10.37□□□□□ -0.75
R3HDM1-212ENST00000456040 KIAA1468Q9P260 1216 aa10.37□□□□□ -0.75
R3HDM1-212ENST00000456040 PCDHGA10Q9Y5H3 936 aa10.37□□□□□ -0.75
R3HDM1-212ENST00000456040 ZFRQ96KR1 1074 aaKnown RBP10.36□□□□□ -0.75
R3HDM1-212ENST00000456040 COL9A1P20849 921 aa10.34□□□□□ -0.75
R3HDM1-212ENST00000456040 EPAS1Q99814 870 aa10.34□□□□□ -0.75
R3HDM1-212ENST00000456040 MFSD10Q14728 455 aa10.33□□□□□ -0.76
R3HDM1-212ENST00000456040 WBP1LQ9NX94 342 aa10.32□□□□□ -0.76
R3HDM1-212ENST00000456040 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.32□□□□□ -0.76
R3HDM1-212ENST00000456040 LRCH3Q96II8 777 aa10.31□□□□□ -0.76
R3HDM1-212ENST00000456040 TSR3Q9UJK0 312 aaKnown RBP10.31□□□□□ -0.76
R3HDM1-212ENST00000456040 FAM98CQ17RN3 349 aaKnown RBP10.3□□□□□ -0.76
R3HDM1-212ENST00000456040 GTPBP6O43824 516 aaPredicted RBP10.29□□□□□ -0.76
R3HDM1-212ENST00000456040 C6orf132Q5T0Z8 1188 aa10.29□□□□□ -0.76
R3HDM1-212ENST00000456040 EMILIN3Q9NT22 766 aa10.29□□□□□ -0.76
R3HDM1-212ENST00000456040 SEPT9Q9UHD8 586 aaPredicted RBP10.29□□□□□ -0.76
R3HDM1-212ENST00000456040 TRIM6-TRIM34B2RNG4 842 aa10.27□□□□□ -0.77
R3HDM1-212ENST00000456040 HPS5Q9UPZ3 1129 aa10.27□□□□□ -0.77
R3HDM1-212ENST00000456040 PACS2Q86VP3 889 aa10.26□□□□□ -0.77
R3HDM1-212ENST00000456040 GFRA3O60609 400 aa10.25□□□□□ -0.77
R3HDM1-212ENST00000456040 PPP4CP60510 307 aa10.24□□□□□ -0.77
R3HDM1-212ENST00000456040 RBM33Q96EV2 1170 aaKnown RBP10.23□□□□□ -0.77
R3HDM1-212ENST00000456040 TRAF7Q6Q0C0 670 aa10.22□□□□□ -0.77
R3HDM1-212ENST00000456040 BBXQ8WY36 941 aaPredicted RBP10.22□□□□□ -0.77
R3HDM1-212ENST00000456040 DPYSL4O14531 572 aa10.18□□□□□ -0.78
R3HDM1-212ENST00000456040 HDGFP51858 240 aaKnown RBP10.17□□□□□ -0.78
R3HDM1-212ENST00000456040 DDX12PQ92771 950 aa10.17□□□□□ -0.78
R3HDM1-212ENST00000456040 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.17□□□□□ -0.78
R3HDM1-212ENST00000456040 MAP3K7O43318 606 aa10.16□□□□□ -0.78
R3HDM1-212ENST00000456040 CAMK2BQ13554 666 aa10.15□□□□□ -0.78
R3HDM1-212ENST00000456040 PRKD2Q9BZL6 878 aa10.15□□□□□ -0.78
R3HDM1-212ENST00000456040 NRG2O14511 850 aaPredicted RBP10.14□□□□□ -0.79
R3HDM1-212ENST00000456040 IL21Q9HBE4 155 aa10.14□□□□□ -0.79
R3HDM1-212ENST00000456040 NBR1Q14596 966 aa10.13□□□□□ -0.79
R3HDM1-212ENST00000456040 CERKQ8TCT0 537 aa10.12□□□□□ -0.79
R3HDM1-212ENST00000456040 EN1Q05925 392 aaPredicted RBP10.11□□□□□ -0.79
R3HDM1-212ENST00000456040 NECTIN2Q92692 538 aa10.11□□□□□ -0.79
R3HDM1-212ENST00000456040 V9GY48 417 aaPredicted RBP10.11□□□□□ -0.79
R3HDM1-212ENST00000456040 GGCXP38435 758 aa10.1□□□□□ -0.79
R3HDM1-212ENST00000456040 CADPS2Q86UW7 1296 aa10.1□□□□□ -0.79
R3HDM1-212ENST00000456040 SPRYD3Q8NCJ5 442 aa10.1□□□□□ -0.79
R3HDM1-212ENST00000456040 TJAP1Q5JTD0 557 aa10.09□□□□□ -0.79
R3HDM1-212ENST00000456040 SAMD7Q7Z3H4 446 aa10.09□□□□□ -0.79
R3HDM1-212ENST00000456040 TSKSQ9UJT2 592 aa10.09□□□□□ -0.79
R3HDM1-212ENST00000456040 NBPF26B4DH59 902 aa10.08□□□□□ -0.8
R3HDM1-212ENST00000456040 CDCA7LQ96GN5 454 aa10.08□□□□□ -0.8
R3HDM1-212ENST00000456040 SPDYE16A6NNV3 312 aaPredicted RBP10.07□□□□□ -0.8
R3HDM1-212ENST00000456040 PRSS12P56730 875 aa10.07□□□□□ -0.8
R3HDM1-212ENST00000456040 PPP1R18Q6NYC8 613 aa10.07□□□□□ -0.8
R3HDM1-212ENST00000456040 MTRQ99707 1265 aa10.07□□□□□ -0.8
R3HDM1-212ENST00000456040 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.07□□□□□ -0.8
R3HDM1-212ENST00000456040 RNF40O75150 1001 aa10.06□□□□□ -0.8
R3HDM1-212ENST00000456040 TSR1Q2NL82 804 aaKnown RBP10.06□□□□□ -0.8
R3HDM1-212ENST00000456040 SLC4A3P48751 1232 aa10.05□□□□□ -0.8
R3HDM1-212ENST00000456040 ZNF787Q6DD87 383 aa10.05□□□□□ -0.8
R3HDM1-212ENST00000456040 PAXIP1Q6ZW49 1069 aaPredicted RBP10.05□□□□□ -0.8
R3HDM1-212ENST00000456040 PNMA3Q9UL41 463 aa10.05□□□□□ -0.8
R3HDM1-212ENST00000456040 SMAPO00193 183 aa10.04□□□□□ -0.8
R3HDM1-212ENST00000456040 CFAP44Q96MT7 982 aa10.04□□□□□ -0.8
R3HDM1-212ENST00000456040 PDZRN3Q9UPQ7 1066 aa10.04□□□□□ -0.8
R3HDM1-212ENST00000456040 TATDN2Q93075 761 aa10.03□□□□□ -0.8
R3HDM1-212ENST00000456040 PDIA6Q15084 440 aa10.02□□□□□ -0.81
R3HDM1-212ENST00000456040 LCE2BO14633 110 aa9.98□□□□□ -0.81
R3HDM1-212ENST00000456040 GRXCR2A6NFK2 248 aa9.97□□□□□ -0.81
R3HDM1-212ENST00000456040 NUDT18Q6ZVK8 323 aa9.97□□□□□ -0.81
R3HDM1-212ENST00000456040 SLF2Q8IX21 1173 aa9.97□□□□□ -0.81
R3HDM1-212ENST00000456040 ZNF516Q92618 1163 aa9.97□□□□□ -0.81
R3HDM1-212ENST00000456040 TMUB1Q9BVT8 246 aa9.97□□□□□ -0.81
R3HDM1-212ENST00000456040 PRR14Q9BWN1 585 aa9.95□□□□□ -0.82
R3HDM1-212ENST00000456040 APLP1P51693 650 aa9.94□□□□□ -0.82
R3HDM1-212ENST00000456040 WDR70Q9NW82 654 aa9.94□□□□□ -0.82
R3HDM1-212ENST00000456040 RBM27Q9P2N5 1060 aaKnown RBP9.94□□□□□ -0.82
R3HDM1-212ENST00000456040 COPS2P61201 443 aa9.93□□□□□ -0.82
R3HDM1-212ENST00000456040 FAM198AQ9UFP1 575 aa9.93□□□□□ -0.82
R3HDM1-212ENST00000456040 E2F4Q16254 413 aa9.92□□□□□ -0.82
R3HDM1-212ENST00000456040 PKDCCQ504Y2 493 aa9.9□□□□□ -0.82
R3HDM1-212ENST00000456040 NKX2-3Q8TAU0 364 aa9.9□□□□□ -0.82
R3HDM1-212ENST00000456040 PLCB2Q00722 1185 aa9.88□□□□□ -0.83
R3HDM1-212ENST00000456040 SWT1Q5T5J6 900 aaKnown RBP9.88□□□□□ -0.83
R3HDM1-212ENST00000456040 ZPR1O75312 459 aa9.87□□□□□ -0.83
R3HDM1-212ENST00000456040 SLC19A1P41440 591 aa9.87□□□□□ -0.83
R3HDM1-212ENST00000456040 ZNF775Q96BV0 537 aaPredicted RBP9.87□□□□□ -0.83
R3HDM1-212ENST00000456040 PCDHB3Q9Y5E6 796 aa9.87□□□□□ -0.83
R3HDM1-212ENST00000456040 C3orf80F5H4A9 247 aa9.85□□□□□ -0.83
R3HDM1-212ENST00000456040 ARIH1Q9Y4X5 557 aaPredicted RBP9.85□□□□□ -0.83
R3HDM1-212ENST00000456040 DGAT1O75907 488 aa9.84□□□□□ -0.83
R3HDM1-212ENST00000456040 OSBPP22059 807 aa9.83□□□□□ -0.84
R3HDM1-212ENST00000456040 CDHR5Q9HBB8 845 aa9.82□□□□□ -0.84
R3HDM1-212ENST00000456040 TSHZ2Q9NRE2 1034 aa9.82□□□□□ -0.84
R3HDM1-212ENST00000456040 PRIM1P49642 420 aaKnown RBP9.81□□□□□ -0.84
R3HDM1-212ENST00000456040 PADI6Q6TGC4 694 aa9.81□□□□□ -0.84
R3HDM1-212ENST00000456040 ZNF598Q86UK7 904 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms