RNA–Protein interactions for RNA: ENST00000448424.6

ATP7B-206, Transcript of ATPase copper transporting beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATP7B, Length 6,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-206ENST00000448424 SIN3AQ96ST3 1273 aa11.54□□□□□ -0.56
ATP7B-206ENST00000448424 EVA1CP58658 441 aa11.54□□□□□ -0.56
ATP7B-206ENST00000448424 ATAD2BQ9ULI0 1458 aa11.54□□□□□ -0.56
ATP7B-206ENST00000448424 TPM3P06753 285 aa11.53□□□□□ -0.56
ATP7B-206ENST00000448424 FOXD1Q16676 465 aa11.53□□□□□ -0.56
ATP7B-206ENST00000448424 CALRP27797 417 aaKnown RBP11.53□□□□□ -0.56
ATP7B-206ENST00000448424 DHX37Q8IY37 1157 aaKnown RBP11.53□□□□□ -0.56
ATP7B-206ENST00000448424 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.53□□□□□ -0.562e-6■■■■■ 150.2
ATP7B-206ENST00000448424 TCEAL9Q9UHQ7 104 aa11.53□□□□□ -0.56
ATP7B-206ENST00000448424 NGEFQ8N5V2 710 aa11.52□□□□□ -0.57
ATP7B-206ENST00000448424 NUP155O75694 1391 aa11.52□□□□□ -0.57
ATP7B-206ENST00000448424 ARHGAP35Q9NRY4 1499 aa11.52□□□□□ -0.57
ATP7B-206ENST00000448424 PPP4R2Q9NY27 417 aa11.52□□□□□ -0.57
ATP7B-206ENST00000448424 ZNF592Q92610 1267 aa11.51□□□□□ -0.57
ATP7B-206ENST00000448424 ANKRD30AQ9BXX3 1397 aa11.51□□□□□ -0.57
ATP7B-206ENST00000448424 PCMTD1Q96MG8 357 aaPredicted RBP11.51□□□□□ -0.57
ATP7B-206ENST00000448424 FMN1Q68DA7 1419 aa11.51□□□□□ -0.57
ATP7B-206ENST00000448424 CWC22Q9HCG8 908 aaKnown RBP11.5□□□□□ -0.57
ATP7B-206ENST00000448424 SETQ01105 290 aaPredicted RBP11.5□□□□□ -0.57
ATP7B-206ENST00000448424 SF3A1Q15459 793 aaKnown RBP11.5□□□□□ -0.57
ATP7B-206ENST00000448424 SKIDA1Q1XH10 827 aa11.5□□□□□ -0.57
ATP7B-206ENST00000448424 KDM4AO75164 1064 aa11.5□□□□□ -0.57
ATP7B-206ENST00000448424 CHMP4BQ9H444 224 aaKnown RBP11.49□□□□□ -0.57
ATP7B-206ENST00000448424 CTDP1Q9Y5B0 961 aaPredicted RBP11.49□□□□□ -0.57
ATP7B-206ENST00000448424 FOSBP53539 338 aa11.49□□□□□ -0.57
ATP7B-206ENST00000448424 WIZO95785 1651 aa11.49□□□□□ -0.57
ATP7B-206ENST00000448424 VSIG10Q8N0Z9 540 aa11.49□□□□□ -0.57
ATP7B-206ENST00000448424 CLUAP1Q96AJ1 413 aa11.48□□□□□ -0.57
ATP7B-206ENST00000448424 GBP4Q96PP9 640 aa11.47□□□□□ -0.57
ATP7B-206ENST00000448424 FHOD3Q2V2M9 1422 aa11.47□□□□□ -0.57
ATP7B-206ENST00000448424 TOP2AP11388 1531 aaKnown RBP11.47□□□□□ -0.57
ATP7B-206ENST00000448424 MS4A1P11836 297 aa11.47□□□□□ -0.57
ATP7B-206ENST00000448424 RAPGEF2Q9Y4G8 1499 aa11.46□□□□□ -0.57
ATP7B-206ENST00000448424 DCAF8L1A6NGE4 600 aa11.46□□□□□ -0.57
ATP7B-206ENST00000448424 DHX16O60231 1041 aaKnown RBP11.46□□□□□ -0.57
ATP7B-206ENST00000448424 AMPHP49418 695 aa11.46□□□□□ -0.57
ATP7B-206ENST00000448424 RSPH4AQ5TD94 716 aa11.46□□□□□ -0.58
ATP7B-206ENST00000448424 HTATSF1O43719 755 aaKnown RBP11.45□□□□□ -0.58
ATP7B-206ENST00000448424 RRP12Q5JTH9 1297 aaKnown RBP11.45□□□□□ -0.58
ATP7B-206ENST00000448424 MCTP1Q6DN14 999 aa11.45□□□□□ -0.58
ATP7B-206ENST00000448424 MTMR7Q9Y216 660 aa11.45□□□□□ -0.58
ATP7B-206ENST00000448424 U2AF1L5P0DN76 240 aaPredicted RBP11.45□□□□□ -0.58
ATP7B-206ENST00000448424 U2AF1Q01081 240 aaKnown RBP eCLIP11.45□□□□□ -0.58
ATP7B-206ENST00000448424 TRIM34Q9BYJ4 488 aa11.45□□□□□ -0.58
ATP7B-206ENST00000448424 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.583e-6■■□□□ 13.8
ATP7B-206ENST00000448424 H3BQV1 296 aa11.44□□□□□ -0.58
ATP7B-206ENST00000448424 IFFO2Q5TF58 517 aa11.44□□□□□ -0.58
ATP7B-206ENST00000448424 CCDC146Q8IYE0 955 aa11.44□□□□□ -0.58
ATP7B-206ENST00000448424 RILPL2Q969X0 211 aa11.44□□□□□ -0.58
ATP7B-206ENST00000448424 ATF3P18847 181 aa11.43□□□□□ -0.58
ATP7B-206ENST00000448424 TSR1Q2NL82 804 aaKnown RBP11.43□□□□□ -0.58
ATP7B-206ENST00000448424 CCDC18Q5T9S5 1454 aa11.43□□□□□ -0.58
ATP7B-206ENST00000448424 SLC4A3P48751 1232 aa11.43□□□□□ -0.58
ATP7B-206ENST00000448424 GOLGA6L3A6NEY3 463 aa11.42□□□□□ -0.58
ATP7B-206ENST00000448424 PAF1Q8N7H5 531 aa11.42□□□□□ -0.58
ATP7B-206ENST00000448424 ROCK2O75116 1388 aaKnown RBP11.42□□□□□ -0.58
ATP7B-206ENST00000448424 CALD1Q05682 793 aaKnown RBP11.42□□□□□ -0.58
ATP7B-206ENST00000448424 ZFYVE27Q5T4F4 411 aa11.42□□□□□ -0.58
ATP7B-206ENST00000448424 ZNF771Q7L3S4 317 aaPredicted RBP11.42□□□□□ -0.58
ATP7B-206ENST00000448424 SYAP1Q96A49 352 aaPredicted RBP11.42□□□□□ -0.58
ATP7B-206ENST00000448424 GPATCH3Q96I76 525 aa11.42□□□□□ -0.58
ATP7B-206ENST00000448424 PLCD4Q9BRC7 762 aa11.42□□□□□ -0.58
ATP7B-206ENST00000448424 NAP1L1P55209 391 aaKnown RBP11.41□□□□□ -0.58
ATP7B-206ENST00000448424 KANK4Q5T7N3 995 aaPredicted RBP11.41□□□□□ -0.58
ATP7B-206ENST00000448424 TRAK1Q9UPV9 953 aa11.41□□□□□ -0.58
ATP7B-206ENST00000448424 AQRO60306 1485 aaKnown RBP eCLIP11.41□□□□□ -0.582e-6■■■■■ 28
ATP7B-206ENST00000448424 SYTL4Q96C24 671 aaPredicted RBP11.41□□□□□ -0.58
ATP7B-206ENST00000448424 TERF2IPQ9NYB0 399 aa11.41□□□□□ -0.58
ATP7B-206ENST00000448424 NECTIN2Q92692 538 aa11.41□□□□□ -0.58
ATP7B-206ENST00000448424 CCDC34Q96HJ3 373 aa11.4□□□□□ -0.58
ATP7B-206ENST00000448424 SMARCA4P51532 1647 aa11.4□□□□□ -0.58
ATP7B-206ENST00000448424 IBSPP21815 317 aaPredicted RBP11.4□□□□□ -0.58
ATP7B-206ENST00000448424 FYB1O15117 783 aa11.4□□□□□ -0.59
ATP7B-206ENST00000448424 MPHOSPH9Q99550 1183 aa11.4□□□□□ -0.59
ATP7B-206ENST00000448424 STK31Q9BXU1 1019 aa11.4□□□□□ -0.59
ATP7B-206ENST00000448424 GAPVD1Q14C86 1478 aa11.4□□□□□ -0.59
ATP7B-206ENST00000448424 MYO15BQ96JP2 1530 aa11.39□□□□□ -0.59
ATP7B-206ENST00000448424 ELL2O00472 640 aaPredicted RBP11.39□□□□□ -0.59
ATP7B-206ENST00000448424 AKAP17AQ02040 695 aaKnown RBP11.39□□□□□ -0.59
ATP7B-206ENST00000448424 PSME1Q06323 249 aa11.39□□□□□ -0.59
ATP7B-206ENST00000448424 EIF3AQ14152 1382 aaKnown RBP11.39□□□□□ -0.59
ATP7B-206ENST00000448424 KIF16BQ96L93 1317 aa11.39□□□□□ -0.59
ATP7B-206ENST00000448424 FAM184AQ8NB25 1140 aa11.38□□□□□ -0.59
ATP7B-206ENST00000448424 RAD54L2Q9Y4B4 1467 aa11.38□□□□□ -0.59
ATP7B-206ENST00000448424 SMC4Q9NTJ3 1288 aa11.38□□□□□ -0.59
ATP7B-206ENST00000448424 APPP05067 770 aa11.38□□□□□ -0.59
ATP7B-206ENST00000448424 PIP4K2BP78356 416 aa11.38□□□□□ -0.59
ATP7B-206ENST00000448424 TPM2P07951 284 aa11.37□□□□□ -0.59
ATP7B-206ENST00000448424 TTLL5Q6EMB2 1281 aa11.37□□□□□ -0.59
ATP7B-206ENST00000448424 IPO8O15397 1037 aaKnown RBP11.36□□□□□ -0.59
ATP7B-206ENST00000448424 PPP1R1BQ9UD71 204 aaPredicted RBP11.36□□□□□ -0.59
ATP7B-206ENST00000448424 TIMELESSQ9UNS1 1208 aa11.36□□□□□ -0.59
ATP7B-206ENST00000448424 CT47A1Q5JQC4 288 aaPredicted RBP11.36□□□□□ -0.59
ATP7B-206ENST00000448424 GOLGA6L19H0YKK7 550 aa11.36□□□□□ -0.59
ATP7B-206ENST00000448424 CCDC43Q96MW1 224 aaKnown RBP11.36□□□□□ -0.59
ATP7B-206ENST00000448424 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
ATP7B-206ENST00000448424 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
ATP7B-206ENST00000448424 ODF2Q5BJF6 829 aa11.35□□□□□ -0.59
ATP7B-206ENST00000448424 RRP7AQ9Y3A4 280 aaKnown RBP11.35□□□□□ -0.59
ATP7B-206ENST00000448424 BECN2A8MW95 431 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 1683.5 ms