RNA–Protein interactions for RNA: ENST00000437232.5

VIM-AS1-201, VIM antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VIM-AS1, Length 1,351 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-201ENST00000437232 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
VIM-AS1-201ENST00000437232 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
VIM-AS1-201ENST00000437232 PPP1R3GB7ZBB8 358 aa11.67□□□□□ -0.54
VIM-AS1-201ENST00000437232 COL9A1P20849 921 aa11.67□□□□□ -0.54
VIM-AS1-201ENST00000437232 NBPF3Q9H094 633 aa11.67□□□□□ -0.54
VIM-AS1-201ENST00000437232 E2F4Q16254 413 aa11.66□□□□□ -0.54
VIM-AS1-201ENST00000437232 PROX2Q3B8N5 592 aa11.66□□□□□ -0.54
VIM-AS1-201ENST00000437232 THSD4Q6ZMP0 1018 aa11.66□□□□□ -0.54
VIM-AS1-201ENST00000437232 WNT2BQ93097 391 aa11.66□□□□□ -0.54
VIM-AS1-201ENST00000437232 DDX12PQ92771 950 aa11.63□□□□□ -0.55
VIM-AS1-201ENST00000437232 EPAS1Q99814 870 aa11.63□□□□□ -0.55
VIM-AS1-201ENST00000437232 PDIA6Q15084 440 aa11.61□□□□□ -0.55
VIM-AS1-201ENST00000437232 RABGEF1Q9UJ41 708 aa11.61□□□□□ -0.55
VIM-AS1-201ENST00000437232 SPDYE16A6NNV3 312 aaPredicted RBP11.6□□□□□ -0.55
VIM-AS1-201ENST00000437232 C6orf132Q5T0Z8 1188 aa11.6□□□□□ -0.55
VIM-AS1-201ENST00000437232 RBM33Q96EV2 1170 aaKnown RBP11.6□□□□□ -0.55
VIM-AS1-201ENST00000437232 NBR1Q14596 966 aa11.56□□□□□ -0.56
VIM-AS1-201ENST00000437232 KIAA1468Q9P260 1216 aa11.56□□□□□ -0.56
VIM-AS1-201ENST00000437232 TSHZ2Q9NRE2 1034 aa11.54□□□□□ -0.56
VIM-AS1-201ENST00000437232 ARIH1Q9Y4X5 557 aaPredicted RBP11.54□□□□□ -0.56
VIM-AS1-201ENST00000437232 ANKK1Q8NFD2 765 aa11.54□□□□□ -0.56
VIM-AS1-201ENST00000437232 MAP3K7O43318 606 aa11.52□□□□□ -0.57
VIM-AS1-201ENST00000437232 EN1Q05925 392 aaPredicted RBP11.52□□□□□ -0.57
VIM-AS1-201ENST00000437232 SEPT9Q9UHD8 586 aaPredicted RBP11.52□□□□□ -0.57
VIM-AS1-201ENST00000437232 TRIM6-TRIM34B2RNG4 842 aa11.51□□□□□ -0.57
VIM-AS1-201ENST00000437232 BCAMP50895 628 aa11.51□□□□□ -0.57
VIM-AS1-201ENST00000437232 LAPTM4BQ86VI4 370 aa11.51□□□□□ -0.57
VIM-AS1-201ENST00000437232 GRXCR2A6NFK2 248 aa11.5□□□□□ -0.57
VIM-AS1-201ENST00000437232 ONECUT3O60422 494 aaPredicted RBP11.5□□□□□ -0.57
VIM-AS1-201ENST00000437232 TSR1Q2NL82 804 aaKnown RBP11.5□□□□□ -0.57
VIM-AS1-201ENST00000437232 ZFRQ96KR1 1074 aaKnown RBP11.5□□□□□ -0.57
VIM-AS1-201ENST00000437232 SOWAHBA6NEL2 793 aa11.47□□□□□ -0.57
VIM-AS1-201ENST00000437232 IFFO2Q5TF58 517 aa11.45□□□□□ -0.58
VIM-AS1-201ENST00000437232 PRIM1P49642 420 aaKnown RBP11.43□□□□□ -0.58
VIM-AS1-201ENST00000437232 FAM98CQ17RN3 349 aaKnown RBP11.43□□□□□ -0.58
VIM-AS1-201ENST00000437232 TSKSQ9UJT2 592 aa11.43□□□□□ -0.58
VIM-AS1-201ENST00000437232 A0A0G2JS52 829 aa11.41□□□□□ -0.58
VIM-AS1-201ENST00000437232 WBP1LQ9NX94 342 aa11.41□□□□□ -0.58
VIM-AS1-201ENST00000437232 PACS2Q86VP3 889 aa11.41□□□□□ -0.58
VIM-AS1-201ENST00000437232 ARHGEF1Q92888 912 aaKnown RBP11.41□□□□□ -0.58
VIM-AS1-201ENST00000437232 OSBPP22059 807 aa11.4□□□□□ -0.59
VIM-AS1-201ENST00000437232 CERKQ8TCT0 537 aa11.4□□□□□ -0.59
VIM-AS1-201ENST00000437232 KCNV2Q8TDN2 545 aa11.39□□□□□ -0.59
VIM-AS1-201ENST00000437232 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
VIM-AS1-201ENST00000437232 LRCH3Q96II8 777 aa11.39□□□□□ -0.59
VIM-AS1-201ENST00000437232 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.39□□□□□ -0.59
VIM-AS1-201ENST00000437232 SMAPO00193 183 aa11.37□□□□□ -0.59
VIM-AS1-201ENST00000437232 ITGBL1O95965 494 aaPredicted RBP11.37□□□□□ -0.59
VIM-AS1-201ENST00000437232 PRSS12P56730 875 aa11.37□□□□□ -0.59
VIM-AS1-201ENST00000437232 NYAP1Q6ZVC0 841 aa11.37□□□□□ -0.59
VIM-AS1-201ENST00000437232 FAM198AQ9UFP1 575 aa11.37□□□□□ -0.59
VIM-AS1-201ENST00000437232 HPS5Q9UPZ3 1129 aa11.37□□□□□ -0.59
VIM-AS1-201ENST00000437232 CDHR5Q9HBB8 845 aa11.36□□□□□ -0.59
VIM-AS1-201ENST00000437232 TSR3Q9UJK0 312 aaKnown RBP11.36□□□□□ -0.59
VIM-AS1-201ENST00000437232 PLCB2Q00722 1185 aa11.35□□□□□ -0.59
VIM-AS1-201ENST00000437232 RGS20O76081 388 aa11.34□□□□□ -0.59
VIM-AS1-201ENST00000437232 P3H3Q8IVL6 736 aa11.34□□□□□ -0.59
VIM-AS1-201ENST00000437232 C3orf80F5H4A9 247 aa11.32□□□□□ -0.6
VIM-AS1-201ENST00000437232 PNMA3Q9UL41 463 aa11.31□□□□□ -0.6
VIM-AS1-201ENST00000437232 SAMD7Q7Z3H4 446 aa11.3□□□□□ -0.6
VIM-AS1-201ENST00000437232 TATDN2Q93075 761 aa11.3□□□□□ -0.6
VIM-AS1-201ENST00000437232 NBPF26B4DH59 902 aa11.29□□□□□ -0.6
VIM-AS1-201ENST00000437232 MLLT3P42568 568 aaPredicted RBP11.29□□□□□ -0.6
VIM-AS1-201ENST00000437232 KCNC4Q03721 635 aa11.29□□□□□ -0.6
VIM-AS1-201ENST00000437232 PPP4CP60510 307 aa11.28□□□□□ -0.6
VIM-AS1-201ENST00000437232 RBM27Q9P2N5 1060 aaKnown RBP11.28□□□□□ -0.6
VIM-AS1-201ENST00000437232 NUDT18Q6ZVK8 323 aa11.26□□□□□ -0.61
VIM-AS1-201ENST00000437232 NPDC1Q9NQX5 325 aaPredicted RBP11.25□□□□□ -0.61
VIM-AS1-201ENST00000437232 IRX2Q9BZI1 471 aaPredicted RBP11.24□□□□□ -0.61
VIM-AS1-201ENST00000437232 RNF40O75150 1001 aa11.23□□□□□ -0.61
VIM-AS1-201ENST00000437232 HDGFP51858 240 aaKnown RBP11.23□□□□□ -0.61
VIM-AS1-201ENST00000437232 PADI6Q6TGC4 694 aa11.23□□□□□ -0.61
VIM-AS1-201ENST00000437232 HAP1P54257 671 aaPredicted RBP11.21□□□□□ -0.61
VIM-AS1-201ENST00000437232 SEMA3EO15041 775 aa11.19□□□□□ -0.62
VIM-AS1-201ENST00000437232 TTC13Q8NBP0 860 aa11.19□□□□□ -0.62
VIM-AS1-201ENST00000437232 NUTM2FA1L443 756 aa11.18□□□□□ -0.62
VIM-AS1-201ENST00000437232 PTGDRQ13258 359 aa11.17□□□□□ -0.62
VIM-AS1-201ENST00000437232 TJAP1Q5JTD0 557 aa11.17□□□□□ -0.62
VIM-AS1-201ENST00000437232 MTRQ99707 1265 aa11.16□□□□□ -0.62
VIM-AS1-201ENST00000437232 SWT1Q5T5J6 900 aaKnown RBP11.16□□□□□ -0.62
VIM-AS1-201ENST00000437232 APLP1P51693 650 aa11.15□□□□□ -0.63
VIM-AS1-201ENST00000437232 IL21Q9HBE4 155 aa11.13□□□□□ -0.63
VIM-AS1-201ENST00000437232 SLC4A3P48751 1232 aa11.12□□□□□ -0.63
VIM-AS1-201ENST00000437232 EYA1Q99502 592 aa11.12□□□□□ -0.63
VIM-AS1-201ENST00000437232 SLF2Q8IX21 1173 aa11.11□□□□□ -0.63
VIM-AS1-201ENST00000437232 ZNF516Q92618 1163 aa11.11□□□□□ -0.63
VIM-AS1-201ENST00000437232 NECTIN2Q92692 538 aa11.11□□□□□ -0.63
VIM-AS1-201ENST00000437232 SMYD5Q6GMV2 418 aa11.1□□□□□ -0.63
VIM-AS1-201ENST00000437232 FCHSD2O94868 740 aa11.09□□□□□ -0.63
VIM-AS1-201ENST00000437232 TESPA1A2RU30 521 aaPredicted RBP11.08□□□□□ -0.64
VIM-AS1-201ENST00000437232 RBM46Q8TBY0 533 aaKnown RBP11.08□□□□□ -0.64
VIM-AS1-201ENST00000437232 COPS2P61201 443 aa11.06□□□□□ -0.64
VIM-AS1-201ENST00000437232 PPP1R18Q6NYC8 613 aa11.06□□□□□ -0.64
VIM-AS1-201ENST00000437232 ADGRG1Q9Y653 693 aa11.06□□□□□ -0.64
VIM-AS1-201ENST00000437232 DNAJB2P25686 324 aa11.05□□□□□ -0.64
VIM-AS1-201ENST00000437232 RBM26Q5T8P6 1007 aaKnown RBP11.05□□□□□ -0.64
VIM-AS1-201ENST00000437232 KDM2AQ9Y2K7 1162 aa11.05□□□□□ -0.64
VIM-AS1-201ENST00000437232 FAM161AQ3B820 660 aa11.04□□□□□ -0.64
VIM-AS1-201ENST00000437232 Q6ZNB5 142 aa11.03□□□□□ -0.64
VIM-AS1-201ENST00000437232 NKX2-3Q8TAU0 364 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms