RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 SLC24A3Q9HC58 644 aa8.33□□□□□ -1.08
LSM1P1-201ENST00000438629 MAP2K5Q13163 448 aa8.31□□□□□ -1.08
LSM1P1-201ENST00000438629 KCNH8Q96L42 1107 aa8.31□□□□□ -1.08
LSM1P1-201ENST00000438629 ADAM33Q9BZ11 813 aa8.31□□□□□ -1.08
LSM1P1-201ENST00000438629 BCL2L12Q9HB09 334 aa8.31□□□□□ -1.08
LSM1P1-201ENST00000438629 ST18O60284 1047 aa8.3□□□□□ -1.08
LSM1P1-201ENST00000438629 PTPREP23469 700 aa8.3□□□□□ -1.08
LSM1P1-201ENST00000438629 NPDC1Q9NQX5 325 aaPredicted RBP8.3□□□□□ -1.08
LSM1P1-201ENST00000438629 ERBB3P21860 1342 aa8.29□□□□□ -1.08
LSM1P1-201ENST00000438629 IRF6O14896 467 aa8.29□□□□□ -1.08
LSM1P1-201ENST00000438629 TSR1Q2NL82 804 aaKnown RBP8.29□□□□□ -1.08
LSM1P1-201ENST00000438629 FAM163AQ96GL9 167 aaPredicted RBP8.28□□□□□ -1.08
LSM1P1-201ENST00000438629 CDHR5Q9HBB8 845 aa8.28□□□□□ -1.08
LSM1P1-201ENST00000438629 RBM27Q9P2N5 1060 aaKnown RBP8.28□□□□□ -1.08
LSM1P1-201ENST00000438629 EMP3P54852 163 aa8.27□□□□□ -1.09
LSM1P1-201ENST00000438629 PPP1R3GB7ZBB8 358 aa8.24□□□□□ -1.09
LSM1P1-201ENST00000438629 TRIM66O15016 1216 aa8.24□□□□□ -1.09
LSM1P1-201ENST00000438629 OATP04181 439 aa8.24□□□□□ -1.09
LSM1P1-201ENST00000438629 FECHP22830 423 aa8.24□□□□□ -1.09
LSM1P1-201ENST00000438629 PRSS12P56730 875 aa8.24□□□□□ -1.09
LSM1P1-201ENST00000438629 DAXXQ9UER7 740 aaPredicted RBP8.24□□□□□ -1.09
LSM1P1-201ENST00000438629 VARS2Q5ST30 1063 aaKnown RBP8.23□□□□□ -1.09
LSM1P1-201ENST00000438629 CCDC102AQ96A19 550 aa8.23□□□□□ -1.09
LSM1P1-201ENST00000438629 ONECUT3O60422 494 aaPredicted RBP8.22□□□□□ -1.09
LSM1P1-201ENST00000438629 PBX2P40425 430 aa8.22□□□□□ -1.09
LSM1P1-201ENST00000438629 NEUROD2Q15784 382 aa8.22□□□□□ -1.09
LSM1P1-201ENST00000438629 CDCA7LQ96GN5 454 aa8.22□□□□□ -1.09
LSM1P1-201ENST00000438629 ARHGAP33O14559 1287 aa8.21□□□□□ -1.1
LSM1P1-201ENST00000438629 PADI6Q6TGC4 694 aa8.21□□□□□ -1.1
LSM1P1-201ENST00000438629 PACS2Q86VP3 889 aa8.21□□□□□ -1.1
LSM1P1-201ENST00000438629 ZNF687Q8N1G0 1237 aa8.21□□□□□ -1.1
LSM1P1-201ENST00000438629 MARVELD3Q96A59 401 aa8.21□□□□□ -1.1
LSM1P1-201ENST00000438629 KCNK17Q96T54 332 aa8.21□□□□□ -1.1
LSM1P1-201ENST00000438629 FAM205CA6NFA0 338 aa8.2□□□□□ -1.1
LSM1P1-201ENST00000438629 COL9A1P20849 921 aa8.2□□□□□ -1.1
LSM1P1-201ENST00000438629 BRPF1P55201 1214 aaPredicted RBP8.2□□□□□ -1.1
LSM1P1-201ENST00000438629 PDE4DQ08499 809 aa8.2□□□□□ -1.1
LSM1P1-201ENST00000438629 TTC13Q8NBP0 860 aa8.2□□□□□ -1.1
LSM1P1-201ENST00000438629 AMHR2Q16671 573 aa8.19□□□□□ -1.1
LSM1P1-201ENST00000438629 RBM46Q8TBY0 533 aaKnown RBP8.19□□□□□ -1.1
LSM1P1-201ENST00000438629 TRIM6-TRIM34B2RNG4 842 aa8.18□□□□□ -1.1
LSM1P1-201ENST00000438629 SLC4A5Q9BY07 1137 aa8.18□□□□□ -1.1
LSM1P1-201ENST00000438629 ADGRG1Q9Y653 693 aa8.17□□□□□ -1.1
LSM1P1-201ENST00000438629 NBPF26B4DH59 902 aa8.16□□□□□ -1.1
LSM1P1-201ENST00000438629 HS3ST6Q96QI5 342 aa8.16□□□□□ -1.1
LSM1P1-201ENST00000438629 CLCN1P35523 988 aa8.15□□□□□ -1.1
LSM1P1-201ENST00000438629 TMEM132AQ24JP5 1023 aa8.15□□□□□ -1.1
LSM1P1-201ENST00000438629 METTL3Q86U44 580 aaKnown RBP8.15□□□□□ -1.1
LSM1P1-201ENST00000438629 PXYLP1Q8TE99 480 aa8.15□□□□□ -1.1
LSM1P1-201ENST00000438629 ZBED2Q9BTP6 218 aa8.15□□□□□ -1.1
LSM1P1-201ENST00000438629 PSEN2P49810 448 aa8.14□□□□□ -1.11
LSM1P1-201ENST00000438629 TTLL12Q14166 644 aaPredicted RBP8.14□□□□□ -1.11
LSM1P1-201ENST00000438629 TSKSQ9UJT2 592 aa8.14□□□□□ -1.11
LSM1P1-201ENST00000438629 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.13□□□□□ -1.11
LSM1P1-201ENST00000438629 TATDN2Q93075 761 aa8.13□□□□□ -1.11
LSM1P1-201ENST00000438629 KDM4CQ9H3R0 1056 aa8.13□□□□□ -1.11
LSM1P1-201ENST00000438629 RABGEF1Q9UJ41 708 aa8.13□□□□□ -1.11
LSM1P1-201ENST00000438629 NUDT18Q6ZVK8 323 aa8.12□□□□□ -1.11
LSM1P1-201ENST00000438629 EYA1Q99502 592 aa8.12□□□□□ -1.11
LSM1P1-201ENST00000438629 GPCPD1Q9NPB8 672 aa8.12□□□□□ -1.11
LSM1P1-201ENST00000438629 KIAA1468Q9P260 1216 aa8.12□□□□□ -1.11
LSM1P1-201ENST00000438629 FAM198AQ9UFP1 575 aa8.12□□□□□ -1.11
LSM1P1-201ENST00000438629 PNMA3Q9UL41 463 aa8.12□□□□□ -1.11
LSM1P1-201ENST00000438629 TK2O00142 265 aa8.11□□□□□ -1.11
LSM1P1-201ENST00000438629 FAM161AQ3B820 660 aa8.11□□□□□ -1.11
LSM1P1-201ENST00000438629 PROX2Q3B8N5 592 aa8.11□□□□□ -1.11
LSM1P1-201ENST00000438629 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
LSM1P1-201ENST00000438629 AXIN2Q9Y2T1 843 aa8.11□□□□□ -1.11
LSM1P1-201ENST00000438629 HDGFP51858 240 aaKnown RBP8.1□□□□□ -1.11
LSM1P1-201ENST00000438629 MDM2Q00987 491 aaPredicted RBP8.1□□□□□ -1.11
LSM1P1-201ENST00000438629 POTEEQ6S8J3 1075 aa8.1□□□□□ -1.11
LSM1P1-201ENST00000438629 PARP9Q8IXQ6 854 aa8.1□□□□□ -1.11
LSM1P1-201ENST00000438629 DDRGK1Q96HY6 314 aa8.1□□□□□ -1.11
LSM1P1-201ENST00000438629 GPBP1L1Q9HC44 474 aaPredicted RBP8.1□□□□□ -1.11
LSM1P1-201ENST00000438629 DNAJB2P25686 324 aa8.09□□□□□ -1.11
LSM1P1-201ENST00000438629 DMRTA1Q5VZB9 504 aa8.09□□□□□ -1.11
LSM1P1-201ENST00000438629 PHOX2BQ99453 314 aa8.09□□□□□ -1.11
LSM1P1-201ENST00000438629 NBPF3Q9H094 633 aa8.09□□□□□ -1.11
LSM1P1-201ENST00000438629 VPS9D1Q9Y2B5 631 aa8.09□□□□□ -1.11
LSM1P1-201ENST00000438629 POTEB3A0JP26 581 aa8.08□□□□□ -1.12
LSM1P1-201ENST00000438629 RCCD1A6NED2 376 aa8.08□□□□□ -1.12
LSM1P1-201ENST00000438629 POTEBQ6S5H4 581 aa8.08□□□□□ -1.12
LSM1P1-201ENST00000438629 GIGYF2Q6Y7W6 1299 aaKnown RBP8.08□□□□□ -1.12
LSM1P1-201ENST00000438629 TMUB1Q9BVT8 246 aa8.08□□□□□ -1.12
LSM1P1-201ENST00000438629 SLC4A3P48751 1232 aa8.07□□□□□ -1.12
LSM1P1-201ENST00000438629 LSM11P83369 360 aaKnown RBP eCLIP8.07□□□□□ -1.12
LSM1P1-201ENST00000438629 RSPH4AQ5TD94 716 aa8.07□□□□□ -1.12
LSM1P1-201ENST00000438629 LAPTM4BQ86VI4 370 aa8.07□□□□□ -1.12
LSM1P1-201ENST00000438629 STAC3Q96MF2 364 aa8.07□□□□□ -1.12
LSM1P1-201ENST00000438629 SSTR3P32745 418 aaPredicted RBP8.06□□□□□ -1.12
LSM1P1-201ENST00000438629 SULF1Q8IWU6 871 aa8.06□□□□□ -1.12
LSM1P1-201ENST00000438629 FAM98CQ17RN3 349 aaKnown RBP8.05□□□□□ -1.12
LSM1P1-201ENST00000438629 IL27Q8NEV9 243 aa8.05□□□□□ -1.12
LSM1P1-201ENST00000438629 REPIN1Q9BWE0 567 aaKnown RBP8.04□□□□□ -1.12
LSM1P1-201ENST00000438629 TMEM134Q9H6X4 195 aa8.04□□□□□ -1.12
LSM1P1-201ENST00000438629 FAM217BQ9NTX9 383 aaPredicted RBP8.04□□□□□ -1.12
LSM1P1-201ENST00000438629 BHMG1C9JSJ3 638 aaPredicted RBP8.03□□□□□ -1.12
LSM1P1-201ENST00000438629 SMAPO00193 183 aa8.03□□□□□ -1.12
LSM1P1-201ENST00000438629 ADGRD1Q6QNK2 874 aa8.03□□□□□ -1.12
LSM1P1-201ENST00000438629 MRPL50Q8N5N7 158 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms