RNA–Protein interactions for RNA: ENST00000441134.5

GARNL3-207, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-207ENST00000441134 SPRYD3Q8NCJ5 442 aa8.33□□□□□ -1.08
GARNL3-207ENST00000441134 NBPF3Q9H094 633 aa8.33□□□□□ -1.08
GARNL3-207ENST00000441134 PTPN5P54829 565 aa8.31□□□□□ -1.08
GARNL3-207ENST00000441134 THSD4Q6ZMP0 1018 aa8.3□□□□□ -1.08
GARNL3-207ENST00000441134 WNT2BQ93097 391 aa8.3□□□□□ -1.08
GARNL3-207ENST00000441134 EPAS1Q99814 870 aa8.3□□□□□ -1.08
GARNL3-207ENST00000441134 RTN4Q9NQC3 1192 aaKnown RBP8.29□□□□□ -1.08
GARNL3-207ENST00000441134 COL9A1P20849 921 aa8.28□□□□□ -1.08
GARNL3-207ENST00000441134 RABGEF1Q9UJ41 708 aa8.28□□□□□ -1.08
GARNL3-207ENST00000441134 PROX2Q3B8N5 592 aa8.27□□□□□ -1.09
GARNL3-207ENST00000441134 RB1CC1Q8TDY2 1594 aa8.27□□□□□ -1.09
GARNL3-207ENST00000441134 C6orf132Q5T0Z8 1188 aa8.25□□□□□ -1.09
GARNL3-207ENST00000441134 PAXIP1Q6ZW49 1069 aaPredicted RBP8.25□□□□□ -1.09
GARNL3-207ENST00000441134 DDX12PQ92771 950 aa8.25□□□□□ -1.09
GARNL3-207ENST00000441134 CFAP44Q96MT7 982 aa8.25□□□□□ -1.09
GARNL3-207ENST00000441134 PDIA6Q15084 440 aa8.24□□□□□ -1.09
GARNL3-207ENST00000441134 RBM33Q96EV2 1170 aaKnown RBP8.24□□□□□ -1.09
GARNL3-207ENST00000441134 SPDYE16A6NNV3 312 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-207ENST00000441134 ONECUT3O60422 494 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-207ENST00000441134 LAPTM4BQ86VI4 370 aa8.23□□□□□ -1.09
GARNL3-207ENST00000441134 ANKK1Q8NFD2 765 aa8.23□□□□□ -1.09
GARNL3-207ENST00000441134 NBR1Q14596 966 aa8.22□□□□□ -1.09
GARNL3-207ENST00000441134 E2F4Q16254 413 aa8.22□□□□□ -1.09
GARNL3-207ENST00000441134 WDR70Q9NW82 654 aa8.22□□□□□ -1.09
GARNL3-207ENST00000441134 KIAA1468Q9P260 1216 aa8.22□□□□□ -1.09
GARNL3-207ENST00000441134 TRIM6-TRIM34B2RNG4 842 aa8.2□□□□□ -1.1
GARNL3-207ENST00000441134 EN1Q05925 392 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-207ENST00000441134 MAP3K7O43318 606 aa8.19□□□□□ -1.1
GARNL3-207ENST00000441134 IFFO2Q5TF58 517 aa8.19□□□□□ -1.1
GARNL3-207ENST00000441134 ZFRQ96KR1 1074 aaKnown RBP8.18□□□□□ -1.1
GARNL3-207ENST00000441134 SEPT9Q9UHD8 586 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-207ENST00000441134 ARIH1Q9Y4X5 557 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-207ENST00000441134 SOWAHBA6NEL2 793 aa8.17□□□□□ -1.1
GARNL3-207ENST00000441134 BCAMP50895 628 aa8.17□□□□□ -1.1
GARNL3-207ENST00000441134 FAM98CQ17RN3 349 aaKnown RBP8.16□□□□□ -1.1
GARNL3-207ENST00000441134 TSR1Q2NL82 804 aaKnown RBP8.16□□□□□ -1.1
GARNL3-207ENST00000441134 GRXCR2A6NFK2 248 aa8.14□□□□□ -1.11
GARNL3-207ENST00000441134 NYAP1Q6ZVC0 841 aa8.14□□□□□ -1.11
GARNL3-207ENST00000441134 PACS2Q86VP3 889 aa8.14□□□□□ -1.11
GARNL3-207ENST00000441134 A0A0G2JS52 829 aa8.13□□□□□ -1.11
GARNL3-207ENST00000441134 TSKSQ9UJT2 592 aa8.13□□□□□ -1.11
GARNL3-207ENST00000441134 RGS20O76081 388 aa8.12□□□□□ -1.11
GARNL3-207ENST00000441134 CERKQ8TCT0 537 aa8.12□□□□□ -1.11
GARNL3-207ENST00000441134 LRCH3Q96II8 777 aa8.12□□□□□ -1.11
GARNL3-207ENST00000441134 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.12□□□□□ -1.11
GARNL3-207ENST00000441134 WBP1LQ9NX94 342 aa8.11□□□□□ -1.11
GARNL3-207ENST00000441134 CECR2Q9BXF3 1484 aa8.11□□□□□ -1.11
GARNL3-207ENST00000441134 UNC13AQ9UPW8 1703 aa8.1□□□□□ -1.11
GARNL3-207ENST00000441134 ITGBL1O95965 494 aaPredicted RBP8.1□□□□□ -1.11
GARNL3-207ENST00000441134 PRSS12P56730 875 aa8.1□□□□□ -1.11
GARNL3-207ENST00000441134 CDCA7LQ96GN5 454 aa8.1□□□□□ -1.11
GARNL3-207ENST00000441134 PRIM1P49642 420 aaKnown RBP8.09□□□□□ -1.11
GARNL3-207ENST00000441134 TSR3Q9UJK0 312 aaKnown RBP8.09□□□□□ -1.11
GARNL3-207ENST00000441134 HPS5Q9UPZ3 1129 aa8.09□□□□□ -1.11
GARNL3-207ENST00000441134 BICRAQ9NZM4 1560 aa8.08□□□□□ -1.12
GARNL3-207ENST00000441134 NBPF26B4DH59 902 aa8.07□□□□□ -1.12
GARNL3-207ENST00000441134 OSBPP22059 807 aa8.07□□□□□ -1.12
GARNL3-207ENST00000441134 NACADO15069 1562 aa8.06□□□□□ -1.12
GARNL3-207ENST00000441134 SMAPO00193 183 aa8.06□□□□□ -1.12
GARNL3-207ENST00000441134 CDHR5Q9HBB8 845 aa8.06□□□□□ -1.12
GARNL3-207ENST00000441134 FAM198AQ9UFP1 575 aa8.06□□□□□ -1.12
GARNL3-207ENST00000441134 CC2D2AQ9P2K1 1620 aa8.06□□□□□ -1.12
GARNL3-207ENST00000441134 KCNC4Q03721 635 aa8.05□□□□□ -1.12
GARNL3-207ENST00000441134 TATDN2Q93075 761 aa8.05□□□□□ -1.12
GARNL3-207ENST00000441134 RBM27Q9P2N5 1060 aaKnown RBP8.05□□□□□ -1.12
GARNL3-207ENST00000441134 PNMA3Q9UL41 463 aa8.05□□□□□ -1.12
GARNL3-207ENST00000441134 PPP4CP60510 307 aa8.04□□□□□ -1.12
GARNL3-207ENST00000441134 SAMD7Q7Z3H4 446 aa8.04□□□□□ -1.12
GARNL3-207ENST00000441134 TSHZ2Q9NRE2 1034 aa8.03□□□□□ -1.12
GARNL3-207ENST00000441134 ARHGEF1Q92888 912 aaKnown RBP8.02□□□□□ -1.13
GARNL3-207ENST00000441134 C3orf80F5H4A9 247 aa8.01□□□□□ -1.13
GARNL3-207ENST00000441134 NUDT18Q6ZVK8 323 aa8.01□□□□□ -1.13
GARNL3-207ENST00000441134 HDGFP51858 240 aaKnown RBP8□□□□□ -1.13
GARNL3-207ENST00000441134 IRX2Q9BZI1 471 aaPredicted RBP8□□□□□ -1.13
GARNL3-207ENST00000441134 PADI6Q6TGC4 694 aa7.99□□□□□ -1.13
GARNL3-207ENST00000441134 KCNV2Q8TDN2 545 aa7.99□□□□□ -1.13
GARNL3-207ENST00000441134 RNF40O75150 1001 aa7.98□□□□□ -1.13
GARNL3-207ENST00000441134 TTC13Q8NBP0 860 aa7.98□□□□□ -1.13
GARNL3-207ENST00000441134 NPDC1Q9NQX5 325 aaPredicted RBP7.98□□□□□ -1.13
GARNL3-207ENST00000441134 MLLT3P42568 568 aaPredicted RBP7.96□□□□□ -1.14
GARNL3-207ENST00000441134 NECTIN2Q92692 538 aa7.96□□□□□ -1.14
GARNL3-207ENST00000441134 TJAP1Q5JTD0 557 aa7.95□□□□□ -1.14
GARNL3-207ENST00000441134 P3H3Q8IVL6 736 aa7.95□□□□□ -1.14
GARNL3-207ENST00000441134 MTRQ99707 1265 aa7.94□□□□□ -1.14
GARNL3-207ENST00000441134 IL21Q9HBE4 155 aa7.94□□□□□ -1.14
GARNL3-207ENST00000441134 SLC4A3P48751 1232 aa7.93□□□□□ -1.14
GARNL3-207ENST00000441134 SWT1Q5T5J6 900 aaKnown RBP7.93□□□□□ -1.14
GARNL3-207ENST00000441134 SLF2Q8IX21 1173 aa7.93□□□□□ -1.14
GARNL3-207ENST00000441134 CUX2O14529 1486 aa7.92□□□□□ -1.14
GARNL3-207ENST00000441134 EIF4G1Q04637 1599 aaKnown RBP7.92□□□□□ -1.14
GARNL3-207ENST00000441134 APLP1P51693 650 aa7.91□□□□□ -1.14
GARNL3-207ENST00000441134 EYA1Q99502 592 aa7.91□□□□□ -1.14
GARNL3-207ENST00000441134 PTGDRQ13258 359 aa7.9□□□□□ -1.14
GARNL3-207ENST00000441134 NUTM2FA1L443 756 aa7.88□□□□□ -1.15
GARNL3-207ENST00000441134 RBM46Q8TBY0 533 aaKnown RBP7.88□□□□□ -1.15
GARNL3-207ENST00000441134 SHROOM4Q9ULL8 1493 aa7.87□□□□□ -1.15
GARNL3-207ENST00000441134 DNAJB2P25686 324 aa7.87□□□□□ -1.15
GARNL3-207ENST00000441134 ZNF516Q92618 1163 aa7.87□□□□□ -1.15
GARNL3-207ENST00000441134 PRR14Q9BWN1 585 aa7.87□□□□□ -1.15
GARNL3-207ENST00000441134 PPP1R18Q6NYC8 613 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms