RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 NUTM2FA1L443 756 aa8.7□□□□□ -1.02
VPS8-211ENST00000452140 GPR37O15354 613 aa8.68□□□□□ -1.02
VPS8-211ENST00000452140 BARGINQ6ZT62 677 aa8.68□□□□□ -1.02
VPS8-211ENST00000452140 KRI1Q8N9T8 703 aaKnown RBP8.66□□□□□ -1.02
VPS8-211ENST00000452140 ANO8Q9HCE9 1232 aaPredicted RBP8.66□□□□□ -1.02
VPS8-211ENST00000452140 BRPF1P55201 1214 aaPredicted RBP8.64□□□□□ -1.03
VPS8-211ENST00000452140 RBM33Q96EV2 1170 aaKnown RBP8.64□□□□□ -1.03
VPS8-211ENST00000452140 AXIN2Q9Y2T1 843 aa8.64□□□□□ -1.03
VPS8-211ENST00000452140 ARHGAP33O14559 1287 aa8.63□□□□□ -1.03
VPS8-211ENST00000452140 CDHR5Q9HBB8 845 aa8.63□□□□□ -1.03
VPS8-211ENST00000452140 KDM4FA0A1W2PPD8 638 aa8.62□□□□□ -1.03
VPS8-211ENST00000452140 NEUROD2Q15784 382 aa8.62□□□□□ -1.03
VPS8-211ENST00000452140 PCDHGA10Q9Y5H3 936 aa8.62□□□□□ -1.03
VPS8-211ENST00000452140 PHF14O94880 888 aa8.61□□□□□ -1.03
VPS8-211ENST00000452140 FECHP22830 423 aa8.61□□□□□ -1.03
VPS8-211ENST00000452140 POTEEQ6S8J3 1075 aa8.61□□□□□ -1.03
VPS8-211ENST00000452140 MAP3K7O43318 606 aa8.6□□□□□ -1.03
VPS8-211ENST00000452140 FCHSD2O94868 740 aa8.6□□□□□ -1.03
VPS8-211ENST00000452140 EN1Q05925 392 aaPredicted RBP8.6□□□□□ -1.03
VPS8-211ENST00000452140 TSR1Q2NL82 804 aaKnown RBP8.6□□□□□ -1.03
VPS8-211ENST00000452140 AK7Q96M32 723 aa8.6□□□□□ -1.03
VPS8-211ENST00000452140 PPP4R3BQ5MIZ7 849 aa8.59□□□□□ -1.03
VPS8-211ENST00000452140 ADGRD1Q6QNK2 874 aa8.59□□□□□ -1.03
VPS8-211ENST00000452140 EPAS1Q99814 870 aa8.59□□□□□ -1.03
VPS8-211ENST00000452140 GNPATO15228 680 aa8.58□□□□□ -1.04
VPS8-211ENST00000452140 PTGDRQ13258 359 aa8.58□□□□□ -1.04
VPS8-211ENST00000452140 TYW1BQ6NUM6 668 aa8.58□□□□□ -1.04
VPS8-211ENST00000452140 ZNF454Q8N9F8 522 aa8.58□□□□□ -1.04
VPS8-211ENST00000452140 JPH4Q96JJ6 628 aa8.58□□□□□ -1.04
VPS8-211ENST00000452140 TK2O00142 265 aa8.57□□□□□ -1.04
VPS8-211ENST00000452140 FOSBP53539 338 aa8.57□□□□□ -1.04
VPS8-211ENST00000452140 KCNH8Q96L42 1107 aa8.57□□□□□ -1.04
VPS8-211ENST00000452140 TRIM66O15016 1216 aa8.56□□□□□ -1.04
VPS8-211ENST00000452140 HIC1Q14526 733 aa8.56□□□□□ -1.04
VPS8-211ENST00000452140 CCDC102AQ96A19 550 aa8.56□□□□□ -1.04
VPS8-211ENST00000452140 GPBP1L1Q9HC44 474 aaPredicted RBP8.56□□□□□ -1.04
VPS8-211ENST00000452140 HCSTQ9UBK5 93 aa8.56□□□□□ -1.04
VPS8-211ENST00000452140 MAP2K5Q13163 448 aa8.55□□□□□ -1.04
VPS8-211ENST00000452140 STAC3Q96MF2 364 aa8.55□□□□□ -1.04
VPS8-211ENST00000452140 NPDC1Q9NQX5 325 aaPredicted RBP8.55□□□□□ -1.04
VPS8-211ENST00000452140 IRF6O14896 467 aa8.54□□□□□ -1.04
VPS8-211ENST00000452140 FBXW7Q969H0 707 aa8.54□□□□□ -1.04
VPS8-211ENST00000452140 MINK1Q8N4C8 1332 aaPredicted RBP8.54□□□□□ -1.04
VPS8-211ENST00000452140 PSEN2P49810 448 aa8.53□□□□□ -1.04
VPS8-211ENST00000452140 ZDHHC16Q969W1 377 aa8.53□□□□□ -1.04
VPS8-211ENST00000452140 ADAM33Q9BZ11 813 aa8.53□□□□□ -1.04
VPS8-211ENST00000452140 PDE4DQ08499 809 aa8.52□□□□□ -1.05
VPS8-211ENST00000452140 C6orf132Q5T0Z8 1188 aa8.51□□□□□ -1.05
VPS8-211ENST00000452140 DMRTA1Q5VZB9 504 aa8.51□□□□□ -1.05
VPS8-211ENST00000452140 HRO43593 1189 aa8.5□□□□□ -1.05
VPS8-211ENST00000452140 TMEM132AQ24JP5 1023 aa8.5□□□□□ -1.05
VPS8-211ENST00000452140 FAM161AQ3B820 660 aa8.49□□□□□ -1.05
VPS8-211ENST00000452140 KCNK17Q96T54 332 aa8.49□□□□□ -1.05
VPS8-211ENST00000452140 KDM4CQ9H3R0 1056 aa8.48□□□□□ -1.05
VPS8-211ENST00000452140 PLA2G2EQ9NZK7 142 aa8.48□□□□□ -1.05
VPS8-211ENST00000452140 PADI6Q6TGC4 694 aa8.47□□□□□ -1.05
VPS8-211ENST00000452140 COL9A1P20849 921 aa8.45□□□□□ -1.06
VPS8-211ENST00000452140 TTLL12Q14166 644 aaPredicted RBP8.45□□□□□ -1.06
VPS8-211ENST00000452140 PARP9Q8IXQ6 854 aa8.45□□□□□ -1.06
VPS8-211ENST00000452140 BCL2L12Q9HB09 334 aa8.45□□□□□ -1.06
VPS8-211ENST00000452140 AMHR2Q16671 573 aa8.44□□□□□ -1.06
VPS8-211ENST00000452140 IL27Q8NEV9 243 aa8.44□□□□□ -1.06
VPS8-211ENST00000452140 VPS9D1Q9Y2B5 631 aa8.44□□□□□ -1.06
VPS8-211ENST00000452140 PTPREP23469 700 aa8.43□□□□□ -1.06
VPS8-211ENST00000452140 NLRP7Q8WX94 980 aa8.43□□□□□ -1.06
VPS8-211ENST00000452140 KCTD12Q96CX2 325 aaKnown RBP8.43□□□□□ -1.06
VPS8-211ENST00000452140 PHOX2BQ99453 314 aa8.43□□□□□ -1.06
VPS8-211ENST00000452140 SLC4A5Q9BY07 1137 aa8.43□□□□□ -1.06
VPS8-211ENST00000452140 CERKQ8TCT0 537 aa8.42□□□□□ -1.06
VPS8-211ENST00000452140 PRSS12P56730 875 aa8.41□□□□□ -1.06
VPS8-211ENST00000452140 CDCA7LQ96GN5 454 aa8.41□□□□□ -1.06
VPS8-211ENST00000452140 REPIN1Q9BWE0 567 aaKnown RBP8.41□□□□□ -1.06
VPS8-211ENST00000452140 FAM117AQ9C073 453 aa8.41□□□□□ -1.06
VPS8-211ENST00000452140 GTF3C3Q9Y5Q9 886 aa8.41□□□□□ -1.06
VPS8-211ENST00000452140 ADGRG1Q9Y653 693 aa8.41□□□□□ -1.06
VPS8-211ENST00000452140 MDM2Q00987 491 aaPredicted RBP8.4□□□□□ -1.06
VPS8-211ENST00000452140 GIGYF2Q6Y7W6 1299 aaKnown RBP8.4□□□□□ -1.06
VPS8-211ENST00000452140 FAM198AQ9UFP1 575 aa8.4□□□□□ -1.06
VPS8-211ENST00000452140 PPP1R3GB7ZBB8 358 aa8.39□□□□□ -1.07
VPS8-211ENST00000452140 METTL3Q86U44 580 aaKnown RBP8.39□□□□□ -1.07
VPS8-211ENST00000452140 TTC13Q8NBP0 860 aa8.39□□□□□ -1.07
VPS8-211ENST00000452140 GOLGA8CPA6NN73 597 aa8.38□□□□□ -1.07
VPS8-211ENST00000452140 RBM27Q9P2N5 1060 aaKnown RBP8.38□□□□□ -1.07
VPS8-211ENST00000452140 TSKSQ9UJT2 592 aa8.38□□□□□ -1.07
VPS8-211ENST00000452140 MS4A1P11836 297 aa8.37□□□□□ -1.07
VPS8-211ENST00000452140 PXYLP1Q8TE99 480 aa8.37□□□□□ -1.07
VPS8-211ENST00000452140 C3orf80F5H4A9 247 aa8.36□□□□□ -1.07
VPS8-211ENST00000452140 OATP04181 439 aa8.36□□□□□ -1.07
VPS8-211ENST00000452140 PTPN5P54829 565 aa8.36□□□□□ -1.07
VPS8-211ENST00000452140 PROX2Q3B8N5 592 aa8.36□□□□□ -1.07
VPS8-211ENST00000452140 MRPL50Q8N5N7 158 aaKnown RBP8.36□□□□□ -1.07
VPS8-211ENST00000452140 ZBED2Q9BTP6 218 aa8.36□□□□□ -1.07
VPS8-211ENST00000452140 PLEKHG3A1L390 1219 aa8.35□□□□□ -1.07
VPS8-211ENST00000452140 BHMG1C9JSJ3 638 aaPredicted RBP8.35□□□□□ -1.07
VPS8-211ENST00000452140 CLCN1P35523 988 aa8.35□□□□□ -1.07
VPS8-211ENST00000452140 NBPF3Q9H094 633 aa8.35□□□□□ -1.07
VPS8-211ENST00000452140 GPCPD1Q9NPB8 672 aa8.35□□□□□ -1.07
VPS8-211ENST00000452140 TMUB1Q9BVT8 246 aa8.34□□□□□ -1.07
VPS8-211ENST00000452140 TRIM6-TRIM34B2RNG4 842 aa8.33□□□□□ -1.08
VPS8-211ENST00000452140 SMAPO00193 183 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms