RNA–Protein interactions for RNA: ENST00000449988.1

PHF20-205, Transcript of PHD finger protein 20, humanhuman

TSL 4

Gene PHF20, Length 539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-205ENST00000449988 ROBO1Q9Y6N7 1651 aa12.54□□□□□ -0.4
PHF20-205ENST00000449988 ZNF772Q68DY9 489 aaPredicted RBP12.54□□□□□ -0.4
PHF20-205ENST00000449988 CLIP1P30622 1438 aa12.54□□□□□ -0.4
PHF20-205ENST00000449988 SAMD9LQ8IVG5 1584 aa12.53□□□□□ -0.4
PHF20-205ENST00000449988 TRIM52Q96A61 297 aa12.53□□□□□ -0.4
PHF20-205ENST00000449988 FAM135AQ9P2D6 1515 aa12.52□□□□□ -0.4
PHF20-205ENST00000449988 TNRQ92752 1358 aa12.52□□□□□ -0.41
PHF20-205ENST00000449988 CDK12Q9NYV4 1490 aaPredicted RBP12.52□□□□□ -0.41
PHF20-205ENST00000449988 UGGT1Q9NYU2 1555 aa12.52□□□□□ -0.41
PHF20-205ENST00000449988 GGT6Q6P531 493 aa12.51□□□□□ -0.41
PHF20-205ENST00000449988 TROQ12816 1431 aaPredicted RBP12.51□□□□□ -0.41
PHF20-205ENST00000449988 ZC3H13Q5T200 1668 aaKnown RBP12.51□□□□□ -0.41
PHF20-205ENST00000449988 ADGBQ8N7X0 1667 aa12.51□□□□□ -0.41
PHF20-205ENST00000449988 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
PHF20-205ENST00000449988 NCBP3Q53F19 620 aaKnown RBP12.5□□□□□ -0.41
PHF20-205ENST00000449988 NLRP1Q9C000 1473 aa12.5□□□□□ -0.41
PHF20-205ENST00000449988 ATP7AQ04656 1500 aa12.49□□□□□ -0.41
PHF20-205ENST00000449988 KDM5DQ9BY66 1539 aa12.49□□□□□ -0.41
PHF20-205ENST00000449988 A2MP01023 1474 aa12.49□□□□□ -0.41
PHF20-205ENST00000449988 JCADQ9P266 1359 aa12.49□□□□□ -0.41
PHF20-205ENST00000449988 CDC42BPAQ5VT25 1732 aa12.48□□□□□ -0.41
PHF20-205ENST00000449988 SPAG9O60271 1321 aaKnown RBP12.48□□□□□ -0.41
PHF20-205ENST00000449988 RXRBP28702 533 aa12.48□□□□□ -0.41
PHF20-205ENST00000449988 RANGAP1P46060 587 aaPredicted RBP12.48□□□□□ -0.41
PHF20-205ENST00000449988 LRRC9Q6ZRR7 1453 aa12.47□□□□□ -0.41
PHF20-205ENST00000449988 HOXD11P31277 338 aaPredicted RBP12.47□□□□□ -0.41
PHF20-205ENST00000449988 ZRANB1Q9UGI0 708 aa12.47□□□□□ -0.41
PHF20-205ENST00000449988 PZPP20742 1482 aa12.46□□□□□ -0.41
PHF20-205ENST00000449988 INO80Q9ULG1 1556 aaPredicted RBP12.46□□□□□ -0.42
PHF20-205ENST00000449988 RNF216Q9NWF9 866 aaPredicted RBP12.45□□□□□ -0.42
PHF20-205ENST00000449988 MEX3CQ5U5Q3 659 aaKnown RBP12.44□□□□□ -0.42
PHF20-205ENST00000449988 ATP1B4Q9UN42 357 aaPredicted RBP12.44□□□□□ -0.42
PHF20-205ENST00000449988 SPATA31A6Q5VVP1 1343 aa12.43□□□□□ -0.42
PHF20-205ENST00000449988 MIA2Q96PC5 1412 aa12.43□□□□□ -0.42
PHF20-205ENST00000449988 FBXO31Q5XUX0 539 aaPredicted RBP12.42□□□□□ -0.42
PHF20-205ENST00000449988 FMN1Q68DA7 1419 aa12.42□□□□□ -0.42
PHF20-205ENST00000449988 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
PHF20-205ENST00000449988 DCAF8L1A6NGE4 600 aa12.41□□□□□ -0.42
PHF20-205ENST00000449988 LRRIQ1Q96JM4 1722 aa12.4□□□□□ -0.42
PHF20-205ENST00000449988 FGD6Q6ZV73 1430 aa12.4□□□□□ -0.42
PHF20-205ENST00000449988 SHPRHQ149N8 1683 aa12.4□□□□□ -0.42
PHF20-205ENST00000449988 SETBP1Q9Y6X0 1596 aa12.39□□□□□ -0.43
PHF20-205ENST00000449988 LRP6O75581 1613 aa12.39□□□□□ -0.43
PHF20-205ENST00000449988 COL16A1Q07092 1604 aaPredicted RBP12.39□□□□□ -0.43
PHF20-205ENST00000449988 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
PHF20-205ENST00000449988 PLEKHH2Q8IVE3 1493 aa12.37□□□□□ -0.43
PHF20-205ENST00000449988 SCAF11Q99590 1463 aaKnown RBP12.37□□□□□ -0.43
PHF20-205ENST00000449988 UBR1Q8IWV7 1749 aa12.37□□□□□ -0.43
PHF20-205ENST00000449988 RBM33Q96EV2 1170 aaKnown RBP12.36□□□□□ -0.43
PHF20-205ENST00000449988 CFAP65Q6ZU64 1925 aaKnown RBP12.36□□□□□ -0.43
PHF20-205ENST00000449988 KIAA1107Q9UPP5 1409 aa12.36□□□□□ -0.43
PHF20-205ENST00000449988 TMEM94Q12767 1356 aa12.35□□□□□ -0.43
PHF20-205ENST00000449988 ZNF777Q9ULD5 760 aaPredicted RBP12.35□□□□□ -0.43
PHF20-205ENST00000449988 LRP5O75197 1615 aa12.34□□□□□ -0.43
PHF20-205ENST00000449988 ATAD2Q6PL18 1390 aa12.34□□□□□ -0.43
PHF20-205ENST00000449988 NUTM2BA6NNL0 878 aaPredicted RBP12.34□□□□□ -0.43
PHF20-205ENST00000449988 NUTM2EB1AL46 878 aaPredicted RBP12.34□□□□□ -0.43
PHF20-205ENST00000449988 HNRNPMP52272 730 aaKnown RBP eCLIP12.34□□□□□ -0.436e-7■■■■□ 24.9
PHF20-205ENST00000449988 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
PHF20-205ENST00000449988 NUTM2AQ8IVF1 878 aaPredicted RBP12.34□□□□□ -0.43
PHF20-205ENST00000449988 WASHC2CQ9Y4E1 1318 aa12.34□□□□□ -0.43
PHF20-205ENST00000449988 MAP3K1Q13233 1512 aa12.33□□□□□ -0.44
PHF20-205ENST00000449988 RGS12O14924 1447 aa12.32□□□□□ -0.44
PHF20-205ENST00000449988 SLAIN2Q9P270 581 aa12.32□□□□□ -0.44
PHF20-205ENST00000449988 ABCC3O15438 1527 aa12.32□□□□□ -0.44
PHF20-205ENST00000449988 MSH6P52701 1360 aa12.31□□□□□ -0.44
PHF20-205ENST00000449988 TIAM1Q13009 1591 aa12.31□□□□□ -0.44
PHF20-205ENST00000449988 RBM6P78332 1123 aaKnown RBP12.31□□□□□ -0.44
PHF20-205ENST00000449988 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
PHF20-205ENST00000449988 PROSER2Q86WR7 435 aaPredicted RBP12.3□□□□□ -0.44
PHF20-205ENST00000449988 SLIT1O75093 1534 aa12.3□□□□□ -0.44
PHF20-205ENST00000449988 CCDC18Q5T9S5 1454 aa12.29□□□□□ -0.44
PHF20-205ENST00000449988 ARHGAP23Q9P227 1491 aa12.29□□□□□ -0.44
PHF20-205ENST00000449988 PRDM15P57071 1507 aaPredicted RBP12.29□□□□□ -0.44
PHF20-205ENST00000449988 KIF3BO15066 747 aa12.29□□□□□ -0.44
PHF20-205ENST00000449988 TXNDC2Q86VQ3 553 aa12.29□□□□□ -0.44
PHF20-205ENST00000449988 CCDC125Q86Z20 511 aa12.29□□□□□ -0.44
PHF20-205ENST00000449988 EID1Q9Y6B2 187 aa12.29□□□□□ -0.44
PHF20-205ENST00000449988 AFF2P51816 1311 aa12.29□□□□□ -0.44
PHF20-205ENST00000449988 RTEL1-TNFRSF6BF6WH68 1400 aa12.28□□□□□ -0.44
PHF20-205ENST00000449988 NKTRP30414 1462 aaKnown RBP12.28□□□□□ -0.44
PHF20-205ENST00000449988 EP400Q96L91 3159 aa12.28□□□□□ -0.44
PHF20-205ENST00000449988 NPM3O75607 178 aaKnown RBP12.28□□□□□ -0.44
PHF20-205ENST00000449988 KCNA6P17658 529 aa12.28□□□□□ -0.44
PHF20-205ENST00000449988 IFFO2Q5TF58 517 aa12.28□□□□□ -0.44
PHF20-205ENST00000449988 AHDC1Q5TGY3 1603 aaPredicted RBP12.28□□□□□ -0.44
PHF20-205ENST00000449988 KDM5AP29375 1690 aaKnown RBP12.27□□□□□ -0.45
PHF20-205ENST00000449988 NGLY1Q96IV0 654 aa12.27□□□□□ -0.45
PHF20-205ENST00000449988 GPATCH8Q9UKJ3 1502 aaKnown RBP12.27□□□□□ -0.45
PHF20-205ENST00000449988 LTKP29376 864 aa12.26□□□□□ -0.45
PHF20-205ENST00000449988 QTRT2Q9H974 415 aaKnown RBP12.26□□□□□ -0.45
PHF20-205ENST00000449988 ERVK-7P63135 1459 aa12.24□□□□□ -0.45
PHF20-205ENST00000449988 NWD1Q149M9 1564 aa12.24□□□□□ -0.45
PHF20-205ENST00000449988 CFDP1Q9UEE9 299 aaPredicted RBP12.24□□□□□ -0.45
PHF20-205ENST00000449988 NCOA2Q15596 1464 aa12.23□□□□□ -0.45
PHF20-205ENST00000449988 EEA1Q15075 1411 aa12.23□□□□□ -0.45
PHF20-205ENST00000449988 KCNA4P22459 653 aa12.22□□□□□ -0.45
PHF20-205ENST00000449988 CHD2O14647 1828 aaKnown RBP12.21□□□□□ -0.45
PHF20-205ENST00000449988 DIP2AQ14689 1571 aa12.21□□□□□ -0.46
PHF20-205ENST00000449988 ARHGAP35Q9NRY4 1499 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms