RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 RXRBP28702 533 aa19.53■□□□□ 0.72
RTN4-211ENST00000438462 TNRQ92752 1358 aa19.51■□□□□ 0.71
RTN4-211ENST00000438462 MEX3CQ5U5Q3 659 aaKnown RBP19.5■□□□□ 0.71
RTN4-211ENST00000438462 UGGT1Q9NYU2 1555 aa19.49■□□□□ 0.71
RTN4-211ENST00000438462 SAMD9LQ8IVG5 1584 aa19.49■□□□□ 0.71
RTN4-211ENST00000438462 RGS12O14924 1447 aa19.48■□□□□ 0.71
RTN4-211ENST00000438462 FAM135AQ9P2D6 1515 aa19.47■□□□□ 0.71
RTN4-211ENST00000438462 FOXD1Q16676 465 aa19.47■□□□□ 0.71
RTN4-211ENST00000438462 PREX2Q70Z35 1606 aa19.47■□□□□ 0.71
RTN4-211ENST00000438462 LRP5O75197 1615 aa19.45■□□□□ 0.7
RTN4-211ENST00000438462 COL16A1Q07092 1604 aaPredicted RBP19.45■□□□□ 0.7
RTN4-211ENST00000438462 GGT6Q6P531 493 aa19.45■□□□□ 0.7
RTN4-211ENST00000438462 LRRC9Q6ZRR7 1453 aa19.44■□□□□ 0.7
RTN4-211ENST00000438462 THEMISQ8N1K5 641 aaPredicted RBP19.44■□□□□ 0.7
RTN4-211ENST00000438462 KDM5DQ9BY66 1539 aa19.43■□□□□ 0.7
RTN4-211ENST00000438462 A2MP01023 1474 aa19.41■□□□□ 0.7
RTN4-211ENST00000438462 RANGAP1P46060 587 aaPredicted RBP19.41■□□□□ 0.7
RTN4-211ENST00000438462 FBXO31Q5XUX0 539 aaPredicted RBP19.41■□□□□ 0.7
RTN4-211ENST00000438462 ATP7AQ04656 1500 aa19.41■□□□□ 0.7
RTN4-211ENST00000438462 NLRP1Q9C000 1473 aa19.4■□□□□ 0.7
RTN4-211ENST00000438462 NUTM2BA6NNL0 878 aaPredicted RBP19.39■□□□□ 0.69
RTN4-211ENST00000438462 NUTM2EB1AL46 878 aaPredicted RBP19.39■□□□□ 0.69
RTN4-211ENST00000438462 NUTM2DQ5VT03 806 aaPredicted RBP19.39■□□□□ 0.69
RTN4-211ENST00000438462 NUTM2AQ8IVF1 878 aaPredicted RBP19.39■□□□□ 0.69
RTN4-211ENST00000438462 SPATA31A6Q5VVP1 1343 aa19.39■□□□□ 0.69
RTN4-211ENST00000438462 PZPP20742 1482 aa19.39■□□□□ 0.69
RTN4-211ENST00000438462 MAP3K1Q13233 1512 aa19.38■□□□□ 0.69
RTN4-211ENST00000438462 INO80Q9ULG1 1556 aaPredicted RBP19.37■□□□□ 0.69
RTN4-211ENST00000438462 SHPRHQ149N8 1683 aa19.36■□□□□ 0.69
RTN4-211ENST00000438462 TROQ12816 1431 aaPredicted RBP19.35■□□□□ 0.69
RTN4-211ENST00000438462 TMEM94Q12767 1356 aa19.34■□□□□ 0.69
RTN4-211ENST00000438462 ATAD2Q6PL18 1390 aa19.34■□□□□ 0.69
RTN4-211ENST00000438462 FGD6Q6ZV73 1430 aa19.34■□□□□ 0.69
RTN4-211ENST00000438462 SPAG9O60271 1321 aaKnown RBP19.33■□□□□ 0.69
RTN4-211ENST00000438462 SYCP2Q9BX26 1530 aa19.33■□□□□ 0.68
RTN4-211ENST00000438462 CLIP1P30622 1438 aa19.32■□□□□ 0.68
RTN4-211ENST00000438462 MIA2Q96PC5 1412 aa19.31■□□□□ 0.68
RTN4-211ENST00000438462 ADGBQ8N7X0 1667 aa19.3■□□□□ 0.68
RTN4-211ENST00000438462 SCAF11Q99590 1463 aaKnown RBP19.28■□□□□ 0.68
RTN4-211ENST00000438462 CDC42BPAQ5VT25 1732 aa19.28■□□□□ 0.68
RTN4-211ENST00000438462 AFF2P51816 1311 aa19.28■□□□□ 0.68
RTN4-211ENST00000438462 TIAM1Q13009 1591 aa19.27■□□□□ 0.68
RTN4-211ENST00000438462 CDK11AQ9UQ88 783 aaPredicted RBP19.27■□□□□ 0.68
RTN4-211ENST00000438462 EP400Q96L91 3159 aa19.25■□□□□ 0.67
RTN4-211ENST00000438462 RBM6P78332 1123 aaKnown RBP19.23■□□□□ 0.67
RTN4-211ENST00000438462 ATP1B4Q9UN42 357 aaPredicted RBP19.23■□□□□ 0.67
RTN4-211ENST00000438462 UBR1Q8IWV7 1749 aa19.22■□□□□ 0.67
RTN4-211ENST00000438462 YY1P25490 414 aa19.21■□□□□ 0.67
RTN4-211ENST00000438462 LRRIQ1Q96JM4 1722 aa19.21■□□□□ 0.67
RTN4-211ENST00000438462 NHSL1Q5SYE7 1610 aa19.19■□□□□ 0.66
RTN4-211ENST00000438462 AHDC1Q5TGY3 1603 aaPredicted RBP19.19■□□□□ 0.66
RTN4-211ENST00000438462 SLAIN2Q9P270 581 aa19.19■□□□□ 0.66
RTN4-211ENST00000438462 NWD1Q149M9 1564 aa19.19■□□□□ 0.66
RTN4-211ENST00000438462 PRDM15P57071 1507 aaPredicted RBP19.18■□□□□ 0.66
RTN4-211ENST00000438462 MSH6P52701 1360 aa19.18■□□□□ 0.66
RTN4-211ENST00000438462 QTRT2Q9H974 415 aaKnown RBP19.17■□□□□ 0.66
RTN4-211ENST00000438462 DIP2AQ14689 1571 aa19.17■□□□□ 0.66
RTN4-211ENST00000438462 KDM5AP29375 1690 aaKnown RBP19.15■□□□□ 0.66
RTN4-211ENST00000438462 ZNF777Q9ULD5 760 aaPredicted RBP19.15■□□□□ 0.66
RTN4-211ENST00000438462 HNRNPMP52272 730 aaKnown RBP eCLIP19.14■□□□□ 0.657e-7■■■■□ 22.8
RTN4-211ENST00000438462 PROSER2Q86WR7 435 aaPredicted RBP19.14■□□□□ 0.65
RTN4-211ENST00000438462 ARHGAP23Q9P227 1491 aa19.14■□□□□ 0.65
RTN4-211ENST00000438462 LTKP29376 864 aa19.13■□□□□ 0.65
RTN4-211ENST00000438462 NCOA2Q15596 1464 aa19.13■□□□□ 0.65
RTN4-211ENST00000438462 ABCC3O15438 1527 aa19.13■□□□□ 0.65
RTN4-211ENST00000438462 SLIT1O75093 1534 aa19.13■□□□□ 0.65
RTN4-211ENST00000438462 NKTRP30414 1462 aaKnown RBP19.12■□□□□ 0.65
RTN4-211ENST00000438462 CCDC125Q86Z20 511 aa19.1■□□□□ 0.65
RTN4-211ENST00000438462 C8orf37Q96NL8 207 aa19.1■□□□□ 0.65
RTN4-211ENST00000438462 WASHC2CQ9Y4E1 1318 aa19.09■□□□□ 0.65
RTN4-211ENST00000438462 TXNDC2Q86VQ3 553 aa19.09■□□□□ 0.65
RTN4-211ENST00000438462 NGLY1Q96IV0 654 aa19.09■□□□□ 0.65
RTN4-211ENST00000438462 KCNA6P17658 529 aa19.08■□□□□ 0.64
RTN4-211ENST00000438462 FMN1Q68DA7 1419 aa19.08■□□□□ 0.64
RTN4-211ENST00000438462 ERVK-7P63135 1459 aa19.06■□□□□ 0.64
RTN4-211ENST00000438462 SENP3-EIF4A1A0A087X0R7 540 aa19.06■□□□□ 0.64
RTN4-211ENST00000438462 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
RTN4-211ENST00000438462 KIAA1107Q9UPP5 1409 aa19.05■□□□□ 0.64
RTN4-211ENST00000438462 KIF3BO15066 747 aa19.04■□□□□ 0.64
RTN4-211ENST00000438462 DHX29Q7Z478 1369 aaKnown RBP19.04■□□□□ 0.64
RTN4-211ENST00000438462 PLEKHH2Q8IVE3 1493 aa19.03■□□□□ 0.64
RTN4-211ENST00000438462 MAST1Q9Y2H9 1570 aa19.01■□□□□ 0.63
RTN4-211ENST00000438462 BCL9LQ86UU0 1499 aa19■□□□□ 0.63
RTN4-211ENST00000438462 PSDA5PKW4 1024 aaPredicted RBP18.99■□□□□ 0.63
RTN4-211ENST00000438462 HRCP23327 699 aa18.99■□□□□ 0.63
RTN4-211ENST00000438462 EID1Q9Y6B2 187 aa18.99■□□□□ 0.63
RTN4-211ENST00000438462 GPATCH8Q9UKJ3 1502 aaKnown RBP18.99■□□□□ 0.63
RTN4-211ENST00000438462 BLMP54132 1417 aaPredicted RBP18.99■□□□□ 0.63
RTN4-211ENST00000438462 DEFB132Q7Z7B7 95 aa18.98■□□□□ 0.63
RTN4-211ENST00000438462 TET3O43151 1660 aa18.96■□□□□ 0.63
RTN4-211ENST00000438462 SLC26A8Q96RN1 970 aa18.94■□□□□ 0.62
RTN4-211ENST00000438462 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.94■□□□□ 0.62
RTN4-211ENST00000438462 RTEL1-TNFRSF6BF6WH68 1400 aa18.93■□□□□ 0.62
RTN4-211ENST00000438462 SETD5Q9C0A6 1442 aa18.93■□□□□ 0.62
RTN4-211ENST00000438462 CSRNP3Q8WYN3 585 aa18.93■□□□□ 0.62
RTN4-211ENST00000438462 CFAP65Q6ZU64 1925 aaKnown RBP18.93■□□□□ 0.62
RTN4-211ENST00000438462 CAMSAP2Q08AD1 1489 aa18.92■□□□□ 0.62
RTN4-211ENST00000438462 PIK3C2BO00750 1634 aa18.92■□□□□ 0.62
RTN4-211ENST00000438462 TMEM2Q9UHN6 1383 aa18.91■□□□□ 0.62
RTN4-211ENST00000438462 TRPC5Q9UL62 973 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms