RNA–Protein interactions for RNA: ENST00000453965.2

LINC01878-202, Transcript of long intergenic non-protein coding RNA 1878, humanhuman

TSL 3 BASIC

Gene LINC01878, Length 405 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01878-202ENST00000453965 PSDA5PKW4 1024 aaPredicted RBP10.47□□□□□ -0.73
LINC01878-202ENST00000453965 PSEN2P49810 448 aa10.47□□□□□ -0.73
LINC01878-202ENST00000453965 FBXW7Q969H0 707 aa10.47□□□□□ -0.73
LINC01878-202ENST00000453965 KCNK17Q96T54 332 aa10.47□□□□□ -0.73
LINC01878-202ENST00000453965 BCL2L12Q9HB09 334 aa10.47□□□□□ -0.73
LINC01878-202ENST00000453965 COL9A1P20849 921 aa10.46□□□□□ -0.73
LINC01878-202ENST00000453965 GPR37O15354 613 aa10.45□□□□□ -0.74
LINC01878-202ENST00000453965 C6orf132Q5T0Z8 1188 aa10.45□□□□□ -0.74
LINC01878-202ENST00000453965 ZNF687Q8N1G0 1237 aa10.45□□□□□ -0.74
LINC01878-202ENST00000453965 NUTM2FA1L443 756 aa10.44□□□□□ -0.74
LINC01878-202ENST00000453965 DMRTA1Q5VZB9 504 aa10.44□□□□□ -0.74
LINC01878-202ENST00000453965 SMYD5Q6GMV2 418 aa10.44□□□□□ -0.74
LINC01878-202ENST00000453965 KRTAP3-3Q9BYR6 98 aa10.42□□□□□ -0.74
LINC01878-202ENST00000453965 KRTAP3-2Q9BYR7 98 aa10.42□□□□□ -0.74
LINC01878-202ENST00000453965 NPDC1Q9NQX5 325 aaPredicted RBP10.42□□□□□ -0.74
LINC01878-202ENST00000453965 GPIHBP1Q8IV16 184 aa10.41□□□□□ -0.74
LINC01878-202ENST00000453965 PTPREP23469 700 aa10.4□□□□□ -0.74
LINC01878-202ENST00000453965 MMRN1Q13201 1228 aa10.4□□□□□ -0.74
LINC01878-202ENST00000453965 TULP1O00294 542 aaPredicted RBP10.39□□□□□ -0.75
LINC01878-202ENST00000453965 ARHGAP33O14559 1287 aa10.38□□□□□ -0.75
LINC01878-202ENST00000453965 PTGDRQ13258 359 aa10.38□□□□□ -0.75
LINC01878-202ENST00000453965 PROX2Q3B8N5 592 aa10.38□□□□□ -0.75
LINC01878-202ENST00000453965 PPP1R3GB7ZBB8 358 aa10.37□□□□□ -0.75
LINC01878-202ENST00000453965 FECHP22830 423 aa10.37□□□□□ -0.75
LINC01878-202ENST00000453965 PBX2P40425 430 aa10.36□□□□□ -0.75
LINC01878-202ENST00000453965 ZC3H15Q8WU90 426 aaKnown RBP10.36□□□□□ -0.75
LINC01878-202ENST00000453965 FAM198AQ9UFP1 575 aa10.36□□□□□ -0.75
LINC01878-202ENST00000453965 ZBED2Q9BTP6 218 aa10.35□□□□□ -0.75
LINC01878-202ENST00000453965 C3orf80F5H4A9 247 aa10.34□□□□□ -0.75
LINC01878-202ENST00000453965 LSM11P83369 360 aaKnown RBP eCLIP10.34□□□□□ -0.75
LINC01878-202ENST00000453965 SPNS2Q8IVW8 549 aa10.34□□□□□ -0.75
LINC01878-202ENST00000453965 PADI6Q6TGC4 694 aa10.33□□□□□ -0.76
LINC01878-202ENST00000453965 FCHSD2O94868 740 aa10.32□□□□□ -0.76
LINC01878-202ENST00000453965 TSKSQ9UJT2 592 aa10.32□□□□□ -0.76
LINC01878-202ENST00000453965 PRKCSHP14314 528 aaPredicted RBP10.31□□□□□ -0.76
LINC01878-202ENST00000453965 FAM161AQ3B820 660 aa10.31□□□□□ -0.76
LINC01878-202ENST00000453965 CDCA7LQ96GN5 454 aa10.31□□□□□ -0.76
LINC01878-202ENST00000453965 PRSS12P56730 875 aa10.3□□□□□ -0.76
LINC01878-202ENST00000453965 TPRNQ4KMQ1 711 aa10.3□□□□□ -0.76
LINC01878-202ENST00000453965 ANKRD13DQ6ZTN6 518 aa10.3□□□□□ -0.76
LINC01878-202ENST00000453965 VPS9D1Q9Y2B5 631 aa10.3□□□□□ -0.76
LINC01878-202ENST00000453965 GNPATO15228 680 aa10.29□□□□□ -0.76
LINC01878-202ENST00000453965 HIC1Q14526 733 aa10.29□□□□□ -0.76
LINC01878-202ENST00000453965 KCNH8Q96L42 1107 aa10.29□□□□□ -0.76
LINC01878-202ENST00000453965 TRIM6-TRIM34B2RNG4 842 aa10.28□□□□□ -0.76
LINC01878-202ENST00000453965 ADGRD1Q6QNK2 874 aa10.28□□□□□ -0.76
LINC01878-202ENST00000453965 TTC13Q8NBP0 860 aa10.28□□□□□ -0.76
LINC01878-202ENST00000453965 ZMYND10O75800 440 aa10.27□□□□□ -0.77
LINC01878-202ENST00000453965 CERKQ8TCT0 537 aa10.26□□□□□ -0.77
LINC01878-202ENST00000453965 SMAPO00193 183 aa10.25□□□□□ -0.77
LINC01878-202ENST00000453965 KIAA1468Q9P260 1216 aa10.25□□□□□ -0.77
LINC01878-202ENST00000453965 BARGINQ6ZT62 677 aa10.24□□□□□ -0.77
LINC01878-202ENST00000453965 SLC4A5Q9BY07 1137 aa10.24□□□□□ -0.77
LINC01878-202ENST00000453965 RBM27Q9P2N5 1060 aaKnown RBP10.24□□□□□ -0.77
LINC01878-202ENST00000453965 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
LINC01878-202ENST00000453965 HRO43593 1189 aa10.23□□□□□ -0.77
LINC01878-202ENST00000453965 TK2O00142 265 aa10.22□□□□□ -0.77
LINC01878-202ENST00000453965 ADGRG1Q9Y653 693 aa10.22□□□□□ -0.77
LINC01878-202ENST00000453965 BHMG1C9JSJ3 638 aaPredicted RBP10.21□□□□□ -0.77
LINC01878-202ENST00000453965 NLRP7Q8WX94 980 aa10.21□□□□□ -0.77
LINC01878-202ENST00000453965 RABGEF1Q9UJ41 708 aa10.21□□□□□ -0.77
LINC01878-202ENST00000453965 MAP2K5Q13163 448 aa10.2□□□□□ -0.78
LINC01878-202ENST00000453965 NUDT18Q6ZVK8 323 aa10.2□□□□□ -0.78
LINC01878-202ENST00000453965 CCDC102AQ96A19 550 aa10.2□□□□□ -0.78
LINC01878-202ENST00000453965 PHOX2BQ99453 314 aa10.2□□□□□ -0.78
LINC01878-202ENST00000453965 SLC24A3Q9HC58 644 aa10.2□□□□□ -0.78
LINC01878-202ENST00000453965 TATDN2Q93075 761 aa10.19□□□□□ -0.78
LINC01878-202ENST00000453965 PNMA3Q9UL41 463 aa10.19□□□□□ -0.78
LINC01878-202ENST00000453965 NBPF26B4DH59 902 aa10.17□□□□□ -0.78
LINC01878-202ENST00000453965 IRF6O14896 467 aa10.17□□□□□ -0.78
LINC01878-202ENST00000453965 PACS2Q86VP3 889 aa10.17□□□□□ -0.78
LINC01878-202ENST00000453965 EYA1Q99502 592 aa10.17□□□□□ -0.78
LINC01878-202ENST00000453965 ONECUT3O60422 494 aaPredicted RBP10.16□□□□□ -0.78
LINC01878-202ENST00000453965 METTL3Q86U44 580 aaKnown RBP10.16□□□□□ -0.78
LINC01878-202ENST00000453965 KRI1Q8N9T8 703 aaKnown RBP10.16□□□□□ -0.78
LINC01878-202ENST00000453965 PXYLP1Q8TE99 480 aa10.15□□□□□ -0.78
LINC01878-202ENST00000453965 MINK1Q8N4C8 1332 aaPredicted RBP10.14□□□□□ -0.79
LINC01878-202ENST00000453965 NBPF3Q9H094 633 aa10.13□□□□□ -0.79
LINC01878-202ENST00000453965 MRPL50Q8N5N7 158 aaKnown RBP10.12□□□□□ -0.79
LINC01878-202ENST00000453965 RCCD1A6NED2 376 aa10.11□□□□□ -0.79
LINC01878-202ENST00000453965 FAM98CQ17RN3 349 aaKnown RBP10.11□□□□□ -0.79
LINC01878-202ENST00000453965 RBM46Q8TBY0 533 aaKnown RBP10.1□□□□□ -0.79
LINC01878-202ENST00000453965 TRIM66O15016 1216 aa10.09□□□□□ -0.79
LINC01878-202ENST00000453965 ZFRQ96KR1 1074 aaKnown RBP10.09□□□□□ -0.79
LINC01878-202ENST00000453965 OATP04181 439 aa10.08□□□□□ -0.8
LINC01878-202ENST00000453965 AK7Q96M32 723 aa10.08□□□□□ -0.8
LINC01878-202ENST00000453965 REPIN1Q9BWE0 567 aaKnown RBP10.08□□□□□ -0.8
LINC01878-202ENST00000453965 SAMD7Q7Z3H4 446 aa10.07□□□□□ -0.8
LINC01878-202ENST00000453965 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
LINC01878-202ENST00000453965 DNAJB2P25686 324 aa10.06□□□□□ -0.8
LINC01878-202ENST00000453965 BCAMP50895 628 aa10.06□□□□□ -0.8
LINC01878-202ENST00000453965 MDM2Q00987 491 aaPredicted RBP10.06□□□□□ -0.8
LINC01878-202ENST00000453965 SWT1Q5T5J6 900 aaKnown RBP10.06□□□□□ -0.8
LINC01878-202ENST00000453965 TMEM134Q9H6X4 195 aa10.06□□□□□ -0.8
LINC01878-202ENST00000453965 MYT1LQ9UL68 1186 aa10.06□□□□□ -0.8
LINC01878-202ENST00000453965 KCTD12Q96CX2 325 aaKnown RBP10.05□□□□□ -0.8
LINC01878-202ENST00000453965 STAC3Q96MF2 364 aa10.05□□□□□ -0.8
LINC01878-202ENST00000453965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.04□□□□□ -0.8
LINC01878-202ENST00000453965 WNT2BQ93097 391 aa10.04□□□□□ -0.8
LINC01878-202ENST00000453965 AMHR2Q16671 573 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms